Click here to switch to the map view.

The map label for this gene is 146300710

Identifier: 146300710

GI number: 146300710

Start: 3509806

End: 3512337

Strand: Direct

Name: 146300710

Synonym: Fjoh_2961

Alternate gene names: NA

Gene position: 3509806-3512337 (Clockwise)

Preceding gene: 146300709

Following gene: 146300711

Centisome position: 57.57

GC content: 35.9

Gene sequence:

>2532_bases
ATGCGAAAAATACAGGTTTCATTTCTTCTTCTATTTTTTATAGGTTTTCAAATCACATTTGCACAACAGCCTCAAAAACC
AAATTCTGTTGAAATTTACAATCAAATTAAAAAGCTAAACTTTTTAGGTTCTGTATTGTATCTTGCCGCACATCCTGATG
ACGAAAATACCCGTATGATTTCTTATCTGGCCAACGAAATGAATGCCAGAACAGGTTATTTATCGTTAACAAGAGGCGAC
GGCGGACAAAACTTAATTGGCCCGCAATTGCGTGAACTGCTTGGTGTAATTAGAACTCAGGAATTAATCGAAGCCCGAAA
AATTGACGGCGGAGAACAATTCTTTTCAAGAGCAAATGATTTTGGTTTTTCTAAAAATCCAGACGAAACACTCGAAATTT
GGGATAAAGACAAAGTTCTTGCCGATGTGGTTTGGACCATCAGAAATTTTCAGCCGGATATTATCATTAACCGATTCGAT
CATCGTTCGCCGGGAACTACTCACGGACATCATACATCATCTGCTATGCTGAGTGTTGAAAGTTTTAAATTAACAAACGA
TCCTAAAATATATCCAGAACAGCTTAAATATGTTGCTCCGTGGCAGGTAAAACGTCAGTTTTTTAATCCATCGTGGTGGT
TTTACGGAAGCCAGGAAAAATTTGATGCTGCTAACAAATCTAAATTTACTAAACTCGAAACAGGAGTTTATTATACAGGA
ACAGGAAAATCAAATCAGGAAATTGCAGCTTTAAGCCGAAGCCGTCATCAATCACAAGGTTTTGGAAGTACAGGAGTTCG
CGGTTTAGAAACTGAATACCTTGAACTTATTAATGGCGAAGCTCCAAAAGACCGTGATAATTTGTTTGATGGAATTGACA
CCAGCTGGAACCGCGTTAAAAACGGAAAACCAATTGGAGATTTGATTTCGGCAATTATTGAAAAGTACAATTTCAATAAT
CCATCTGCCAGTATTCCAGATTTGGTAAAAGCGTATTCTATGATTGAAGCTTTAGACGATACACATTGGAAAACTGTAAA
AGCAGCCGCTATTAAAAATATTATTGCTTCCTGCTCTGGTTTATACCTTGAAGCTGTTGCAAGCGAACAGGAAGCAACTC
CGGGAAGCACAATAAAATTAAGTCTTGAAGCCATAAACCGATGTGCTGTTGAAATGCAGTTAACAAGCATTACAACATTG
CCGGACAATAAAACTACAGTTCAAAACAGTGTTTTAAAAGACAATAACGATCAAAGAATCAATCTGCAGATACAGCTTCC
AAACAACATTGAATATACACAGCCTTACTGGTTAAAAGAAAAGGCATCAGTTGGAATGTACACCGTTTCTAACCAATTAA
ATATTGGAATTCCTGATATTATCAGAGAAGTAAAGGTTGTTTTTAATGTAAAAATAAGCGGTGTTGAAATTCCGTTTGAA
CGTACTGTAGTTTACAAATACAACGACGGTGTAAAAGGCGAAATGTATAATTTTCTGGATATAGTGCCAGAAGTTACAAC
CTCTATTTTAGAGAAAGTATTGGTTTTTAGAGATACTAAAACCAAAATGATTCCGGTAAAAGTACGTGCAGGAAAAGATG
ATATAAAAGGAAATTTACAATTAGAACTTCCAAAAAGCTGGAGTGTATCTCCAAAACAAATTCCGTTTACTTTAGACAAA
AAAGGAACAGAACAAATCTTTTATTTTGAAGTTACACCGCCCGTTAATCCAGAAGAAGTTGTCGCAAAAAGCATTGCCGT
TGTAGACAATAAGCGTTTTGACAGAGACCAAACCATTATTGATTTTAATCATATTACGAAACAAATGGTTTTAAAACCGG
CAGAATCAAAATGTATCAGAATAGATTTAAAAACTTCTGGCGATGCTATCGCTTATATTATGGGCGCTGGTGACGAAGTT
CCGGAAAGTCTGACTCAAATGGGATACAAAGTTTCTATTTTAAAACCAGAAGAAATTACTCCTGAAAAATTAGATTCATT
TAGTACTGTGATTACGGGAATCCGTGCTTATAATACCGTAAATGCTTTGGCTAACAAACAGAACATTTTATTCAATTTCG
TAAAAAGCGGTAAAAACATGATCGTGCAGTACAATACCAACGGAAAATTGGTTACCGATAAAATTGCACCATATCCGTTA
AAATTATCAAATGACCGTGTAACCGAAGAAAACGCAAAGGTTACATTCTTAGCTCCTAATCATCCGGTTTTAAATACGCC
AAACAAAATCACGTCTAAAGATTTTGAAGGCTGGACACAAGAACAGGGTTTATATTATCCAGACGAATTTGACCCGGCCT
TTACTCCTATTATTTCATCACATGATAAAGGAGAATCAGCTAAAAAAGGCGCTTTATTAGTAGCTCCTTACGGAAAAGGA
TATTACATCTATACCGGTTTAAGTTTCTTTAGAGAATTACCAGAAGGTGTTTCCGGCGCTTATAAACTGCTGTCGAATAT
TATTTCGCTAAAACAGCCAATTGAAGCTCCAAAACAAGATATAAAGCAATAA

Upstream 100 bases:

>100_bases
ATTAAGGTATAATTATTGTGCGTTAACATTTCATTTAAATAATCTTCCATAAAATAATTAGTATTTTTGGGACAATTTCA
AAAAAACATCTAACTCTGCC

Downstream 100 bases:

>100_bases
AAACCGCAATATGGAAGCTAAAAAAACAAAAAAATGGAAAAAAAGCTACACCTATGTTTTGGTAGCTAACGCAATTTACA
TTGTGATTTTTTTCTTAATC

Product: LmbE family protein

Products: NA

Alternate protein names: GlcNAc-PI De-N-Acetylase Family Protein; GlcNAc-PI De-N-Acetylase Family; Lmbe Family Protein; Secreted Protein; N-Acetylglucosaminylphosphatidylinositoldeacetylase; LmbE-Like Protein

Number of amino acids: Translated: 843; Mature: 843

Protein sequence:

>843_residues
MRKIQVSFLLLFFIGFQITFAQQPQKPNSVEIYNQIKKLNFLGSVLYLAAHPDDENTRMISYLANEMNARTGYLSLTRGD
GGQNLIGPQLRELLGVIRTQELIEARKIDGGEQFFSRANDFGFSKNPDETLEIWDKDKVLADVVWTIRNFQPDIIINRFD
HRSPGTTHGHHTSSAMLSVESFKLTNDPKIYPEQLKYVAPWQVKRQFFNPSWWFYGSQEKFDAANKSKFTKLETGVYYTG
TGKSNQEIAALSRSRHQSQGFGSTGVRGLETEYLELINGEAPKDRDNLFDGIDTSWNRVKNGKPIGDLISAIIEKYNFNN
PSASIPDLVKAYSMIEALDDTHWKTVKAAAIKNIIASCSGLYLEAVASEQEATPGSTIKLSLEAINRCAVEMQLTSITTL
PDNKTTVQNSVLKDNNDQRINLQIQLPNNIEYTQPYWLKEKASVGMYTVSNQLNIGIPDIIREVKVVFNVKISGVEIPFE
RTVVYKYNDGVKGEMYNFLDIVPEVTTSILEKVLVFRDTKTKMIPVKVRAGKDDIKGNLQLELPKSWSVSPKQIPFTLDK
KGTEQIFYFEVTPPVNPEEVVAKSIAVVDNKRFDRDQTIIDFNHITKQMVLKPAESKCIRIDLKTSGDAIAYIMGAGDEV
PESLTQMGYKVSILKPEEITPEKLDSFSTVITGIRAYNTVNALANKQNILFNFVKSGKNMIVQYNTNGKLVTDKIAPYPL
KLSNDRVTEENAKVTFLAPNHPVLNTPNKITSKDFEGWTQEQGLYYPDEFDPAFTPIISSHDKGESAKKGALLVAPYGKG
YYIYTGLSFFRELPEGVSGAYKLLSNIISLKQPIEAPKQDIKQ

Sequences:

>Translated_843_residues
MRKIQVSFLLLFFIGFQITFAQQPQKPNSVEIYNQIKKLNFLGSVLYLAAHPDDENTRMISYLANEMNARTGYLSLTRGD
GGQNLIGPQLRELLGVIRTQELIEARKIDGGEQFFSRANDFGFSKNPDETLEIWDKDKVLADVVWTIRNFQPDIIINRFD
HRSPGTTHGHHTSSAMLSVESFKLTNDPKIYPEQLKYVAPWQVKRQFFNPSWWFYGSQEKFDAANKSKFTKLETGVYYTG
TGKSNQEIAALSRSRHQSQGFGSTGVRGLETEYLELINGEAPKDRDNLFDGIDTSWNRVKNGKPIGDLISAIIEKYNFNN
PSASIPDLVKAYSMIEALDDTHWKTVKAAAIKNIIASCSGLYLEAVASEQEATPGSTIKLSLEAINRCAVEMQLTSITTL
PDNKTTVQNSVLKDNNDQRINLQIQLPNNIEYTQPYWLKEKASVGMYTVSNQLNIGIPDIIREVKVVFNVKISGVEIPFE
RTVVYKYNDGVKGEMYNFLDIVPEVTTSILEKVLVFRDTKTKMIPVKVRAGKDDIKGNLQLELPKSWSVSPKQIPFTLDK
KGTEQIFYFEVTPPVNPEEVVAKSIAVVDNKRFDRDQTIIDFNHITKQMVLKPAESKCIRIDLKTSGDAIAYIMGAGDEV
PESLTQMGYKVSILKPEEITPEKLDSFSTVITGIRAYNTVNALANKQNILFNFVKSGKNMIVQYNTNGKLVTDKIAPYPL
KLSNDRVTEENAKVTFLAPNHPVLNTPNKITSKDFEGWTQEQGLYYPDEFDPAFTPIISSHDKGESAKKGALLVAPYGKG
YYIYTGLSFFRELPEGVSGAYKLLSNIISLKQPIEAPKQDIKQ
>Mature_843_residues
MRKIQVSFLLLFFIGFQITFAQQPQKPNSVEIYNQIKKLNFLGSVLYLAAHPDDENTRMISYLANEMNARTGYLSLTRGD
GGQNLIGPQLRELLGVIRTQELIEARKIDGGEQFFSRANDFGFSKNPDETLEIWDKDKVLADVVWTIRNFQPDIIINRFD
HRSPGTTHGHHTSSAMLSVESFKLTNDPKIYPEQLKYVAPWQVKRQFFNPSWWFYGSQEKFDAANKSKFTKLETGVYYTG
TGKSNQEIAALSRSRHQSQGFGSTGVRGLETEYLELINGEAPKDRDNLFDGIDTSWNRVKNGKPIGDLISAIIEKYNFNN
PSASIPDLVKAYSMIEALDDTHWKTVKAAAIKNIIASCSGLYLEAVASEQEATPGSTIKLSLEAINRCAVEMQLTSITTL
PDNKTTVQNSVLKDNNDQRINLQIQLPNNIEYTQPYWLKEKASVGMYTVSNQLNIGIPDIIREVKVVFNVKISGVEIPFE
RTVVYKYNDGVKGEMYNFLDIVPEVTTSILEKVLVFRDTKTKMIPVKVRAGKDDIKGNLQLELPKSWSVSPKQIPFTLDK
KGTEQIFYFEVTPPVNPEEVVAKSIAVVDNKRFDRDQTIIDFNHITKQMVLKPAESKCIRIDLKTSGDAIAYIMGAGDEV
PESLTQMGYKVSILKPEEITPEKLDSFSTVITGIRAYNTVNALANKQNILFNFVKSGKNMIVQYNTNGKLVTDKIAPYPL
KLSNDRVTEENAKVTFLAPNHPVLNTPNKITSKDFEGWTQEQGLYYPDEFDPAFTPIISSHDKGESAKKGALLVAPYGKG
YYIYTGLSFFRELPEGVSGAYKLLSNIISLKQPIEAPKQDIKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94896; Mature: 94896

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIQVSFLLLFFIGFQITFAQQPQKPNSVEIYNQIKKLNFLGSVLYLAAHPDDENTRMI
CCEEHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCCHHHH
SYLANEMNARTGYLSLTRGDGGQNLIGPQLRELLGVIRTQELIEARKIDGGEQFFSRAND
HHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
FGFSKNPDETLEIWDKDKVLADVVWTIRNFQPDIIINRFDHRSPGTTHGHHTSSAMLSVE
CCCCCCCCHHHEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHEEEEE
SFKLTNDPKIYPEQLKYVAPWQVKRQFFNPSWWFYGSQEKFDAANKSKFTKLETGVYYTG
EEEECCCCCCCHHHCCCCCCHHHHHHHCCCCEEEECCCHHHCCCCCCCCEEEECCEEEEC
TGKSNQEIAALSRSRHQSQGFGSTGVRGLETEYLELINGEAPKDRDNLFDGIDTSWNRVK
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCHHHCC
NGKPIGDLISAIIEKYNFNNPSASIPDLVKAYSMIEALDDTHWKTVKAAAIKNIIASCSG
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
LYLEAVASEQEATPGSTIKLSLEAINRCAVEMQLTSITTLPDNKTTVQNSVLKDNNDQRI
HHHHHHHCCCCCCCCCEEEEEHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHCCCCCCEE
NLQIQLPNNIEYTQPYWLKEKASVGMYTVSNQLNIGIPDIIREVKVVFNVKISGVEIPFE
EEEEECCCCCCCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHEEEEEEEEEECEECCCC
RTVVYKYNDGVKGEMYNFLDIVPEVTTSILEKVLVFRDTKTKMIPVKVRAGKDDIKGNLQ
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCCCCCEE
LELPKSWSVSPKQIPFTLDKKGTEQIFYFEVTPPVNPEEVVAKSIAVVDNKRFDRDQTII
EEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEE
DFNHITKQMVLKPAESKCIRIDLKTSGDAIAYIMGAGDEVPESLTQMGYKVSILKPEEIT
EHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCC
PEKLDSFSTVITGIRAYNTVNALANKQNILFNFVKSGKNMIVQYNTNGKLVTDKIAPYPL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCE
KLSNDRVTEENAKVTFLAPNHPVLNTPNKITSKDFEGWTQEQGLYYPDEFDPAFTPIISS
EECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
HDKGESAKKGALLVAPYGKGYYIYTGLSFFRELPEGVSGAYKLLSNIISLKQPIEAPKQD
CCCCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IKQ
HCC
>Mature Secondary Structure
MRKIQVSFLLLFFIGFQITFAQQPQKPNSVEIYNQIKKLNFLGSVLYLAAHPDDENTRMI
CCEEHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCCHHHH
SYLANEMNARTGYLSLTRGDGGQNLIGPQLRELLGVIRTQELIEARKIDGGEQFFSRAND
HHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
FGFSKNPDETLEIWDKDKVLADVVWTIRNFQPDIIINRFDHRSPGTTHGHHTSSAMLSVE
CCCCCCCCHHHEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHEEEEE
SFKLTNDPKIYPEQLKYVAPWQVKRQFFNPSWWFYGSQEKFDAANKSKFTKLETGVYYTG
EEEECCCCCCCHHHCCCCCCHHHHHHHCCCCEEEECCCHHHCCCCCCCCEEEECCEEEEC
TGKSNQEIAALSRSRHQSQGFGSTGVRGLETEYLELINGEAPKDRDNLFDGIDTSWNRVK
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCHHHCC
NGKPIGDLISAIIEKYNFNNPSASIPDLVKAYSMIEALDDTHWKTVKAAAIKNIIASCSG
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
LYLEAVASEQEATPGSTIKLSLEAINRCAVEMQLTSITTLPDNKTTVQNSVLKDNNDQRI
HHHHHHHCCCCCCCCCEEEEEHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHCCCCCCEE
NLQIQLPNNIEYTQPYWLKEKASVGMYTVSNQLNIGIPDIIREVKVVFNVKISGVEIPFE
EEEEECCCCCCCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHEEEEEEEEEECEECCCC
RTVVYKYNDGVKGEMYNFLDIVPEVTTSILEKVLVFRDTKTKMIPVKVRAGKDDIKGNLQ
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCCCCCEE
LELPKSWSVSPKQIPFTLDKKGTEQIFYFEVTPPVNPEEVVAKSIAVVDNKRFDRDQTII
EEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEE
DFNHITKQMVLKPAESKCIRIDLKTSGDAIAYIMGAGDEVPESLTQMGYKVSILKPEEIT
EHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCC
PEKLDSFSTVITGIRAYNTVNALANKQNILFNFVKSGKNMIVQYNTNGKLVTDKIAPYPL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCE
KLSNDRVTEENAKVTFLAPNHPVLNTPNKITSKDFEGWTQEQGLYYPDEFDPAFTPIISS
EECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
HDKGESAKKGALLVAPYGKGYYIYTGLSFFRELPEGVSGAYKLLSNIISLKQPIEAPKQD
CCCCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IKQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA