| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yjeE [C]
Identifier: 146300656
GI number: 146300656
Start: 3450476
End: 3450883
Strand: Direct
Name: yjeE [C]
Synonym: Fjoh_2907
Alternate gene names: 146300656
Gene position: 3450476-3450883 (Clockwise)
Preceding gene: 146300655
Following gene: 146300657
Centisome position: 56.59
GC content: 31.13
Gene sequence:
>408_bases ATGAATATCGTTTTTTCATTAGATCAAATTCAAGAAGCTGCAGAGCAGATTATTGCTTCAAAACCTAAAAAAATCATACT TTTTAATGGTGAAATGGGGGTTGGAAAAACAACTTTAATTAAACAGTTATGCAAAAGTTTAGGTGTAGAAGATGCAACAA GCAGTCCCACTTTTTCTTTGGTAAATGAGTATTACACTTCTAATAATCAAATCGTTTATCATTTTGATTTTTACAGATTA AACAAAGAAACCGAAGCTCTTGATATGGGCGTTGATGATTATTTATACTCAGGAAACTGGTGTTTTATTGAGTGGTCTGA AAAAATTGCTAATCTCCTTCCGGAAGAAACTTCGACTATAACAATTGAATTATTGGCAGATGGAAAAAGAGAATTGAAGT TAAATTGA
Upstream 100 bases:
>100_bases TTGGTATTTAACCCTAAATAAAAAAGTTTTCAGTCGCAGTTTTCAGTCTCAGTCTGAGAAGTGAAAACTGTGACTGAGAC TAAAATAAATAAACATAAAA
Downstream 100 bases:
>100_bases TCGTATGACCTCAGATAAAAATCATAATTGTATTGATACTAATAAATTAATCAGGGATACTAAAATTAATATTGAAAAAT ATGGTCTTCAAGTTATCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSLVNEYYTSNNQIVYHFDFYRL NKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTITIELLADGKRELKLN
Sequences:
>Translated_135_residues MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSLVNEYYTSNNQIVYHFDFYRL NKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTITIELLADGKRELKLN >Mature_135_residues MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSLVNEYYTSNNQIVYHFDFYRL NKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTITIELLADGKRELKLN
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=105, Percent_Identity=38.0952380952381, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 15355; Mature: 15355
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSL CCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH VNEYYTSNNQIVYHFDFYRLNKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTI HHHHHCCCCEEEEEEEEEEECCCCHHHHCCCCCEEECCCEEEEEHHHHHHHHCCCCCCEE TIELLADGKRELKLN EEEEEECCCEEEECC >Mature Secondary Structure MNIVFSLDQIQEAAEQIIASKPKKIILFNGEMGVGKTTLIKQLCKSLGVEDATSSPTFSL CCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH VNEYYTSNNQIVYHFDFYRLNKETEALDMGVDDYLYSGNWCFIEWSEKIANLLPEETSTI HHHHHCCCCEEEEEEEEEEECCCCHHHHCCCCCEEECCCEEEEEHHHHHHHHCCCCCCEE TIELLADGKRELKLN EEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]