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The map label for this gene is yhdE [C]

Identifier: 146300704

GI number: 146300704

Start: 3502811

End: 3503395

Strand: Direct

Name: yhdE [C]

Synonym: Fjoh_2955

Alternate gene names: 146300704

Gene position: 3502811-3503395 (Clockwise)

Preceding gene: 146300703

Following gene: 146300705

Centisome position: 57.45

GC content: 33.33

Gene sequence:

>585_bases
ATGCTTAAAGAAAAACTCAAAAAATATAAAATTATACTGGCTTCGGGATCGCCTCGCAGACAGCAGTTTTTTAAAGATCT
GGATCTTGATTTCGAAATTCGATTAAAAGATGTAGAAGAAATCTATCCGCCTGAATTAAAAGCAGTCGAAATAACCAATT
TTCTGGCAGAGTTAAAAGCAAATGCTTTTGAAGGAGAATTAAAAGAAAATGAAATATTGGTAACCAGCGACACAATTGTA
TGGCATCAGAACAAAGCTTTAGGCAAACCAAAAAATGCCGAAGATGCTTTTCAAATGATCAAATCAATGTCGAATACTAC
TCACGAAGTTATTACATCGGTTTGTTTTAAAACTAACACTGCTTTTACCCTTTTACATGATGTTACAAAAGTTACTTTCA
AAGATTTATCAGATGAAAGTATTTTATATTATATCGAAAACTACAAACCTTACGACAAAGCTGGAGCTTATGGCATTCAG
GAATGGTTTGGTTTTATGGCAGTTACAAAAGTCGAAGGTTCTTACACCAATGTTATGGGACTTCCAACAGCCAAAGTTTA
CGAATATTTGACTACATTAGTGTAA

Upstream 100 bases:

>100_bases
AAAACAAAAAAGGATTTTCATCATTTAAGTACTATTTTAAAATTGATTTTGTTCTTCGGAATTTTATCAATTTTAGTAAT
CAGCTTAAACCACCAATACA

Downstream 100 bases:

>100_bases
AAATTTATTTATGTTTTCTTTAAAAGAATATACTCAGGAAATACTTGCTACAATAATTCTTCTATTGGCTTTAGTCGCTT
TACGAATGATTACTGCCAAA

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLKEKLKKYKIILASGSPRRQQFFKDLDLDFEIRLKDVEEIYPPELKAVEITNFLAELKANAFEGELKENEILVTSDTIV
WHQNKALGKPKNAEDAFQMIKSMSNTTHEVITSVCFKTNTAFTLLHDVTKVTFKDLSDESILYYIENYKPYDKAGAYGIQ
EWFGFMAVTKVEGSYTNVMGLPTAKVYEYLTTLV

Sequences:

>Translated_194_residues
MLKEKLKKYKIILASGSPRRQQFFKDLDLDFEIRLKDVEEIYPPELKAVEITNFLAELKANAFEGELKENEILVTSDTIV
WHQNKALGKPKNAEDAFQMIKSMSNTTHEVITSVCFKTNTAFTLLHDVTKVTFKDLSDESILYYIENYKPYDKAGAYGIQ
EWFGFMAVTKVEGSYTNVMGLPTAKVYEYLTTLV
>Mature_194_residues
MLKEKLKKYKIILASGSPRRQQFFKDLDLDFEIRLKDVEEIYPPELKAVEITNFLAELKANAFEGELKENEILVTSDTIV
WHQNKALGKPKNAEDAFQMIKSMSNTTHEVITSVCFKTNTAFTLLHDVTKVTFKDLSDESILYYIENYKPYDKAGAYGIQ
EWFGFMAVTKVEGSYTNVMGLPTAKVYEYLTTLV

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=200, Percent_Identity=31, Blast_Score=97, Evalue=8e-21,
Organism=Homo sapiens, GI291045183, Length=186, Percent_Identity=31.1827956989247, Blast_Score=84, Evalue=5e-17,
Organism=Homo sapiens, GI291045181, Length=144, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI310133124, Length=125, Percent_Identity=34.4, Blast_Score=79, Evalue=2e-15,
Organism=Escherichia coli, GI1789646, Length=179, Percent_Identity=40.2234636871508, Blast_Score=128, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=29.6875, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI78706856, Length=204, Percent_Identity=33.8235294117647, Blast_Score=106, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2955_FLAJ1 (A5FFP4)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001195295.1
- ProteinModelPortal:   A5FFP4
- SMR:   A5FFP4
- STRING:   A5FFP4
- GeneID:   5091571
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_2955
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   RNHRVYT
- ProtClustDB:   PRK00648
- BioCyc:   FJOH376686:FJOH_2955-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 22276; Mature: 22276

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: ACT_SITE 40-40

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEKLKKYKIILASGSPRRQQFFKDLDLDFEIRLKDVEEIYPPELKAVEITNFLAELKA
CCHHHHHHEEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHC
NAFEGELKENEILVTSDTIVWHQNKALGKPKNAEDAFQMIKSMSNTTHEVITSVCFKTNT
CCCCCCCCCCEEEEEECEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCC
AFTLLHDVTKVTFKDLSDESILYYIENYKPYDKAGAYGIQEWFGFMAVTKVEGSYTNVMG
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHEEEECCCCCCEEC
LPTAKVYEYLTTLV
CCHHHHHHHHHHCC
>Mature Secondary Structure
MLKEKLKKYKIILASGSPRRQQFFKDLDLDFEIRLKDVEEIYPPELKAVEITNFLAELKA
CCHHHHHHEEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHC
NAFEGELKENEILVTSDTIVWHQNKALGKPKNAEDAFQMIKSMSNTTHEVITSVCFKTNT
CCCCCCCCCCEEEEEECEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCC
AFTLLHDVTKVTFKDLSDESILYYIENYKPYDKAGAYGIQEWFGFMAVTKVEGSYTNVMG
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHEEEECCCCCCEEC
LPTAKVYEYLTTLV
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA