Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300510
Identifier: 146300510
GI number: 146300510
Start: 3293965
End: 3294621
Strand: Direct
Name: 146300510
Synonym: Fjoh_2760
Alternate gene names: NA
Gene position: 3293965-3294621 (Clockwise)
Preceding gene: 146300509
Following gene: 146300511
Centisome position: 54.03
GC content: 28.61
Gene sequence:
>657_bases ATGTTGATTTCTTTTCTATTGGTTTTAGGGGTTTTCTTTTTTATTTTGTTTTTTCTGCCTTTTGAACAAAATATGATTTA CATATGCATTTTATTGATTCTTCCAATAATTCTTCAAGTCATTTACTTAAGAAAAACGATGAAGCATACCACTACGATTA TTGATAATCGCGGTATTCATTATGTAAATAGATTTAATCATAAAATTGAAAATACAATATCATGGAATAGTTTTGAAAAG AGCGACAATTTTAAAGGAAAAATAACGGGAATAAATTCCTCGTCTGATTTGGATCTTTTGCGATATGATGTTTTTGCAAA AATGGTTGGAAGCGGTAAATATAGTCACGAAGCGTTTTTTTGGTTCGTTTCGGCAAACAGAGATATAAAAGCTCACAAAG AAACATTTTCCGGGAATCATATTTTTAGTATGCTTTATTCAAACAAACTTGAATTAGTAAGAGGTTTGCTGCTAGGGTTA TCACACTTTAGACCTGACTTAAAAATTCATCCTAAAGCTTTTAGTATGTATTATATAAATCCTGATACTTTTGCCATAGA ATATGAAAAAAGAAAAGAAGATATTAATTCAGCTCTTTTTATAACGGCACTTGTTATTATAGTTACAGTGTTTGTAATGC TTTTTGTTTTCTTTTAA
Upstream 100 bases:
>100_bases GTTTTTAATGCCTATGAACAGCCAAACAAAAAATCTTCCTCCATTTAATTCCGTAACTTCAAGTCCGTCAAAAATCAAAA ATTATGGTTTAGGTTTTCTA
Downstream 100 bases:
>100_bases ATTTTTCGTTAAAAGAACTTTTTATACTTGTAAAACTTAATTTCAATTCAATTTTGCAGGTTTAAAAAATAGTATTATTC TTGCAATTGTTTTTAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MLISFLLVLGVFFFILFFLPFEQNMIYICILLILPIILQVIYLRKTMKHTTTIIDNRGIHYVNRFNHKIENTISWNSFEK SDNFKGKITGINSSSDLDLLRYDVFAKMVGSGKYSHEAFFWFVSANRDIKAHKETFSGNHIFSMLYSNKLELVRGLLLGL SHFRPDLKIHPKAFSMYYINPDTFAIEYEKRKEDINSALFITALVIIVTVFVMLFVFF
Sequences:
>Translated_218_residues MLISFLLVLGVFFFILFFLPFEQNMIYICILLILPIILQVIYLRKTMKHTTTIIDNRGIHYVNRFNHKIENTISWNSFEK SDNFKGKITGINSSSDLDLLRYDVFAKMVGSGKYSHEAFFWFVSANRDIKAHKETFSGNHIFSMLYSNKLELVRGLLLGL SHFRPDLKIHPKAFSMYYINPDTFAIEYEKRKEDINSALFITALVIIVTVFVMLFVFF >Mature_218_residues MLISFLLVLGVFFFILFFLPFEQNMIYICILLILPIILQVIYLRKTMKHTTTIIDNRGIHYVNRFNHKIENTISWNSFEK SDNFKGKITGINSSSDLDLLRYDVFAKMVGSGKYSHEAFFWFVSANRDIKAHKETFSGNHIFSMLYSNKLELVRGLLLGL SHFRPDLKIHPKAFSMYYINPDTFAIEYEKRKEDINSALFITALVIIVTVFVMLFVFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25538; Mature: 25538
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISFLLVLGVFFFILFFLPFEQNMIYICILLILPIILQVIYLRKTMKHTTTIIDNRGIH CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH YVNRFNHKIENTISWNSFEKSDNFKGKITGINSSSDLDLLRYDVFAKMVGSGKYSHEAFF HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEE WFVSANRDIKAHKETFSGNHIFSMLYSNKLELVRGLLLGLSHFRPDLKIHPKAFSMYYIN EEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEEC PDTFAIEYEKRKEDINSALFITALVIIVTVFVMLFVFF CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLISFLLVLGVFFFILFFLPFEQNMIYICILLILPIILQVIYLRKTMKHTTTIIDNRGIH CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH YVNRFNHKIENTISWNSFEKSDNFKGKITGINSSSDLDLLRYDVFAKMVGSGKYSHEAFF HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEE WFVSANRDIKAHKETFSGNHIFSMLYSNKLELVRGLLLGLSHFRPDLKIHPKAFSMYYIN EEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEEC PDTFAIEYEKRKEDINSALFITALVIIVTVFVMLFVFF CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA