Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is yxiO [H]
Identifier: 146300498
GI number: 146300498
Start: 3280433
End: 3281752
Strand: Direct
Name: yxiO [H]
Synonym: Fjoh_2748
Alternate gene names: 146300498
Gene position: 3280433-3281752 (Clockwise)
Preceding gene: 146300497
Following gene: 146300503
Centisome position: 53.81
GC content: 32.95
Gene sequence:
>1320_bases ATGAAAAACCTACAAAAAGGAGATAAGAAACTTTTAAATGCCTGGGCATTTTATGACTGGGCAAATTCAGTTTATACTTT AACAATTGCATCTGCAGTATTTCCAATTTTTTATGAAACCTTATTCAGCGATCGTGATCATTATATAGATGTTTTTGGAA TGCATCTTAAAAATTCAGCATTAATAAGTTTTATAACCGCTTTTGCTTTTATGGTGGTTTCATTTATTTCACCTTTATTG TCTGGTATTGCTGATTATGTTGGAAACAAGAAATCTTTCATGAAGTTTTTCTGTTATGTAGGGGCTTTATCTTGTATGGG ATTATATTGGTTTGACCTGGATAATATTTATGTTGGTCTTTTATTTTATTTTCTTGGACTTCTTGGATATTGGGGAAGTT TAGTTTTTTACAACTCATACCTTCCGGATATTGCATTTGAAGAGCAGCAAGACAGAATTAGTGCAAAAGGATATTCATTA GGATACATTGGAAGTGTTATTTTGTTGATAATCAATTTAGCAATGATAATGAAGCCGGAAGTCTTTAATATTACGGGAGA TGGTGCAGCGATGAAAGCAATGCGTTATTCTTTTGTAATGGTAGGAGTTTGGTGGATTTTATTCAGCCAGTATACTTATT ACTATTTACCAAAAGGGAGTAAAGAAACGGGACAAAAACTAACAAGATCTGTTGTATTTAATGGCTTTAAAGAATTAAAA AAGGTTTGGGCGTTATTGAAACAGAATATTCCTTTAAAACGTTATTTAGGAGGTTTCTTTGTTTCCAGCATGGCTGTTCA GACTGTAATGCTGGTTGCTACTTATTTTGGTGCACAGGAAATACAATGGTCATCTAAGGAAGAAAGCACTATTGGTTTAA TTGTCTGTATTTTAATAATTCAATTAGTAGCCGTAGTTGGAGCGGTTCTAACTTCAAGAGCTTCAGAAAAATTTGGCAAC GTTCCAACTTTAATATTTATTAACGGAATCTGGGCTGTATTTTGTGCTCTTGCATTTTTTATTACGCTGCCAATGCATTT TTATGTTATGGCAACAATTGCAGGATTTGTAATGGGAGGAATTCAGGCATTATCTCGATCAACATATTCAAAACTATTAC CGGAAACAGAAGACACAGCATCATTCTTTAGTTTTTATGATGTTGCAGAAAAAATAGGAATTGTAATTGGAATGTGTGTT TACGGAATTATCGATCAAATCACAGGAAGCCCGCGTGCTGCAATTGTAATTTTAGGTATTTTCTTCGTTACAGCTATTTT CTTATTAAGAAGAGTACATAAAAAAGACGTTTCAAACTAA
Upstream 100 bases:
>100_bases TAGCTCAAGTTCATAATTTAATAATGTACGAATTGAATAATTTCTATTTGTTTATCATAAAAAATAGATAAATTCGTAGC CTGTTAACAAAATCATTTCT
Downstream 100 bases:
>100_bases TCGAAACGTCTTTAATAACAACCAATATCACGAATTACATGAAATTATTTGATTGATGATTTTTTTGTAATTCGTGATAT TTCATTTAAATAATCAACCT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYETLFSDRDHYIDVFGMHLKNSALISFITAFAFMVVSFISPLL SGIADYVGNKKSFMKFFCYVGALSCMGLYWFDLDNIYVGLLFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSL GYIGSVILLIINLAMIMKPEVFNITGDGAAMKAMRYSFVMVGVWWILFSQYTYYYLPKGSKETGQKLTRSVVFNGFKELK KVWALLKQNIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIVCILIIQLVAVVGAVLTSRASEKFGN VPTLIFINGIWAVFCALAFFITLPMHFYVMATIAGFVMGGIQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCV YGIIDQITGSPRAAIVILGIFFVTAIFLLRRVHKKDVSN
Sequences:
>Translated_439_residues MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYETLFSDRDHYIDVFGMHLKNSALISFITAFAFMVVSFISPLL SGIADYVGNKKSFMKFFCYVGALSCMGLYWFDLDNIYVGLLFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSL GYIGSVILLIINLAMIMKPEVFNITGDGAAMKAMRYSFVMVGVWWILFSQYTYYYLPKGSKETGQKLTRSVVFNGFKELK KVWALLKQNIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIVCILIIQLVAVVGAVLTSRASEKFGN VPTLIFINGIWAVFCALAFFITLPMHFYVMATIAGFVMGGIQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCV YGIIDQITGSPRAAIVILGIFFVTAIFLLRRVHKKDVSN >Mature_439_residues MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYETLFSDRDHYIDVFGMHLKNSALISFITAFAFMVVSFISPLL SGIADYVGNKKSFMKFFCYVGALSCMGLYWFDLDNIYVGLLFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSL GYIGSVILLIINLAMIMKPEVFNITGDGAAMKAMRYSFVMVGVWWILFSQYTYYYLPKGSKETGQKLTRSVVFNGFKELK KVWALLKQNIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIVCILIIQLVAVVGAVLTSRASEKFGN VPTLIFINGIWAVFCALAFFITLPMHFYVMATIAGFVMGGIQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCV YGIIDQITGSPRAAIVILGIFFVTAIFLLRRVHKKDVSN
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49346; Mature: 49346
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYETLFSDRDHYIDVFGMHLKNSA CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LISFITAFAFMVVSFISPLLSGIADYVGNKKSFMKFFCYVGALSCMGLYWFDLDNIYVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSLGYIGSVILLIINLAMIMKPE HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC VFNITGDGAAMKAMRYSFVMVGVWWILFSQYTYYYLPKGSKETGQKLTRSVVFNGFKELK EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH KVWALLKQNIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIVCILII HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHH QLVAVVGAVLTSRASEKFGNVPTLIFINGIWAVFCALAFFITLPMHFYVMATIAGFVMGG HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCVYGIIDQITGSPRAAIVILGI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FFVTAIFLLRRVHKKDVSN HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYETLFSDRDHYIDVFGMHLKNSA CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LISFITAFAFMVVSFISPLLSGIADYVGNKKSFMKFFCYVGALSCMGLYWFDLDNIYVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSLGYIGSVILLIINLAMIMKPE HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC VFNITGDGAAMKAMRYSFVMVGVWWILFSQYTYYYLPKGSKETGQKLTRSVVFNGFKELK EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH KVWALLKQNIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIVCILII HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHH QLVAVVGAVLTSRASEKFGNVPTLIFINGIWAVFCALAFFITLPMHFYVMATIAGFVMGG HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCVYGIIDQITGSPRAAIVILGI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FFVTAIFLLRRVHKKDVSN HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]