Click here to switch to the map view.

The map label for this gene is ubiA

Identifier: 146300703

GI number: 146300703

Start: 3501892

End: 3502818

Strand: Direct

Name: ubiA

Synonym: Fjoh_2954

Alternate gene names: NA

Gene position: 3501892-3502818 (Clockwise)

Preceding gene: 146300702

Following gene: 146300704

Centisome position: 57.44

GC content: 31.18

Gene sequence:

>927_bases
ATGAAATATCTAAAACTAATTCGATATAAAAATCTACTCATGCTTGCTTTTATGCAGGTTTTATTTCGTTATGCTTTTTT
AAAACAACAGGATATTCCTTTGGCATTAGCTGACTGGCAATACGGACTTTTGGTTTTAAGTACAGTTTTGCTTGCGGCAG
CAGGTTATGTAATCAACAATATTTTTGATGTACCAACAGATACTATCAATAAACCAGAGAATGTTGTTGTTGGTAAAGGA
ATTTCTGAAACCAGAGCGTACAATATTTATATAGGATTAAACATTACAGGTGTAGCATTAGGGTTTTATCTTTCAAATGT
GATCATGAGGCCAATGTTTGCTTCATTGTTTATTTTTATTGCATCGCTTCTTTATTTTTATGCAACTAATCTAAAACAGA
TCATGATTCTGGGGAATTTTGTAGTTGCTTTACTCCTTTCTATTAGTGTTTTAATTATTGGTGTATTTGATTTATTTCCT
GCTACAACTACCGAAAATCAGGCTCAAATGGCCAGCTTATTTTCAATATTGGTTGATTATGCTTTGTTTGCCTTTATGAT
CAATTTTGTGCGCGAAATAGTAAAAGATATTGAAGACATGGACGGCGATTACAATCAGGGAATGAACACGCTGCCAATTG
CTATTGGGAAAAACAGAGCTGCTAAAATTGCGTTGGGATTTACTATAATTCCGTTTATTTTATCGCTGCTTTACATCAAT
AAATATTTCTTCCAAAATAATCTGTTAATCGTTACGTTTTATACGTTTGTTTTTGTTCTTGCACCATTATTATATTTTAT
AGTAAAGATATTCGGCGCTAAAACAAAAAAGGATTTTCATCATTTAAGTACTATTTTAAAATTGATTTTGTTCTTCGGAA
TTTTATCAATTTTAGTAATCAGCTTAAACCACCAATACAATGCTTAA

Upstream 100 bases:

>100_bases
AACGGAAAACACGATTAAATCTAATTGTGAATTGTTAATGATTAATTGTTAATTAAAAAACTTAGAACCTTAGCATCTTA
GCCACTCAGAACCTCAAAAA

Downstream 100 bases:

>100_bases
AGAAAAACTCAAAAAATATAAAATTATACTGGCTTCGGGATCGCCTCGCAGACAGCAGTTTTTTAAAGATCTGGATCTTG
ATTTCGAAATTCGATTAAAA

Product: prenyltransferase

Products: NA

Alternate protein names: DGGGP synthase; DGGGPS; (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase; Geranylgeranylglycerol-phosphate geranylgeranyltransferase [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKYLKLIRYKNLLMLAFMQVLFRYAFLKQQDIPLALADWQYGLLVLSTVLLAAAGYVINNIFDVPTDTINKPENVVVGKG
ISETRAYNIYIGLNITGVALGFYLSNVIMRPMFASLFIFIASLLYFYATNLKQIMILGNFVVALLLSISVLIIGVFDLFP
ATTTENQAQMASLFSILVDYALFAFMINFVREIVKDIEDMDGDYNQGMNTLPIAIGKNRAAKIALGFTIIPFILSLLYIN
KYFFQNNLLIVTFYTFVFVLAPLLYFIVKIFGAKTKKDFHHLSTILKLILFFGILSILVISLNHQYNA

Sequences:

>Translated_308_residues
MKYLKLIRYKNLLMLAFMQVLFRYAFLKQQDIPLALADWQYGLLVLSTVLLAAAGYVINNIFDVPTDTINKPENVVVGKG
ISETRAYNIYIGLNITGVALGFYLSNVIMRPMFASLFIFIASLLYFYATNLKQIMILGNFVVALLLSISVLIIGVFDLFP
ATTTENQAQMASLFSILVDYALFAFMINFVREIVKDIEDMDGDYNQGMNTLPIAIGKNRAAKIALGFTIIPFILSLLYIN
KYFFQNNLLIVTFYTFVFVLAPLLYFIVKIFGAKTKKDFHHLSTILKLILFFGILSILVISLNHQYNA
>Mature_308_residues
MKYLKLIRYKNLLMLAFMQVLFRYAFLKQQDIPLALADWQYGLLVLSTVLLAAAGYVINNIFDVPTDTINKPENVVVGKG
ISETRAYNIYIGLNITGVALGFYLSNVIMRPMFASLFIFIASLLYFYATNLKQIMILGNFVVALLLSISVLIIGVFDLFP
ATTTENQAQMASLFSILVDYALFAFMINFVREIVKDIEDMDGDYNQGMNTLPIAIGKNRAAKIALGFTIIPFILSLLYIN
KYFFQNNLLIVTFYTFVFVLAPLLYFIVKIFGAKTKKDFHHLSTILKLILFFGILSILVISLNHQYNA

Specific function: Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesi

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family. DGGGP synthase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: =2.5.1.42 [H]

Molecular weight: Translated: 34917; Mature: 34917

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLKLIRYKNLLMLAFMQVLFRYAFLKQQDIPLALADWQYGLLVLSTVLLAAAGYVINN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
IFDVPTDTINKPENVVVGKGISETRAYNIYIGLNITGVALGFYLSNVIMRPMFASLFIFI
HHCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLYFYATNLKQIMILGNFVVALLLSISVLIIGVFDLFPATTTENQAQMASLFSILVDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ALFAFMINFVREIVKDIEDMDGDYNQGMNTLPIAIGKNRAAKIALGFTIIPFILSLLYIN
HHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
KYFFQNNLLIVTFYTFVFVLAPLLYFIVKIFGAKTKKDFHHLSTILKLILFFGILSILVI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLNHQYNA
HHCCCCCC
>Mature Secondary Structure
MKYLKLIRYKNLLMLAFMQVLFRYAFLKQQDIPLALADWQYGLLVLSTVLLAAAGYVINN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
IFDVPTDTINKPENVVVGKGISETRAYNIYIGLNITGVALGFYLSNVIMRPMFASLFIFI
HHCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLYFYATNLKQIMILGNFVVALLLSISVLIIGVFDLFPATTTENQAQMASLFSILVDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ALFAFMINFVREIVKDIEDMDGDYNQGMNTLPIAIGKNRAAKIALGFTIIPFILSLLYIN
HHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
KYFFQNNLLIVTFYTFVFVLAPLLYFIVKIFGAKTKKDFHHLSTILKLILFFGILSILVI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLNHQYNA
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA