Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is yjeE [C]

Identifier: 146300656

GI number: 146300656

Start: 3450476

End: 3450883

Strand: Direct

Name: yjeE [C]

Synonym: Fjoh_2907

Alternate gene names: 146300656

Gene position: 3450476-3450883 (Clockwise)

Preceding gene: 146300655

Following gene: 146300657

Centisome position: 56.59

GC content: 31.13

Gene sequence:

>408_bases
ATGAATATCGTTTTTTCATTAGATCAAATTCAAGAAGCTGCAGAGCAGATTATTGCTTCAAAACCTAAAAAAATCATACT
TTTTAATGGTGAAATGGGGGTTGGAAAAACAACTTTAATTAAACAGTTATGCAAAAGTTTAGGTGTAGAAGATGCAACAA
GCAGTCCCACTTTTTCTTTGGTAAATGAGTATTACACTTCTAATAATCAAATCGTTTATCATTTTGATTTTTACAGATTA
AACAAAGAAACCGAAGCTCTTGATATGGGCGTTGATGATTATTTATACTCAGGAAACTGGTGTTTTATTGAGTGGTCTGA
AAAAATTGCTAATCTCCTTCCGGAAGAAACTTCGACTATAACAATTGAATTATTGGCAGATGGAAAAAGAGAATTGAAGT
TAAATTGA

Upstream 100 bases:

>100_bases
TTGGTATTTAACCCTAAATAAAAAAGTTTTCAGTCGCAGTTTTCAGTCTCAGTCTGAGAAGTGAAAACTGTGACTGAGAC
TAAAATAAATAAACATAAAA

Downstream 100 bases:

>100_bases
TCGTATGACCTCAGATAAAAATCATAATTGTATTGATACTAATAAATTAATCAGGGATACTAAAATTAATATTGAAAAAT
ATGGTCTTCAAGTTATCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSLVNEYYTSNNQIVYHFDFYRL
NKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTITIELLADGKRELKLN

Sequences:

>Translated_135_residues
MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSLVNEYYTSNNQIVYHFDFYRL
NKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTITIELLADGKRELKLN
>Mature_135_residues
MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSLVNEYYTSNNQIVYHFDFYRL
NKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTITIELLADGKRELKLN

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=105, Percent_Identity=38.0952380952381, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 15355; Mature: 15355

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSL
CCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH
VNEYYTSNNQIVYHFDFYRLNKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTI
HHHHHCCCCEEEEEEEEEEECCCCHHHHCCCCCEEECCCEEEEEHHHHHHHHCCCCCCEE
TIELLADGKRELKLN
EEEEEECCCEEEECC
>Mature Secondary Structure
MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSL
CCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH
VNEYYTSNNQIVYHFDFYRLNKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTI
HHHHHCCCCEEEEEEEEEEECCCCHHHHCCCCCEEECCCEEEEEHHHHHHHHCCCCCCEE
TIELLADGKRELKLN
EEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]