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The map label for this gene is insF1 [H]

Identifier: 146300392

GI number: 146300392

Start: 3135092

End: 3136204

Strand: Reverse

Name: insF1 [H]

Synonym: Fjoh_2637

Alternate gene names: 146300392

Gene position: 3136204-3135092 (Counterclockwise)

Preceding gene: 146300394

Following gene: 146300391

Centisome position: 51.44

GC content: 36.21

Gene sequence:

>1113_bases
ATGGAGAAGTATAAAATTTATGACCGTGATTTCAGAGTGAATGCTGTCAAACTGGGACTTGAAACAAATTTTTTTAAAGC
GGCAAAACAACTTGGCGTACCTACAACGAATATTTACAGATGGCGGAATGAACTTAGCAAAGACGGATCAAAAAGCTTTT
GCGGCAGAACTCCTGAACAAAAACGGATTGCAGAACTTAAGCTCGCACTGAGAAGAAAACTAAAAAAGGTTGAAATTCAA
ATTGAAATATTACAAAGCGCAGGCAGATATATCCATCAAGGCAAGCCGCATATTTTTCACTTTATTGAAAATAATCTAGA
TAAATATTCACTTTGGAGAATGTGTCAAGTTTTAGGTATAATGCCGGCTACTTATATTAACTGGAAAAACAAAATACTTT
CTCCCAGAAAACGTAAGACAATTTTATTAGAGAAAGAAATAACTTCTATATTCTATGAATACAAAGAGATGTACGGTAAT
GCAAAAATTGCAGCAGAATTACAAAGCCGGGGCATTCAATTAAAATTGTGCGCAGTATCCTGGTATATGAAAAGACTGGG
CCTTGTCAGTAAGCACAGCACAAAGAACAAGGTCAAATCCGGTATACGATTTAATGCTCATAATCCTTGTATTTTTCCTA
ACGTTTTAAATAGACAGTTTAAAGCCGACAAACCTTCTCTGATCTGGGTAACGGGCATAGCGAGTCTGGAAACAGCCCAG
GGGCTGCTGTACCTGACAATTATCATAGACTTATTCGACAGAAAAATTATCGGATGGAATCTAAGCGAACATTTGACAAT
AAGAGAAACCTCCATGCCTGCCTGGGAAATGGCTGTTCAAAACCGCGGAACAAAAAAAGGGCTTATATTTCATTCTGACA
GATCATCTCAATACGCCAATAAAATTTTCACTCGTAAATTAAACTCTTATGAGCATATTATAAGAAGTATGGCCCGGGCA
GGAAATCATTTAGACAATGCTGTCCCTAGGAGCTTTTTTATTTCCATTAAATCGGAACTTGTTAATTTAAACAGTCTTCC
AACAAAAAAGGATATGGAAGACAAAGTAGCTCACTATATTGAAAATCTCAATTCAAAAGTCGTAACGTTATAA

Upstream 100 bases:

>100_bases
TAATGATATATCTAAGCATGTTATTATCTTCTATTATTTCTATATCTAAATCATTATTATTTCTTAAATTCACGTGATCA
CAGTATCAAAACTTCAAGAG

Downstream 100 bases:

>100_bases
ATTATAAAACTTTAAGCTGTGAAAAGAAAATATGAAGACCATTTTAAAGAGCAGGCCGTCAGGTTAAGTTTTGAGCGGGG
GGAGATCAGCAGTGTCGAGA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MEKYKIYDRDFRVNAVKLGLETNFFKAAKQLGVPTTNIYRWRNELSKDGSKSFCGRTPEQKRIAELKLALRRKLKKVEIQ
IEILQSAGRYIHQGKPHIFHFIENNLDKYSLWRMCQVLGIMPATYINWKNKILSPRKRKTILLEKEITSIFYEYKEMYGN
AKIAAELQSRGIQLKLCAVSWYMKRLGLVSKHSTKNKVKSGIRFNAHNPCIFPNVLNRQFKADKPSLIWVTGIASLETAQ
GLLYLTIIIDLFDRKIIGWNLSEHLTIRETSMPAWEMAVQNRGTKKGLIFHSDRSSQYANKIFTRKLNSYEHIIRSMARA
GNHLDNAVPRSFFISIKSELVNLNSLPTKKDMEDKVAHYIENLNSKVVTL

Sequences:

>Translated_370_residues
MEKYKIYDRDFRVNAVKLGLETNFFKAAKQLGVPTTNIYRWRNELSKDGSKSFCGRTPEQKRIAELKLALRRKLKKVEIQ
IEILQSAGRYIHQGKPHIFHFIENNLDKYSLWRMCQVLGIMPATYINWKNKILSPRKRKTILLEKEITSIFYEYKEMYGN
AKIAAELQSRGIQLKLCAVSWYMKRLGLVSKHSTKNKVKSGIRFNAHNPCIFPNVLNRQFKADKPSLIWVTGIASLETAQ
GLLYLTIIIDLFDRKIIGWNLSEHLTIRETSMPAWEMAVQNRGTKKGLIFHSDRSSQYANKIFTRKLNSYEHIIRSMARA
GNHLDNAVPRSFFISIKSELVNLNSLPTKKDMEDKVAHYIENLNSKVVTL
>Mature_370_residues
MEKYKIYDRDFRVNAVKLGLETNFFKAAKQLGVPTTNIYRWRNELSKDGSKSFCGRTPEQKRIAELKLALRRKLKKVEIQ
IEILQSAGRYIHQGKPHIFHFIENNLDKYSLWRMCQVLGIMPATYINWKNKILSPRKRKTILLEKEITSIFYEYKEMYGN
AKIAAELQSRGIQLKLCAVSWYMKRLGLVSKHSTKNKVKSGIRFNAHNPCIFPNVLNRQFKADKPSLIWVTGIASLETAQ
GLLYLTIIIDLFDRKIIGWNLSEHLTIRETSMPAWEMAVQNRGTKKGLIFHSDRSSQYANKIFTRKLNSYEHIIRSMARA
GNHLDNAVPRSFFISIKSELVNLNSLPTKKDMEDKVAHYIENLNSKVVTL

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=276, Percent_Identity=28.2608695652174, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1788405, Length=264, Percent_Identity=30.3030303030303, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787263, Length=264, Percent_Identity=30.3030303030303, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786753, Length=264, Percent_Identity=30.3030303030303, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786570, Length=264, Percent_Identity=30.3030303030303, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786490, Length=264, Percent_Identity=30.3030303030303, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789981, Length=229, Percent_Identity=32.3144104803493, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 42985; Mature: 42985

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYKIYDRDFRVNAVKLGLETNFFKAAKQLGVPTTNIYRWRNELSKDGSKSFCGRTPEQ
CCCCEEECCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCHH
KRIAELKLALRRKLKKVEIQIEILQSAGRYIHQGKPHIFHFIENNLDKYSLWRMCQVLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHHC
MPATYINWKNKILSPRKRKTILLEKEITSIFYEYKEMYGNAKIAAELQSRGIQLKLCAVS
CCHHHCCCHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEEEHHHH
WYMKRLGLVSKHSTKNKVKSGIRFNAHNPCIFPNVLNRQFKADKPSLIWVTGIASLETAQ
HHHHHHCHHHCCCHHHHHHCCCEECCCCCEECHHHHHHHCCCCCCCEEEEECCCHHHHHC
GLLYLTIIIDLFDRKIIGWNLSEHLTIRETSMPAWEMAVQNRGTKKGLIFHSDRSSQYAN
CHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEECCCCHHHHH
KIFTRKLNSYEHIIRSMARAGNHLDNAVPRSFFISIKSELVNLNSLPTKKDMEDKVAHYI
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ENLNSKVVTL
HCCCCCEECC
>Mature Secondary Structure
MEKYKIYDRDFRVNAVKLGLETNFFKAAKQLGVPTTNIYRWRNELSKDGSKSFCGRTPEQ
CCCCEEECCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCHH
KRIAELKLALRRKLKKVEIQIEILQSAGRYIHQGKPHIFHFIENNLDKYSLWRMCQVLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHHC
MPATYINWKNKILSPRKRKTILLEKEITSIFYEYKEMYGNAKIAAELQSRGIQLKLCAVS
CCHHHCCCHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEEEHHHH
WYMKRLGLVSKHSTKNKVKSGIRFNAHNPCIFPNVLNRQFKADKPSLIWVTGIASLETAQ
HHHHHHCHHHCCCHHHHHHCCCEECCCCCEECHHHHHHHCCCCCCCEEEEECCCHHHHHC
GLLYLTIIIDLFDRKIIGWNLSEHLTIRETSMPAWEMAVQNRGTKKGLIFHSDRSSQYAN
CHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEECCCCHHHHH
KIFTRKLNSYEHIIRSMARAGNHLDNAVPRSFFISIKSELVNLNSLPTKKDMEDKVAHYI
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ENLNSKVVTL
HCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]