| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300445
Identifier: 146300445
GI number: 146300445
Start: 3206417
End: 3208222
Strand: Reverse
Name: 146300445
Synonym: Fjoh_2694
Alternate gene names: NA
Gene position: 3208222-3206417 (Counterclockwise)
Preceding gene: 146300446
Following gene: 146300444
Centisome position: 52.62
GC content: 29.29
Gene sequence:
>1806_bases GTGGAGGAAATAAAAAATGATTCACTAAATAACAGAATTAGTAATACTAAAGAATCTCTAAAATTTATTTATCAGCTAGA AGGGCTAACTTTTACGATTGATAAATATCAACGAGGTTACCGCTGGGGAATTAGAGAAATTCATTCATTATTAAATGACA TAATTACTTTTAATTCTAGTAAAGAAAGCTTCTATTGCCTACAACCGCTTGTTTTAAAAAAAAAGGAGGAAACTATTTAT GAATTAATTGATGGTCAACAACGCTCAACGACAATCTATCTTATTTTAAAATATTTGCTTAATAGCGACTTCTTTAATTT AAAATACGAGACAAGAGGTAACAAAGATGGTGTAAATAGGTTTCTAGGACAATTAAATAATTACAACATCCTCGATTTTA TTGAAATTAGCGAGGAGCAGCTTGATCGTGAAATATCAGATTACTGGAAAAAAAATTTTATTAATACATATGGGATAACT GACAGTGTTGATAATTTCTACTTTTTTAAGGCATACTGTATAATAAAGCGATGGTTTTGTATTGCTGAGGAAAGAAAAGA AGTTGTACATAGAAACCTCCTGTATAGGACCAAAGTAATATGGTATACAGAAAAAAGCACGACAGATAATGCTACCAACA CATTTATAAATTTTAATGATGGAAAGATTAACCTTGATCAGGCAGAATTAATCAAGGGACTATATGTACTTGAATTAAAT AGCATATCAGATGCTACTCGTAAAGCATACGAAGAAAATCAATTTGCAGATGAATGGAATGCAATTGAACATCATTTAAA AATACCTTCTTTTTGGAGTTTTATAAATAGTGAAAAGGATAATAGGGAAATAGCAAATAAAATTACTCTCTTATTACAAC TTGAAAAAGGTAAAGGCAAAAAAACAGAAGATCTTTTTTACACCTATCGTGAATATGAAAAAGCTTTTAATTCTGACAAA AAGCCTGAATGGAGAAATCTTTCTTCTCTTTATAGCCAATTGGAAGAATGGTTTAACAATAGAGAAACCTATCATTTATT AGGCGCATTAGTTCATCTCACCAACAAATCTGTTCATGATATTATTGTAAAGTATAAAGAGAAATCAAACAAAGAAGAAT TAAATAATTATTTAAGACAAATTCTGGTAGAGGAGTTTTTTCAAGACGAAAAAAGTTTCAAAAGCAAATACAATCCTGAC GAAATAAAGTATGGTAAATATAGCGTATTTCAAATTTTACTAATATATAATATAGCTGTTGCACAACTAACAGACAAATA TTATAAATTTCCATTCGATTTATTTAAGAAAGTCAAGCTATGGAATATCGAACATATCTATGCTAAGAATTCAAAAGGCT TCGAAAATCTTGACGATTTAAATGACTGGTATAATGAACTTCAAGAGATAACACAAGATTTAGAATTAAATGCAGAATAT CTAAAATTATGGGCGGAAATTGACCTATCAGACTTAGCTAAAACAAATACTGTCGTGAAAAATATCGAGAGTCAATTACT TGAAATATTTGACAAAGACAGTATTTCAAATCTATGCCTTTTGGATAATTTGACAAATATTAGAGTTGGTAACAAGGTCT TTAGAAAAAAACGCGAAATGGTACTTGGAATCAATAACTTAATTGACGACGGAGCCTATATTCCTTTAGCTACAAAAATG GTATTCCAAAAAGCAATGACTCCTTCAGATAAAATTACCATGAACTACTGGAATACTATGGATAGAGAAGCATATGTGGA AGATATAAAAAATAAAATAAAACAATTTTTAGGTGTACCGCTATGA
Upstream 100 bases:
>100_bases CATAATTATCTTTTTAAAATTAATTTTTAGTATCAAGAAGTAGTTAAGAAACTAATAAACAATTTGCTGTAAATTAAAAC CAAATCACACTAATATACAC
Downstream 100 bases:
>100_bases TGAAGAATTATTCTTTTTTTGAACTAATTAATCAGTATATTATAGAAATTCCTATAATACAAAGAGATTACGCCCAAGGT AGAGAGCAAGAAAATGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MEEIKNDSLNNRISNTKESLKFIYQLEGLTFTIDKYQRGYRWGIREIHSLLNDIITFNSSKESFYCLQPLVLKKKEETIY ELIDGQQRSTTIYLILKYLLNSDFFNLKYETRGNKDGVNRFLGQLNNYNILDFIEISEEQLDREISDYWKKNFINTYGIT DSVDNFYFFKAYCIIKRWFCIAEERKEVVHRNLLYRTKVIWYTEKSTTDNATNTFINFNDGKINLDQAELIKGLYVLELN SISDATRKAYEENQFADEWNAIEHHLKIPSFWSFINSEKDNREIANKITLLLQLEKGKGKKTEDLFYTYREYEKAFNSDK KPEWRNLSSLYSQLEEWFNNRETYHLLGALVHLTNKSVHDIIVKYKEKSNKEELNNYLRQILVEEFFQDEKSFKSKYNPD EIKYGKYSVFQILLIYNIAVAQLTDKYYKFPFDLFKKVKLWNIEHIYAKNSKGFENLDDLNDWYNELQEITQDLELNAEY LKLWAEIDLSDLAKTNTVVKNIESQLLEIFDKDSISNLCLLDNLTNIRVGNKVFRKKREMVLGINNLIDDGAYIPLATKM VFQKAMTPSDKITMNYWNTMDREAYVEDIKNKIKQFLGVPL
Sequences:
>Translated_601_residues MEEIKNDSLNNRISNTKESLKFIYQLEGLTFTIDKYQRGYRWGIREIHSLLNDIITFNSSKESFYCLQPLVLKKKEETIY ELIDGQQRSTTIYLILKYLLNSDFFNLKYETRGNKDGVNRFLGQLNNYNILDFIEISEEQLDREISDYWKKNFINTYGIT DSVDNFYFFKAYCIIKRWFCIAEERKEVVHRNLLYRTKVIWYTEKSTTDNATNTFINFNDGKINLDQAELIKGLYVLELN SISDATRKAYEENQFADEWNAIEHHLKIPSFWSFINSEKDNREIANKITLLLQLEKGKGKKTEDLFYTYREYEKAFNSDK KPEWRNLSSLYSQLEEWFNNRETYHLLGALVHLTNKSVHDIIVKYKEKSNKEELNNYLRQILVEEFFQDEKSFKSKYNPD EIKYGKYSVFQILLIYNIAVAQLTDKYYKFPFDLFKKVKLWNIEHIYAKNSKGFENLDDLNDWYNELQEITQDLELNAEY LKLWAEIDLSDLAKTNTVVKNIESQLLEIFDKDSISNLCLLDNLTNIRVGNKVFRKKREMVLGINNLIDDGAYIPLATKM VFQKAMTPSDKITMNYWNTMDREAYVEDIKNKIKQFLGVPL >Mature_601_residues MEEIKNDSLNNRISNTKESLKFIYQLEGLTFTIDKYQRGYRWGIREIHSLLNDIITFNSSKESFYCLQPLVLKKKEETIY ELIDGQQRSTTIYLILKYLLNSDFFNLKYETRGNKDGVNRFLGQLNNYNILDFIEISEEQLDREISDYWKKNFINTYGIT DSVDNFYFFKAYCIIKRWFCIAEERKEVVHRNLLYRTKVIWYTEKSTTDNATNTFINFNDGKINLDQAELIKGLYVLELN SISDATRKAYEENQFADEWNAIEHHLKIPSFWSFINSEKDNREIANKITLLLQLEKGKGKKTEDLFYTYREYEKAFNSDK KPEWRNLSSLYSQLEEWFNNRETYHLLGALVHLTNKSVHDIIVKYKEKSNKEELNNYLRQILVEEFFQDEKSFKSKYNPD EIKYGKYSVFQILLIYNIAVAQLTDKYYKFPFDLFKKVKLWNIEHIYAKNSKGFENLDDLNDWYNELQEITQDLELNAEY LKLWAEIDLSDLAKTNTVVKNIESQLLEIFDKDSISNLCLLDNLTNIRVGNKVFRKKREMVLGINNLIDDGAYIPLATKM VFQKAMTPSDKITMNYWNTMDREAYVEDIKNKIKQFLGVPL
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71599; Mature: 71599
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIKNDSLNNRISNTKESLKFIYQLEGLTFTIDKYQRGYRWGIREIHSLLNDIITFNSS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCHHHHHHHHHHHHHHHHHHCCCC KESFYCLQPLVLKKKEETIYELIDGQQRSTTIYLILKYLLNSDFFNLKYETRGNKDGVNR CCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH FLGQLNNYNILDFIEISEEQLDREISDYWKKNFINTYGITDSVDNFYFFKAYCIIKRWFC HHHCCCCCCEEEHEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH IAEERKEVVHRNLLYRTKVIWYTEKSTTDNATNTFINFNDGKINLDQAELIKGLYVLELN HHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEECCCEEECCHHHHHCCEEEEEEC SISDATRKAYEENQFADEWNAIEHHLKIPSFWSFINSEKDNREIANKITLLLQLEKGKGK CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHEEEEEEECCCCC KTEDLFYTYREYEKAFNSDKKPEWRNLSSLYSQLEEWFNNRETYHLLGALVHLTNKSVHD CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH IIVKYKEKSNKEELNNYLRQILVEEFFQDEKSFKSKYNPDEIKYGKYSVFQILLIYNIAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH AQLTDKYYKFPFDLFKKVKLWNIEHIYAKNSKGFENLDDLNDWYNELQEITQDLELNAEY HHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH LKLWAEIDLSDLAKTNTVVKNIESQLLEIFDKDSISNLCLLDNLTNIRVGNKVFRKKREM HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHH VLGINNLIDDGAYIPLATKMVFQKAMTPSDKITMNYWNTMDREAYVEDIKNKIKQFLGVP HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHCCC L C >Mature Secondary Structure MEEIKNDSLNNRISNTKESLKFIYQLEGLTFTIDKYQRGYRWGIREIHSLLNDIITFNSS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCHHHHHHHHHHHHHHHHHHCCCC KESFYCLQPLVLKKKEETIYELIDGQQRSTTIYLILKYLLNSDFFNLKYETRGNKDGVNR CCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH FLGQLNNYNILDFIEISEEQLDREISDYWKKNFINTYGITDSVDNFYFFKAYCIIKRWFC HHHCCCCCCEEEHEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH IAEERKEVVHRNLLYRTKVIWYTEKSTTDNATNTFINFNDGKINLDQAELIKGLYVLELN HHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEECCCEEECCHHHHHCCEEEEEEC SISDATRKAYEENQFADEWNAIEHHLKIPSFWSFINSEKDNREIANKITLLLQLEKGKGK CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHEEEEEEECCCCC KTEDLFYTYREYEKAFNSDKKPEWRNLSSLYSQLEEWFNNRETYHLLGALVHLTNKSVHD CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH IIVKYKEKSNKEELNNYLRQILVEEFFQDEKSFKSKYNPDEIKYGKYSVFQILLIYNIAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH AQLTDKYYKFPFDLFKKVKLWNIEHIYAKNSKGFENLDDLNDWYNELQEITQDLELNAEY HHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH LKLWAEIDLSDLAKTNTVVKNIESQLLEIFDKDSISNLCLLDNLTNIRVGNKVFRKKREM HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHH VLGINNLIDDGAYIPLATKMVFQKAMTPSDKITMNYWNTMDREAYVEDIKNKIKQFLGVP HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA