Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
---|---|
Accession | NC_009441 |
Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300511
Identifier: 146300511
GI number: 146300511
Start: 3294796
End: 3295674
Strand: Direct
Name: 146300511
Synonym: Fjoh_2761
Alternate gene names: NA
Gene position: 3294796-3295674 (Clockwise)
Preceding gene: 146300510
Following gene: 146300512
Centisome position: 54.04
GC content: 29.69
Gene sequence:
>879_bases ATGGATAAATATTATAAACCATCAGGGAGATTTTCATTAATTTTTCTCTTCTATTTTTTGTTAGTTAGTGTTATAGCATT TCCAATATTAGGATTAATATATGCTTATTTCATTTGGTACATTCCTTTTATATACATCAACTTTTTCATCACAATAGGCT TTGGGTTTCTCATAGGCTTTTTCATTTCTATAATAGTTATTAAAAAAGGAAAAGTAAGGAATCCGCTTTTGGGATTTATT ATTGGATTAGCCGGGGCCTTTTTGGCTTTATATTTTCACTGGGCTATCTGGATAGATTTAGTAATTAATGCCGGAGAAAG TTATGGTTCAAACAGAATAGGGATTACAGTAAGCAATATTCAGTTTTTACAGGTTTTTTCATTGATATTTCGACCAGATC TGGTTTTTGAATATATAAATCAAGTTAATGGATATGGCACATGGGGTATTCGCGGAGCGACAGTCAGCGGTACATTTCTG TGGATAATTTGGGCAATAGAATTTATTATAGTTGTTGCAATTTCCGGGTTTCTTCCATATTTAGAAGCAAAGAAACCTTT TTCTGAATCTAATAATTCATGGTATCAAGAAATTATTCTGCCTCCATTTAACTATATTGAAAATCAACAGCAGATAATAG CAGATCTACTGGCAGGTAATCGTGATATTTTTGATTTATTAAATGAAAATGTTGACAGTGAGAAAGATAGTCATAGTGTA TTTACACTTTATAGATCCAAATCAGGAAAAAACTATTTGTCGATAGATAATAAGACATCAAAAATAGATAATAAAGGCAA TATTAAATTTGATAGTAATCAGATTGTAGAATATATAGCAGTTAATAGTGAATTGTCAAAATTATTGCTTGATAAATAA
Upstream 100 bases:
>100_bases TTATTCTTGCAATTGTTTTTAATGATAAAGTTTTAATGGGTTTAGCATTTGACTTTTGCTTGTAGCCCATTAAAAAAATA ATAAAATTATTTACTGTTAC
Downstream 100 bases:
>100_bases TAAGTTGCTTATCTGTTTGTAATTACAAATATTTGTAGTAATTTTGCAAACCTTTTGGCAGAGAAGAGTTTCCTTTAGGT ATCAACCATTTATGTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDKYYKPSGRFSLIFLFYFLLVSVIAFPILGLIYAYFIWYIPFIYINFFITIGFGFLIGFFISIIVIKKGKVRNPLLGFI IGLAGAFLALYFHWAIWIDLVINAGESYGSNRIGITVSNIQFLQVFSLIFRPDLVFEYINQVNGYGTWGIRGATVSGTFL WIIWAIEFIIVVAISGFLPYLEAKKPFSESNNSWYQEIILPPFNYIENQQQIIADLLAGNRDIFDLLNENVDSEKDSHSV FTLYRSKSGKNYLSIDNKTSKIDNKGNIKFDSNQIVEYIAVNSELSKLLLDK
Sequences:
>Translated_292_residues MDKYYKPSGRFSLIFLFYFLLVSVIAFPILGLIYAYFIWYIPFIYINFFITIGFGFLIGFFISIIVIKKGKVRNPLLGFI IGLAGAFLALYFHWAIWIDLVINAGESYGSNRIGITVSNIQFLQVFSLIFRPDLVFEYINQVNGYGTWGIRGATVSGTFL WIIWAIEFIIVVAISGFLPYLEAKKPFSESNNSWYQEIILPPFNYIENQQQIIADLLAGNRDIFDLLNENVDSEKDSHSV FTLYRSKSGKNYLSIDNKTSKIDNKGNIKFDSNQIVEYIAVNSELSKLLLDK >Mature_292_residues MDKYYKPSGRFSLIFLFYFLLVSVIAFPILGLIYAYFIWYIPFIYINFFITIGFGFLIGFFISIIVIKKGKVRNPLLGFI IGLAGAFLALYFHWAIWIDLVINAGESYGSNRIGITVSNIQFLQVFSLIFRPDLVFEYINQVNGYGTWGIRGATVSGTFL WIIWAIEFIIVVAISGFLPYLEAKKPFSESNNSWYQEIILPPFNYIENQQQIIADLLAGNRDIFDLLNENVDSEKDSHSV FTLYRSKSGKNYLSIDNKTSKIDNKGNIKFDSNQIVEYIAVNSELSKLLLDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33499; Mature: 33499
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKYYKPSGRFSLIFLFYFLLVSVIAFPILGLIYAYFIWYIPFIYINFFITIGFGFLIGF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FISIIVIKKGKVRNPLLGFIIGLAGAFLALYFHWAIWIDLVINAGESYGSNRIGITVSNI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCH QFLQVFSLIFRPDLVFEYINQVNGYGTWGIRGATVSGTFLWIIWAIEFIIVVAISGFLPY HHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LEAKKPFSESNNSWYQEIILPPFNYIENQQQIIADLLAGNRDIFDLLNENVDSEKDSHSV HHCCCCCCCCCCCHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCE FTLYRSKSGKNYLSIDNKTSKIDNKGNIKFDSNQIVEYIAVNSELSKLLLDK EEEEECCCCCCEEEECCCHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDKYYKPSGRFSLIFLFYFLLVSVIAFPILGLIYAYFIWYIPFIYINFFITIGFGFLIGF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FISIIVIKKGKVRNPLLGFIIGLAGAFLALYFHWAIWIDLVINAGESYGSNRIGITVSNI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCH QFLQVFSLIFRPDLVFEYINQVNGYGTWGIRGATVSGTFLWIIWAIEFIIVVAISGFLPY HHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LEAKKPFSESNNSWYQEIILPPFNYIENQQQIIADLLAGNRDIFDLLNENVDSEKDSHSV HHCCCCCCCCCCCHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCE FTLYRSKSGKNYLSIDNKTSKIDNKGNIKFDSNQIVEYIAVNSELSKLLLDK EEEEECCCCCCEEEECCCHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA