| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is sglT [H]
Identifier: 146300711
GI number: 146300711
Start: 3512460
End: 3514184
Strand: Direct
Name: sglT [H]
Synonym: Fjoh_2962
Alternate gene names: 146300711
Gene position: 3512460-3514184 (Clockwise)
Preceding gene: 146300710
Following gene: 146300712
Centisome position: 57.61
GC content: 35.36
Gene sequence:
>1725_bases ATGCAGCTATTTGACTGGATCGTACTTATTGTAACCCTTTTATTCATTGTTGGATATGGTTCATGGAAAACCAAAGGAAG CAAAAACGTTGAAGACTTTATTTTAGGAAACAACGAAACTCCGTGGTACACCGTTGGACTTTCTGTAATGGCAACACAGG CCAGCGCCATTACTTTTTTGTCTACACCGGGACAGGCTTATCACGACGGAATGGGATTTGTTCAATTCTATTTCGGACTT CCAATTGCCATGATTGTGATTTGTTTGACATTTATTCCGCTTTATCACAAATACAAAGTATTTACTGCCTATGAATTTCT CGAAAAACGATTTGATGTAAAAACACGTTCGCTTGCCGCTATCCTGTTTTTAGTACAACGAGGATTAGGAACCGGACTTA CCATTTATGCCCCTGCCATTATTTTGTCGGCACTTTTGGGCTGGAACCTTACCGTTATGAATATCATAATTGGGGTAATG GTAATTATTTATACGTTTTCTGGAGGAACCAAAGCCGTAAACGTTACGCAGAAACAGCAGATGTTTGTAATCATGTCGGG AATGTTTATCACCTTTTTCCTGATTCTGCATTATCTGCCAAACGATATGACTTTTACAAGTGCTTTGCATATTGCTGGTG CAAACGATAAAATGAATATTGTGGATTTCTCTTTTGATCCAGAAGAAAAATATACTTTTTGGAGCGGTATTACCGGAGGA TTTTTCTTAGCCCTCGCCTATTTTGGTACAGATCAGTCGCAGGTTGGAAGATATTTATCAGGAAAATCAGTTGCTGAAAG CCAGATGGGATTAATCATGAACGGACTTTTAAAAGTTCCAATGCAGTTTTTCATACTTCTTACCGGAGTAATGGTATTTG TGTTTTTTCAGTTCAATCCAGTTCCGTTAAATTTTAATCCGAACAATAAAGTTGTAATCGAAAAATCAGCTTATAAAGAA GAATACCATGCTTTAGAAAAAAAACTAAGCAAACTTTCTGAAGATAAAAAAGTAATTAATCTGCTGTATATCGATCAGTT AAATCAGGATTACGATAATCCGATTCTGAGAAAAGAATTAGTGAATTTGTCGAATAAAGAAAAAGATTTACGCGACCGCG CCAAAGAAATCATTTCAAGAGCCGACAGCAACAGCGAAACGAATGATAAAGATTATGTCTTTTTCCATTTCATTCTGCAT TATTTACCAAAAGGATTAATTGGTTTACTGCTTGCCGTGATTCTTTCAGCTGCCATGTCATCAACAGCTTCCGGATTAAA CGCTTTGGCTTCTACAACCGCAATCGACATTTACAAAAGAAACCTCAAAACCGAAAAATCAGAGAAACATTATCTTCATG CAACTAAATTTTTTACTTTATTTTGGGGAGTTGTAGCAATACTTTTTGCTTGTGTGGGAACTTTGTTTGAGAATTTAATT CAGCTTGTAAACATCATTGGATCTATCTTTTACGGAACAGTTCTGGGAATCTTCCTTGTTGGTTTTTATTTAAAAAGAGT TCAGGCAAAACCAATGTTTATCAGCGCTATTATTAGTCAGTTAACCATTTTTGTAATTTATTATTACATGATTTACAGTC AGGAAAAATTAGGCTATTTATGGCTGAATTTCATTGGTGCGATTTTAACTATTGTATTGTCGCTTTTATTGCAATTCTTA TTTTTTAAAGGAAAACCAAATGATGAAGAGCTGGTATTAGAATAA
Upstream 100 bases:
>100_bases AAAACAAAAAAATGGAAAAAAAGCTACACCTATGTTTTGGTAGCTAACGCAATTTACATTGTGATTTTTTTCTTAATCAT GCAATTTTATTCATAACCTT
Downstream 100 bases:
>100_bases TACATCTCTTGTTATTACACATAATTTTGTCATTTCGACAAAGAAGAAATCACATTAGAAAATCTACAAAGATTGTCGGC TTTCTACGCAGAAACACTGG
Product: SSS family solute/sodium (Na+) symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MQLFDWIVLIVTLLFIVGYGSWKTKGSKNVEDFILGNNETPWYTVGLSVMATQASAITFLSTPGQAYHDGMGFVQFYFGL PIAMIVICLTFIPLYHKYKVFTAYEFLEKRFDVKTRSLAAILFLVQRGLGTGLTIYAPAIILSALLGWNLTVMNIIIGVM VIIYTFSGGTKAVNVTQKQQMFVIMSGMFITFFLILHYLPNDMTFTSALHIAGANDKMNIVDFSFDPEEKYTFWSGITGG FFLALAYFGTDQSQVGRYLSGKSVAESQMGLIMNGLLKVPMQFFILLTGVMVFVFFQFNPVPLNFNPNNKVVIEKSAYKE EYHALEKKLSKLSEDKKVINLLYIDQLNQDYDNPILRKELVNLSNKEKDLRDRAKEIISRADSNSETNDKDYVFFHFILH YLPKGLIGLLLAVILSAAMSSTASGLNALASTTAIDIYKRNLKTEKSEKHYLHATKFFTLFWGVVAILFACVGTLFENLI QLVNIIGSIFYGTVLGIFLVGFYLKRVQAKPMFISAIISQLTIFVIYYYMIYSQEKLGYLWLNFIGAILTIVLSLLLQFL FFKGKPNDEELVLE
Sequences:
>Translated_574_residues MQLFDWIVLIVTLLFIVGYGSWKTKGSKNVEDFILGNNETPWYTVGLSVMATQASAITFLSTPGQAYHDGMGFVQFYFGL PIAMIVICLTFIPLYHKYKVFTAYEFLEKRFDVKTRSLAAILFLVQRGLGTGLTIYAPAIILSALLGWNLTVMNIIIGVM VIIYTFSGGTKAVNVTQKQQMFVIMSGMFITFFLILHYLPNDMTFTSALHIAGANDKMNIVDFSFDPEEKYTFWSGITGG FFLALAYFGTDQSQVGRYLSGKSVAESQMGLIMNGLLKVPMQFFILLTGVMVFVFFQFNPVPLNFNPNNKVVIEKSAYKE EYHALEKKLSKLSEDKKVINLLYIDQLNQDYDNPILRKELVNLSNKEKDLRDRAKEIISRADSNSETNDKDYVFFHFILH YLPKGLIGLLLAVILSAAMSSTASGLNALASTTAIDIYKRNLKTEKSEKHYLHATKFFTLFWGVVAILFACVGTLFENLI QLVNIIGSIFYGTVLGIFLVGFYLKRVQAKPMFISAIISQLTIFVIYYYMIYSQEKLGYLWLNFIGAILTIVLSLLLQFL FFKGKPNDEELVLE >Mature_574_residues MQLFDWIVLIVTLLFIVGYGSWKTKGSKNVEDFILGNNETPWYTVGLSVMATQASAITFLSTPGQAYHDGMGFVQFYFGL PIAMIVICLTFIPLYHKYKVFTAYEFLEKRFDVKTRSLAAILFLVQRGLGTGLTIYAPAIILSALLGWNLTVMNIIIGVM VIIYTFSGGTKAVNVTQKQQMFVIMSGMFITFFLILHYLPNDMTFTSALHIAGANDKMNIVDFSFDPEEKYTFWSGITGG FFLALAYFGTDQSQVGRYLSGKSVAESQMGLIMNGLLKVPMQFFILLTGVMVFVFFQFNPVPLNFNPNNKVVIEKSAYKE EYHALEKKLSKLSEDKKVINLLYIDQLNQDYDNPILRKELVNLSNKEKDLRDRAKEIISRADSNSETNDKDYVFFHFILH YLPKGLIGLLLAVILSAAMSSTASGLNALASTTAIDIYKRNLKTEKSEKHYLHATKFFTLFWGVVAILFACVGTLFENLI QLVNIIGSIFYGTVLGIFLVGFYLKRVQAKPMFISAIISQLTIFVIYYYMIYSQEKLGYLWLNFIGAILTIVLSLLLQFL FFKGKPNDEELVLE
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI4507035, Length=298, Percent_Identity=29.8657718120805, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI167466278, Length=256, Percent_Identity=32.03125, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI157671931, Length=274, Percent_Identity=28.8321167883212, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI256985183, Length=293, Percent_Identity=25.938566552901, Blast_Score=106, Evalue=8e-23, Organism=Homo sapiens, GI109659839, Length=536, Percent_Identity=21.6417910447761, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI4507033, Length=318, Percent_Identity=23.5849056603774, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI206597483, Length=299, Percent_Identity=25.0836120401338, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI14140236, Length=312, Percent_Identity=23.7179487179487, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI110835708, Length=327, Percent_Identity=25.0764525993884, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI17941285, Length=316, Percent_Identity=25, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI109659836, Length=363, Percent_Identity=23.1404958677686, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI206597487, Length=226, Percent_Identity=27.8761061946903, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4507031, Length=316, Percent_Identity=24.0506329113924, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1790113, Length=294, Percent_Identity=25.1700680272109, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115533094, Length=305, Percent_Identity=27.2131147540984, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI32566512, Length=193, Percent_Identity=27.979274611399, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI28573698, Length=299, Percent_Identity=26.7558528428094, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI28574994, Length=298, Percent_Identity=29.1946308724832, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI24641117, Length=275, Percent_Identity=29.8181818181818, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI281362918, Length=301, Percent_Identity=27.2425249169435, Blast_Score=116, Evalue=5e-26, Organism=Drosophila melanogaster, GI24651739, Length=303, Percent_Identity=25.0825082508251, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI24651741, Length=273, Percent_Identity=24.9084249084249, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI161076631, Length=262, Percent_Identity=26.3358778625954, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24645928, Length=274, Percent_Identity=24.8175182481752, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI281364280, Length=235, Percent_Identity=25.1063829787234, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI24640370, Length=252, Percent_Identity=26.5873015873016, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI19920916, Length=250, Percent_Identity=26.8, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI221459584, Length=280, Percent_Identity=24.2857142857143, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI221459582, Length=238, Percent_Identity=25.2100840336134, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI281362054, Length=269, Percent_Identity=22.6765799256506, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI281362052, Length=269, Percent_Identity=22.6765799256506, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI281362050, Length=269, Percent_Identity=22.6765799256506, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24648056, Length=269, Percent_Identity=22.6765799256506, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356827, Length=269, Percent_Identity=22.6765799256506, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI221379702, Length=245, Percent_Identity=24.8979591836735, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI221459588, Length=244, Percent_Identity=25.4098360655738, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24650192, Length=252, Percent_Identity=24.2063492063492, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI221459586, Length=238, Percent_Identity=25.6302521008403, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 64981; Mature: 64981
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLFDWIVLIVTLLFIVGYGSWKTKGSKNVEDFILGNNETPWYTVGLSVMATQASAITFL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCCCEEEECHHHHHHHHHHEEEE STPGQAYHDGMGFVQFYFGLPIAMIVICLTFIPLYHKYKVFTAYEFLEKRFDVKTRSLAA CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ILFLVQRGLGTGLTIYAPAIILSALLGWNLTVMNIIIGVMVIIYTFSGGTKAVNVTQKQQ HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH MFVIMSGMFITFFLILHYLPNDMTFTSALHIAGANDKMNIVDFSFDPEEKYTFWSGITGG HHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCEEEEECCCCCCCEEECCCCHHH FFLALAYFGTDQSQVGRYLSGKSVAESQMGLIMNGLLKVPMQFFILLTGVMVFVFFQFNP HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPLNFNPNNKVVIEKSAYKEEYHALEKKLSKLSEDKKVINLLYIDQLNQDYDNPILRKEL EEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VNLSNKEKDLRDRAKEIISRADSNSETNDKDYVFFHFILHYLPKGLIGLLLAVILSAAMS HCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STASGLNALASTTAIDIYKRNLKTEKSEKHYLHATKFFTLFWGVVAILFACVGTLFENLI HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLVNIIGSIFYGTVLGIFLVGFYLKRVQAKPMFISAIISQLTIFVIYYYMIYSQEKLGYL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH WLNFIGAILTIVLSLLLQFLFFKGKPNDEELVLE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQLFDWIVLIVTLLFIVGYGSWKTKGSKNVEDFILGNNETPWYTVGLSVMATQASAITFL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCCCEEEECHHHHHHHHHHEEEE STPGQAYHDGMGFVQFYFGLPIAMIVICLTFIPLYHKYKVFTAYEFLEKRFDVKTRSLAA CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ILFLVQRGLGTGLTIYAPAIILSALLGWNLTVMNIIIGVMVIIYTFSGGTKAVNVTQKQQ HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH MFVIMSGMFITFFLILHYLPNDMTFTSALHIAGANDKMNIVDFSFDPEEKYTFWSGITGG HHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCEEEEECCCCCCCEEECCCCHHH FFLALAYFGTDQSQVGRYLSGKSVAESQMGLIMNGLLKVPMQFFILLTGVMVFVFFQFNP HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPLNFNPNNKVVIEKSAYKEEYHALEKKLSKLSEDKKVINLLYIDQLNQDYDNPILRKEL EEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VNLSNKEKDLRDRAKEIISRADSNSETNDKDYVFFHFILHYLPKGLIGLLLAVILSAAMS HCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STASGLNALASTTAIDIYKRNLKTEKSEKHYLHATKFFTLFWGVVAILFACVGTLFENLI HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLVNIIGSIFYGTVLGIFLVGFYLKRVQAKPMFISAIISQLTIFVIYYYMIYSQEKLGYL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH WLNFIGAILTIVLSLLLQFLFFKGKPNDEELVLE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]