| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300712
Identifier: 146300712
GI number: 146300712
Start: 3514402
End: 3515031
Strand: Direct
Name: 146300712
Synonym: Fjoh_2963
Alternate gene names: NA
Gene position: 3514402-3515031 (Clockwise)
Preceding gene: 146300711
Following gene: 146300717
Centisome position: 57.64
GC content: 29.68
Gene sequence:
>630_bases ATGAGAGACCAAAAAAAATACAGCAATAAAACCAAAGCGGCTTTTGTATTGCTGATTGTAATGCTCATTATTTTATTAGG AAACTTTAATACACTCCGGAATTCTAAAAATGTAAATGAAAATATCAACGCGATTTACAAAGACAGATTGGTTGTTGCTC ACTATATTTTTCAATATTCCAAACAATTGCATTTCATAAAAGCCGAAGCCGAAAAACTGGATTTAAGCGATAACATCAAA AAAAGCGAAATCATTCATACACTTGATATTATTCATAACATTGATGATTTGTATGCCAAAACGGTTTTAACCAATAAAGA AAAACAATACTTTGATACTTTTTTAAGCTCCTGTAAGGAAATCAACAAACAGGTTGAAAATAAAAATTGGAGTAAAATTG CCAGTTCAAGTGCCGAAGCACTGAAAACTTTAGAATCTTTATCGCAGATTCAAATAAAAGAAGGAAAAGCAAAACTGGCA AATGCAAATGCTATGTACAGCAAAAACAATAGTTTAGGACAATTGCAAATTGCTTTATTAATTGTTTTAGGCGGTATAAC TTTTTATCTTTTAATTGTAAAAAAAATCAAGAGAAAAATAAAAATCCCTGAACCGCCTAGTATGAATTAA
Upstream 100 bases:
>100_bases CGAAATGACATTTTGTTGTTGTTTTCAAGTTTCGAAAAATACTGTTTAGTCAGAAACAAATTTCTATCTTTGAGAAAAGC AATTTCCTAAACTAAGCATT
Downstream 100 bases:
>100_bases TTTATTCCATAGAATTTATCTTAACTTCCTGTCTTCTTCTTTTATTTGCAGGTCGTTTATACTGGCAAATCTTTTCTGCA TTAAACCATTGGCATCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MRDQKKYSNKTKAAFVLLIVMLIILLGNFNTLRNSKNVNENINAIYKDRLVVAHYIFQYSKQLHFIKAEAEKLDLSDNIK KSEIIHTLDIIHNIDDLYAKTVLTNKEKQYFDTFLSSCKEINKQVENKNWSKIASSSAEALKTLESLSQIQIKEGKAKLA NANAMYSKNNSLGQLQIALLIVLGGITFYLLIVKKIKRKIKIPEPPSMN
Sequences:
>Translated_209_residues MRDQKKYSNKTKAAFVLLIVMLIILLGNFNTLRNSKNVNENINAIYKDRLVVAHYIFQYSKQLHFIKAEAEKLDLSDNIK KSEIIHTLDIIHNIDDLYAKTVLTNKEKQYFDTFLSSCKEINKQVENKNWSKIASSSAEALKTLESLSQIQIKEGKAKLA NANAMYSKNNSLGQLQIALLIVLGGITFYLLIVKKIKRKIKIPEPPSMN >Mature_209_residues MRDQKKYSNKTKAAFVLLIVMLIILLGNFNTLRNSKNVNENINAIYKDRLVVAHYIFQYSKQLHFIKAEAEKLDLSDNIK KSEIIHTLDIIHNIDDLYAKTVLTNKEKQYFDTFLSSCKEINKQVENKNWSKIASSSAEALKTLESLSQIQIKEGKAKLA NANAMYSKNNSLGQLQIALLIVLGGITFYLLIVKKIKRKIKIPEPPSMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23874; Mature: 23874
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDQKKYSNKTKAAFVLLIVMLIILLGNFNTLRNSKNVNENINAIYKDRLVVAHYIFQYS CCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KQLHFIKAEAEKLDLSDNIKKSEIIHTLDIIHNIDDLYAKTVLTNKEKQYFDTFLSSCKE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH INKQVENKNWSKIASSSAEALKTLESLSQIQIKEGKAKLANANAMYSKNNSLGQLQIALL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCHHHHHHHH IVLGGITFYLLIVKKIKRKIKIPEPPSMN HHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRDQKKYSNKTKAAFVLLIVMLIILLGNFNTLRNSKNVNENINAIYKDRLVVAHYIFQYS CCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KQLHFIKAEAEKLDLSDNIKKSEIIHTLDIIHNIDDLYAKTVLTNKEKQYFDTFLSSCKE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH INKQVENKNWSKIASSSAEALKTLESLSQIQIKEGKAKLANANAMYSKNNSLGQLQIALL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCHHHHHHHH IVLGGITFYLLIVKKIKRKIKIPEPPSMN HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA