| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300423
Identifier: 146300423
GI number: 146300423
Start: 3182734
End: 3183297
Strand: Direct
Name: 146300423
Synonym: Fjoh_2672
Alternate gene names: NA
Gene position: 3182734-3183297 (Clockwise)
Preceding gene: 146300422
Following gene: 146300424
Centisome position: 52.2
GC content: 39.89
Gene sequence:
>564_bases ATGCAAAACTTAGAATCGCTGTTCCAGTCCTTTGAAACTGGCATTCGAAGCGTGAAAGCTACAAAGCCGAAAGAATATCT GAATAAGATAGGATTGGATTATGCGGAACTGAGAATCGGCTTTAATTCAGGACAGTTTCATCACAATAAAAGCCAAGAAG CCAAAGATGAATTTGAAGCTTTAGGAATGCTTAAAAAGAGCGATGCGGGTGTGAGAAAAGAAGACCTGACAGCCTATACC GTTTTTGGAAGGTACGGACTAATTTTTCCACTGCTAAGCAAAGAGAACCAAATTGTAAACTATTTCGCTTTACGGTTTGA TTTGGAGAGTCCTAAAGAAGAATACCTCAACAGTGAAGGCATTTATCCATCTTATCCAAATCTGCTCACTAAAAGGCTCT ATATTGTTCCGACAGTCATTGACTGCGCAAGCTTTTTGCAGTCCAAAGCACTGGAGAACAGAGATGCTGTGATTGCAATG CACAGCGGAACGTTATTGCCCCAGCACTTAGAAGCTATTAAAAGCCTTCACGAATTGGAAGAAATAATAATCATTAAACG CTAA
Upstream 100 bases:
>100_bases AATCAAATTTATATTTCATATTACAAATTCGGTGCAATATCCGAAGCAGTATTCTTGTGCCCAAAAATTACGTGTTTAAC TCTAAAAAAAATTAAAGCTT
Downstream 100 bases:
>100_bases CACTATGCAAGATATAAGAACGCAAATACAGAATATCAGACCAGAACTGCCAGTAAATATGATTCAGCTCCCAGACGGAC ACAGCATGAATGATATGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQNLESLFQSFETGIRSVKATKPKEYLNKIGLDYAELRIGFNSGQFHHNKSQEAKDEFEALGMLKKSDAGVRKEDLTAYT VFGRYGLIFPLLSKENQIVNYFALRFDLESPKEEYLNSEGIYPSYPNLLTKRLYIVPTVIDCASFLQSKALENRDAVIAM HSGTLLPQHLEAIKSLHELEEIIIIKR
Sequences:
>Translated_187_residues MQNLESLFQSFETGIRSVKATKPKEYLNKIGLDYAELRIGFNSGQFHHNKSQEAKDEFEALGMLKKSDAGVRKEDLTAYT VFGRYGLIFPLLSKENQIVNYFALRFDLESPKEEYLNSEGIYPSYPNLLTKRLYIVPTVIDCASFLQSKALENRDAVIAM HSGTLLPQHLEAIKSLHELEEIIIIKR >Mature_187_residues MQNLESLFQSFETGIRSVKATKPKEYLNKIGLDYAELRIGFNSGQFHHNKSQEAKDEFEALGMLKKSDAGVRKEDLTAYT VFGRYGLIFPLLSKENQIVNYFALRFDLESPKEEYLNSEGIYPSYPNLLTKRLYIVPTVIDCASFLQSKALENRDAVIAM HSGTLLPQHLEAIKSLHELEEIIIIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21391; Mature: 21391
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNLESLFQSFETGIRSVKATKPKEYLNKIGLDYAELRIGFNSGQFHHNKSQEAKDEFEA CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCHHHHHHHHH LGMLKKSDAGVRKEDLTAYTVFGRYGLIFPLLSKENQIVNYFALRFDLESPKEEYLNSEG HHHHHCCCCCCCHHHCCEEEEHHHHHHHHHHHCCCCHHEEHHEEEECCCCCHHHHCCCCC IYPSYPNLLTKRLYIVPTVIDCASFLQSKALENRDAVIAMHSGTLLPQHLEAIKSLHELE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH EIIIIKR HHHHCCC >Mature Secondary Structure MQNLESLFQSFETGIRSVKATKPKEYLNKIGLDYAELRIGFNSGQFHHNKSQEAKDEFEA CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCHHHHHHHHH LGMLKKSDAGVRKEDLTAYTVFGRYGLIFPLLSKENQIVNYFALRFDLESPKEEYLNSEG HHHHHCCCCCCCHHHCCEEEEHHHHHHHHHHHCCCCHHEEHHEEEECCCCCHHHHCCCCC IYPSYPNLLTKRLYIVPTVIDCASFLQSKALENRDAVIAMHSGTLLPQHLEAIKSLHELE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH EIIIIKR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA