Click here to switch to the map view.

The map label for this gene is 146300422

Identifier: 146300422

GI number: 146300422

Start: 3181733

End: 3182308

Strand: Direct

Name: 146300422

Synonym: Fjoh_2671

Alternate gene names: NA

Gene position: 3181733-3182308 (Clockwise)

Preceding gene: 146300421

Following gene: 146300423

Centisome position: 52.19

GC content: 35.59

Gene sequence:

>576_bases
ATGGCATTAAAAGGACAAAAGACAACAAGTGATTTTTTAGAGTGGAACAAAATGCAGACTATCGTTTTGAAACTGGAGAG
AGACAATGATTTGAAATTTGCATTGCTGATTGCAACAGGTTCTTATATTGGTCTGAGGATTTCTGACCTACTACAGCTTC
GTTGGAATCAGGTTTTGAATGAGGAGCATTTTATCATTACGGAAAGGAAAACCAAGAAAATCCGAAAAGTGACTATCAAT
CCAGAACTGCAAATCATACTTAAAAGATTGTTTGTCCAGCTTGAAGCCAAAGAAACTGATTTGATGTTTGCCAATAGGTC
TGGAGATAAACCGTTCAGTACACAGTATGTGAACAGTAAACTCAAAGATATATTCACTAAATACAATGTAAAAGGTCAGT
ATTCAAGCCATTTTATGAGAAAAACGCTAGGTCGCAGAGTCTGGGAAGTAAACAAATATAGTGACCAAGCATTATTGTTA
TTGTCCCAGCTGTTCAATCATACCAGCGTTTCAACTACTAAAATCTATCTAGGAATCAGAGAACAAGAGATAAGTAACCT
ATATTTGAGCATATAG

Upstream 100 bases:

>100_bases
CATATAAACCCAATGAAATCAATGGTTTACATGGTATAAAGAATTGACCGCTTTCAGATACATATATTAAGGTATAAAAG
TGAAACTAAAATCAAGCAAA

Downstream 100 bases:

>100_bases
CCAAAAAATTATTCGTAAAAATTTCATTGATTTTAATGATTTTTTTTAAATAAATATTGAGAAAGTAAAAATTAAAACCA
TATAAATCTATATGAATTTG

Product: phage integrase family protein

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase; LOW QUALITY PROTEIN Integrase

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MALKGQKTTSDFLEWNKMQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLNEEHFIITERKTKKIRKVTIN
PELQIILKRLFVQLEAKETDLMFANRSGDKPFSTQYVNSKLKDIFTKYNVKGQYSSHFMRKTLGRRVWEVNKYSDQALLL
LSQLFNHTSVSTTKIYLGIREQEISNLYLSI

Sequences:

>Translated_191_residues
MALKGQKTTSDFLEWNKMQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLNEEHFIITERKTKKIRKVTIN
PELQIILKRLFVQLEAKETDLMFANRSGDKPFSTQYVNSKLKDIFTKYNVKGQYSSHFMRKTLGRRVWEVNKYSDQALLL
LSQLFNHTSVSTTKIYLGIREQEISNLYLSI
>Mature_190_residues
ALKGQKTTSDFLEWNKMQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLNEEHFIITERKTKKIRKVTINP
ELQIILKRLFVQLEAKETDLMFANRSGDKPFSTQYVNSKLKDIFTKYNVKGQYSSHFMRKTLGRRVWEVNKYSDQALLLL
SQLFNHTSVSTTKIYLGIREQEISNLYLSI

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22438; Mature: 22307

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKGQKTTSDFLEWNKMQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLN
CCCCCCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEEEECCEEEHHHHHHHHHHHHHHCC
EEHFIITERKTKKIRKVTINPELQIILKRLFVQLEAKETDLMFANRSGDKPFSTQYVNSK
CCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHH
LKDIFTKYNVKGQYSSHFMRKTLGRRVWEVNKYSDQALLLLSQLFNHTSVSTTKIYLGIR
HHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEC
EQEISNLYLSI
HHHHCEEEEEC
>Mature Secondary Structure 
ALKGQKTTSDFLEWNKMQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLN
CCCCCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEEEECCEEEHHHHHHHHHHHHHHCC
EEHFIITERKTKKIRKVTINPELQIILKRLFVQLEAKETDLMFANRSGDKPFSTQYVNSK
CCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHH
LKDIFTKYNVKGQYSSHFMRKTLGRRVWEVNKYSDQALLLLSQLFNHTSVSTTKIYLGIR
HHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEC
EQEISNLYLSI
HHHHCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA