Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300503
Identifier: 146300503
GI number: 146300503
Start: 3284972
End: 3285664
Strand: Direct
Name: 146300503
Synonym: Fjoh_2753
Alternate gene names: NA
Gene position: 3284972-3285664 (Clockwise)
Preceding gene: 146300498
Following gene: 146300504
Centisome position: 53.88
GC content: 32.76
Gene sequence:
>693_bases ATGAAAAAACTAAAAAGCCTAATGTTAATGACATTATTTGTGTCAACAACTTTATTTACATCATGTTCAAGTGATTCTGG AAGCGATGATCCGTCACCAGAAAATTCTCAAGGAGATTATTGGCCGGCAGCAGCTGGCAATCAATGGGTTTTCAGCCAAA ATGGAACTGAAACTTCAATGAAAATTGTCAGCTCACAAAAAGTAAACAACGATACTTATTTTAAATTCGACAAATTATTT GTATCGTCTTCTAGTGAAGTTCCAGGTTCAGCATCAGCATCGATTAAAAAAGTGCAGGGAGATTACTTTATCAAACTAGA TGATATTAATGTTAGTGCAAATGGTTTTTCTGGAAAAATAAGCGGGTATGAATTTATTTTCTTTAAGGATTATTTAGATG TAAATAAAACCTGGACAGGAACTTATACACAAGAAACCACATATACTGGCTTTGGAACTATTAAAACAACAACAAAATAC ACGGGTACAATCTTAGAAAAAGGAATAACTGCCGTTGTAAAAAATGTAACTCATAAGGATGTTATTAGGTTTAAACTAAA ACTTGAAACATCATTAGAAGGACAGAGTGCCGGTTCTACCGAAGCAGAATATTGGATTGCTAAAGGTGTAGGGGTTATTA AGTTTAATTATAATGATTCAGCTTCAGAACTAGCTTCTTACAAAATAAATTAA
Upstream 100 bases:
>100_bases ATTTTTTTTCTTTTACGTAAAGCCGTAAGGAAAAATAAAATGATCGGTTTATTTTTGGTTAGAAATTTACCTACAATATA CCATTAACAAATCTAAAACT
Downstream 100 bases:
>100_bases GAATATTCCAAATAAAGATTTTAAAAGCCGAAATTAACTTTCGGCTTTTTTTATACTATTAAAACAATTCAAAACTGCCG ATTTTTGGATTTGGCATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKKLKSLMLMTLFVSTTLFTSCSSDSGSDDPSPENSQGDYWPAAAGNQWVFSQNGTETSMKIVSSQKVNNDTYFKFDKLF VSSSSEVPGSASASIKKVQGDYFIKLDDINVSANGFSGKISGYEFIFFKDYLDVNKTWTGTYTQETTYTGFGTIKTTTKY TGTILEKGITAVVKNVTHKDVIRFKLKLETSLEGQSAGSTEAEYWIAKGVGVIKFNYNDSASELASYKIN
Sequences:
>Translated_230_residues MKKLKSLMLMTLFVSTTLFTSCSSDSGSDDPSPENSQGDYWPAAAGNQWVFSQNGTETSMKIVSSQKVNNDTYFKFDKLF VSSSSEVPGSASASIKKVQGDYFIKLDDINVSANGFSGKISGYEFIFFKDYLDVNKTWTGTYTQETTYTGFGTIKTTTKY TGTILEKGITAVVKNVTHKDVIRFKLKLETSLEGQSAGSTEAEYWIAKGVGVIKFNYNDSASELASYKIN >Mature_230_residues MKKLKSLMLMTLFVSTTLFTSCSSDSGSDDPSPENSQGDYWPAAAGNQWVFSQNGTETSMKIVSSQKVNNDTYFKFDKLF VSSSSEVPGSASASIKKVQGDYFIKLDDINVSANGFSGKISGYEFIFFKDYLDVNKTWTGTYTQETTYTGFGTIKTTTKY TGTILEKGITAVVKNVTHKDVIRFKLKLETSLEGQSAGSTEAEYWIAKGVGVIKFNYNDSASELASYKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25319; Mature: 25319
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLKSLMLMTLFVSTTLFTSCSSDSGSDDPSPENSQGDYWPAAAGNQWVFSQNGTETSM CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHE KIVSSQKVNNDTYFKFDKLFVSSSSEVPGSASASIKKVQGDYFIKLDDINVSANGFSGKI EEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCEEECCCCCCCC SGYEFIFFKDYLDVNKTWTGTYTQETTYTGFGTIKTTTKYTGTILEKGITAVVKNVTHKD CCEEEEEEEEECCCCCEECCCEECCEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCC VIRFKLKLETSLEGQSAGSTEAEYWIAKGVGVIKFNYNDSASELASYKIN EEEEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHEECCC >Mature Secondary Structure MKKLKSLMLMTLFVSTTLFTSCSSDSGSDDPSPENSQGDYWPAAAGNQWVFSQNGTETSM CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHE KIVSSQKVNNDTYFKFDKLFVSSSSEVPGSASASIKKVQGDYFIKLDDINVSANGFSGKI EEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCEEECCCCCCCC SGYEFIFFKDYLDVNKTWTGTYTQETTYTGFGTIKTTTKYTGTILEKGITAVVKNVTHKD CCEEEEEEEEECCCCCEECCCEECCEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCC VIRFKLKLETSLEGQSAGSTEAEYWIAKGVGVIKFNYNDSASELASYKIN EEEEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA