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The map label for this gene is yqeN [H]

Identifier: 146300667

GI number: 146300667

Start: 3460414

End: 3461418

Strand: Reverse

Name: yqeN [H]

Synonym: Fjoh_2918

Alternate gene names: 146300667

Gene position: 3461418-3460414 (Counterclockwise)

Preceding gene: 146300671

Following gene: 146300666

Centisome position: 56.77

GC content: 31.24

Gene sequence:

>1005_bases
ATGGACGAAGTAATTAAAATTGTTAACGATATTAAGGCAGGTAATATAAAACCTATCTATTTTTTAATGGGTGAAGAACC
TTATTATATAGATAAGTTGTCTGAATATATCGAACAAAATGTTTTGGCTGAAGAAGAAAAAGGTTTCAATCAAACTGTTT
TATATGGAAGGGATGTTAGTGTTGAAGATATAGTTTCAACGGCCAAGCGCTATCCTATGATGGCTGATCGTCAGGTTGTT
ATTGTAAAAGAAGCACAAGAATTGTCCAGAACAATTGATAAAATTGAAGCCTATGTAAATAACCCGATGGAATCTACTGT
TTTGGTTTTTTGTTATAAATACAAAACTTTAGACAAGAGAAAAAAAGTCACTAAACTTTTGGCTCAAAACGGGATAGTTT
ACGAAAGTAAAAAATTATATGAAAATCAGGTAGGAGATTGGATCAAACGAGTTTTAGCTGGAAAAAAATATACAATAGAC
CCAAAAGCCAATGCAATGCTTGTGGAGTTTTTAGGAACTGATTTGAGTAAAATAAACAACGAACTTGAAAAACTGCAAAT
TATTCTCCCTCAAGGAACTATGATTACGCCCCAGCATATTGAAGAAAATATAGGTTTTAGTAAAGACTATAATGTATTTG
AACTTCGAAAAGCAATTGGTGAACGCAATCAGCTGAAAGCATATAAAATTGCTGAAAACTTTGCTCATAATCCAAAAGAG
TATCCGCTTGTAATGACAACCGGACTTGTTTTTGGTTTTTTTGTACAGCTTTTAAAATACCACGGATTAAAAGATAAAAA
TCCAAAAAATGTAGCTTCAGTTCTTGGTGTAAATCCGTTTTTTCTAAAAGAATATGATTTAGCTGTAAAGAATTATCCAA
TGCGTAAAGTGAGTCAGATTGTTGGAGCTTTAAGAGATATTGATGTTAAAAGTAAAGGTGTAGGTGCTAATGCTTTACCT
CAATCAGATTTACTAAAAGAAATGCTTTATAAAATATTTAATTAA

Upstream 100 bases:

>100_bases
TAACATAAAGCAAAAATAAAAAATAGTTTGAGGTTTCAAGTTTAAAGTTTCAAGTTTTGAAGCAGAACCTGAAACTTTAA
ACTTGAAACAAAAAGATTGA

Downstream 100 bases:

>100_bases
GCCGTTAAAATTCACGATATTTGCCTTTCTAAAAAAAATGCTTTAAAATAATAATGACATAATTATGGGGATGAATAAAA
ATACCGTTTTAGGATGGGCT

Product: DNA polymerase III subunit delta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MDEVIKIVNDIKAGNIKPIYFLMGEEPYYIDKLSEYIEQNVLAEEEKGFNQTVLYGRDVSVEDIVSTAKRYPMMADRQVV
IVKEAQELSRTIDKIEAYVNNPMESTVLVFCYKYKTLDKRKKVTKLLAQNGIVYESKKLYENQVGDWIKRVLAGKKYTID
PKANAMLVEFLGTDLSKINNELEKLQIILPQGTMITPQHIEENIGFSKDYNVFELRKAIGERNQLKAYKIAENFAHNPKE
YPLVMTTGLVFGFFVQLLKYHGLKDKNPKNVASVLGVNPFFLKEYDLAVKNYPMRKVSQIVGALRDIDVKSKGVGANALP
QSDLLKEMLYKIFN

Sequences:

>Translated_334_residues
MDEVIKIVNDIKAGNIKPIYFLMGEEPYYIDKLSEYIEQNVLAEEEKGFNQTVLYGRDVSVEDIVSTAKRYPMMADRQVV
IVKEAQELSRTIDKIEAYVNNPMESTVLVFCYKYKTLDKRKKVTKLLAQNGIVYESKKLYENQVGDWIKRVLAGKKYTID
PKANAMLVEFLGTDLSKINNELEKLQIILPQGTMITPQHIEENIGFSKDYNVFELRKAIGERNQLKAYKIAENFAHNPKE
YPLVMTTGLVFGFFVQLLKYHGLKDKNPKNVASVLGVNPFFLKEYDLAVKNYPMRKVSQIVGALRDIDVKSKGVGANALP
QSDLLKEMLYKIFN
>Mature_334_residues
MDEVIKIVNDIKAGNIKPIYFLMGEEPYYIDKLSEYIEQNVLAEEEKGFNQTVLYGRDVSVEDIVSTAKRYPMMADRQVV
IVKEAQELSRTIDKIEAYVNNPMESTVLVFCYKYKTLDKRKKVTKLLAQNGIVYESKKLYENQVGDWIKRVLAGKKYTID
PKANAMLVEFLGTDLSKINNELEKLQIILPQGTMITPQHIEENIGFSKDYNVFELRKAIGERNQLKAYKIAENFAHNPKE
YPLVMTTGLVFGFFVQLLKYHGLKDKNPKNVASVLGVNPFFLKEYDLAVKNYPMRKVSQIVGALRDIDVKSKGVGANALP
QSDLLKEMLYKIFN

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: NA

Molecular weight: Translated: 38289; Mature: 38289

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVIKIVNDIKAGNIKPIYFLMGEEPYYIDKLSEYIEQNVLAEEEKGFNQTVLYGRDVS
CHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
VEDIVSTAKRYPMMADRQVVIVKEAQELSRTIDKIEAYVNNPMESTVLVFCYKYKTLDKR
HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHH
KKVTKLLAQNGIVYESKKLYENQVGDWIKRVLAGKKYTIDPKANAMLVEFLGTDLSKINN
HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHCCHHHHHHH
ELEKLQIILPQGTMITPQHIEENIGFSKDYNVFELRKAIGERNQLKAYKIAENFAHNPKE
HHHHEEEECCCCCEECHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
YPLVMTTGLVFGFFVQLLKYHGLKDKNPKNVASVLGVNPFFLKEYDLAVKNYPMRKVSQI
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
VGALRDIDVKSKGVGANALPQSDLLKEMLYKIFN
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEVIKIVNDIKAGNIKPIYFLMGEEPYYIDKLSEYIEQNVLAEEEKGFNQTVLYGRDVS
CHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
VEDIVSTAKRYPMMADRQVVIVKEAQELSRTIDKIEAYVNNPMESTVLVFCYKYKTLDKR
HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHH
KKVTKLLAQNGIVYESKKLYENQVGDWIKRVLAGKKYTIDPKANAMLVEFLGTDLSKINN
HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHCCHHHHHHH
ELEKLQIILPQGTMITPQHIEENIGFSKDYNVFELRKAIGERNQLKAYKIAENFAHNPKE
HHHHEEEECCCCCEECHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
YPLVMTTGLVFGFFVQLLKYHGLKDKNPKNVASVLGVNPFFLKEYDLAVKNYPMRKVSQI
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
VGALRDIDVKSKGVGANALPQSDLLKEMLYKIFN
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]