| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300657
Identifier: 146300657
GI number: 146300657
Start: 3450888
End: 3451658
Strand: Direct
Name: 146300657
Synonym: Fjoh_2908
Alternate gene names: NA
Gene position: 3450888-3451658 (Clockwise)
Preceding gene: 146300656
Following gene: 146300658
Centisome position: 56.6
GC content: 29.57
Gene sequence:
>771_bases ATGACCTCAGATAAAAATCATAATTGTATTGATACTAATAAATTAATCAGGGATACTAAAATTAATATTGAAAAATATGG TCTTCAAGTTATCCTAATTGAAGCAACTGATTACTTACCTTCATTTGCTTACAGCATAGGGCTTTGGAAAGAATACAATC ATCCTGAAATTATCTGCTTTGGATTATCAACTTCTCTTTTACATACCATTATAAATGATGTTGCCGAAATAATCAAAAAG AATGAAACAATTGTTGAAGGAAAAAACTATACAAATATTTTTAAAAACAGTAGAGCTGAATTTTTAAAAGTTCATCCCAA TAATATTTTAGACTATTTTGGAACTGCAATTAATTTCTATGAAAGGGAGGATATTCCGGCATTGCAATTAGTTTGGACAG ACAGAAGTAATAAATTCCCTTGGGAAGAAAATTTCGAAGAAGAATTTCTTTACAGACAACCACTATTAGACAGAAATAGT GATTTCAAATTTAGAGAACCCAAAAATCTCACAACTTTTACAACGAGACAATGGCTTCAAGAAGGAAAAACAATTGTAAA GGTTATTCACGATAATGATGGTGATTGGCAGTTTTTGACAGATGATGAAATATCAACTGAAAATATTATAATTGTTGCTT TGGAACAATTAATATTAAAAGACAAAACGCTAAATGAATTATTTGATCTCGAATATGGAGAAGAAGCCCAGAGAAAATTA ATTGGCGATGAATGGGTCCGTAATAATTCAGAGTATAATGATGACGAATAA
Upstream 100 bases:
>100_bases TGGTCTGAAAAAATTGCTAATCTCCTTCCGGAAGAAACTTCGACTATAACAATTGAATTATTGGCAGATGGAAAAAGAGA ATTGAAGTTAAATTGATCGT
Downstream 100 bases:
>100_bases GAGATAAATCTATTTTTGTCTGACCATAAAATGTATAGCAACCGCAAAAAAAATGGCGCAAAAAATAACTTAACATTCGA CATTAGTATTAGCACAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTSDKNHNCIDTNKLIRDTKINIEKYGLQVILIEATDYLPSFAYSIGLWKEYNHPEIICFGLSTSLLHTIINDVAEIIKK NETIVEGKNYTNIFKNSRAEFLKVHPNNILDYFGTAINFYEREDIPALQLVWTDRSNKFPWEENFEEEFLYRQPLLDRNS DFKFREPKNLTTFTTRQWLQEGKTIVKVIHDNDGDWQFLTDDEISTENIIIVALEQLILKDKTLNELFDLEYGEEAQRKL IGDEWVRNNSEYNDDE
Sequences:
>Translated_256_residues MTSDKNHNCIDTNKLIRDTKINIEKYGLQVILIEATDYLPSFAYSIGLWKEYNHPEIICFGLSTSLLHTIINDVAEIIKK NETIVEGKNYTNIFKNSRAEFLKVHPNNILDYFGTAINFYEREDIPALQLVWTDRSNKFPWEENFEEEFLYRQPLLDRNS DFKFREPKNLTTFTTRQWLQEGKTIVKVIHDNDGDWQFLTDDEISTENIIIVALEQLILKDKTLNELFDLEYGEEAQRKL IGDEWVRNNSEYNDDE >Mature_255_residues TSDKNHNCIDTNKLIRDTKINIEKYGLQVILIEATDYLPSFAYSIGLWKEYNHPEIICFGLSTSLLHTIINDVAEIIKKN ETIVEGKNYTNIFKNSRAEFLKVHPNNILDYFGTAINFYEREDIPALQLVWTDRSNKFPWEENFEEEFLYRQPLLDRNSD FKFREPKNLTTFTTRQWLQEGKTIVKVIHDNDGDWQFLTDDEISTENIIIVALEQLILKDKTLNELFDLEYGEEAQRKLI GDEWVRNNSEYNDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30273; Mature: 30142
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDKNHNCIDTNKLIRDTKINIEKYGLQVILIEATDYLPSFAYSIGLWKEYNHPEIICF CCCCCCCCCCCHHHHHHHCCCCCEEECEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEE GLSTSLLHTIINDVAEIIKKNETIVEGKNYTNIFKNSRAEFLKVHPNNILDYFGTAINFY CCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH EREDIPALQLVWTDRSNKFPWEENFEEEFLYRQPLLDRNSDFKFREPKNLTTFTTRQWLQ HCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EGKTIVKVIHDNDGDWQFLTDDEISTENIIIVALEQLILKDKTLNELFDLEYGEEAQRKL CCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEHHHHHHCCHHHHHHHCCCCCCHHHHHH IGDEWVRNNSEYNDDE HHHHHHCCCCCCCCCC >Mature Secondary Structure TSDKNHNCIDTNKLIRDTKINIEKYGLQVILIEATDYLPSFAYSIGLWKEYNHPEIICF CCCCCCCCCCHHHHHHHCCCCCEEECEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEE GLSTSLLHTIINDVAEIIKKNETIVEGKNYTNIFKNSRAEFLKVHPNNILDYFGTAINFY CCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH EREDIPALQLVWTDRSNKFPWEENFEEEFLYRQPLLDRNSDFKFREPKNLTTFTTRQWLQ HCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EGKTIVKVIHDNDGDWQFLTDDEISTENIIIVALEQLILKDKTLNELFDLEYGEEAQRKL CCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEHHHHHHCCHHHHHHHCCCCCCHHHHHH IGDEWVRNNSEYNDDE HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA