Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300394

Identifier: 146300394

GI number: 146300394

Start: 3139565

End: 3142030

Strand: Reverse

Name: 146300394

Synonym: Fjoh_2639

Alternate gene names: NA

Gene position: 3142030-3139565 (Counterclockwise)

Preceding gene: 146300395

Following gene: 146300392

Centisome position: 51.54

GC content: 34.39

Gene sequence:

>2466_bases
ATGGAACAGTTCCCTCATCTAAATTTCATCCAAAAGGTTTCTGGCAAACCTCGTCTGTTTGGAGGCGGCAAGCCAAATGC
TACAACTGAAGAAAATAAAGCAAACAGACAAGGACATCGAGATTCTCTTTTTTCTAAAACTTCAAATGTAAGATCAAATT
GGGAAGACTTATTTAAGATGCGAGATTCAATGGAACTTGCAAACTTAGATAAAGACATTGTTCCAGTACTTATCCAGCTT
AATCCTAGCTTATTAAATAATCCTGAGTTTGATTTACATGAGTTTGGAATTGAGATAATTTCAGAAGAAGAAGAGGGATT
CATTGTAGGCGCATCTTTTGATAGCTTAAGGGCACTTGAACAGAAGATAATTGGATTTGCAAATTCTTCACATGGTACTG
CAAAAATAGCAGACTTGTGGAATATCATTGATGGAAATCGTGAAGAATGGAAACCAAAACATATATTGTCAGATAATTTA
TTTGAGAATTGGCACAATATTGACGACAATGACAACTACACAGTTGAAGTAGGAATTGCATTTGATTTTCCAGTTAAAAA
AGAACCAGACCGAGCAAAAAAAGGAGGAATTAAGCGTTTGGAGAAATACCAAGCATATATCATACATCGAGAGGAAAAGC
TTTTTGAAAGACAAGATCATTTTGAATCTTTCATCAACTCTTATGGAAGTTTAAATACTTCATATATTGAACTAGATGAC
AGCTTTAGTTGCGAAGTCACAATTAGTGGCAAGGGATTAAAAGATTTAGTCGTTAATTACCAATATGTTTTTGAAGTAAA
TGAAACTGAAACAATTCTTGGAGTACAAGGAAAAGATATAGATACAGACGCTATTCAAAGTGAGATATTAGCCCCAGAAA
AAGATTCTCCAATCATTGGAGTAATTGATAGCGGAATAATGGAAAATCATAAATACATTGAACTTGCAATTGATAGTAAA
AATTCTAAATGCTACGTCAATGGAGTAAGTTCTGCATCAGACCATGTTCAAGGAGGCGGACACGGAACTAAAGTTGCAGG
TGCTATACTTTATCCTAAAAACATTTCAGATATAGAATTTCCATATCAACTACCGTGTTTTATTCGAAATCTCAGAATAT
TATTTGACGACAATAAACTTCATCACAAGTATCCTGCCCAACTGATGAAGCAAATTGTAGAAGAAAACAAAGACTGCAAG
ATCTTTAATCTCTCCGTAAATTCCACAGTTCCTTTTAGAAAAAAACACATGTCAACATGGGCAGGAATTATCGACACACT
AACACATGATCAAGATGTTTTATTTATAATTTCAACTGGAAACTTAGAAAAATCGGACATAAGAAATTATATTAAAGAAG
GAAAGAACTATCCCGATTATCTATTCTCTCGCTTTTGCAATATTGCCAATCCAGCCCATAGTGCTTTTGGATTAACAGTA
GGATCTATTAATCATCATGCAGATTTTGAAGATGATACAAGAAAATCTCTTGGCGGTATAAACGATATTTCTGCATTTTC
GAGAATTGGAACAGGTATCTGGAATATTATTAAACCTGATGTTGTTGAATATGGAGGTGGGCTGACTGTTTCAAAAAATG
GACTAAGCCTTATTACGGGAACAGATGAAACACTTCCAGAACTTATAAGATCTACATTACATGGTGGTAGTGCGTATGGA
AAAGATGTCTCAGGCACATCATTTTCCGCCCCTAAAGTGACTCATATTGCCGCTCAACTACAAAAACTATATCCAGAAGA
AGGCAACAACCTAATTAGAGCCTTTATAGTTCAAGGAGCAAGATTACCTAATACTTATTTTCTAAATCCCACAACCGAAA
GTATTAAACTTTATGGTTATGGACTACCATCATTAGAGCGAGTAACTAAAAACACTGAAAGCAGAATAACTTTTTACAAT
ACTGGAAACCTAGCCACTGAGGAAGGACATATATATTCTCTAATAATTCCTAATGAGCTAAACAACCCTGCAAACGATTT
TGATGTTCTAATAGAGGTCACGTTAACATTTACTGCAAAAGTTCGAAGAACAAGACAAAAAATAAAATCTTATTTGTCAA
CATGGTTAGATTGGACATCCTCAAGATTAAACGAAAATCATAATCAATTTGTTAAAAGAAGTCTCGTTGATGAACCGACA
ATTCAAGATGAGGAAGAACATCAAGAGGGAGTAATCAACTGGAAAATTCGAGAGAGAAGCCATTGGGGAACAATTAAAGA
CATAAATAGAACAAACAATACCGTTCAAAAAGATTGGGTAATATTAAAAGCTTATGAACTTCCAGACGAGCTAAGTTTTG
CAGTTAGAGCACATAAAGGCTGGGATAGAACTGGATCAAATATACCTTATGCCTTCACCGTATCAATTGAAGTTTTGGGA
CAAAACATTCCGATCTATGAAAGTATTAGAATCGCAAATGAAATCGAAATTGAAACAGAAACTTAA

Upstream 100 bases:

>100_bases
ACGCGGCAAAAAAAGCAGTAATAAGTTCAAGTCTAGAAATTTCTATCGACGATCTGAATAGCGCCTTAGACGAAAACAAA
GCTATGAATAGATAACAAAA

Downstream 100 bases:

>100_bases
TTTAATTAATACAAAGTTACGTTCGTGTGTTGACACTTGAATTACAAGATTCTGAACGTCAGATAAAGCGACCTAACAAC
TGCAATTACACGTGACGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 821; Mature: 821

Protein sequence:

>821_residues
MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKMRDSMELANLDKDIVPVLIQL
NPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALEQKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNL
FENWHNIDDNDNYTVEVGIAFDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD
SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIGVIDSGIMENHKYIELAIDSK
NSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEFPYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCK
IFNLSVNSTVPFRKKHMSTWAGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV
GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITGTDETLPELIRSTLHGGSAYG
KDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGARLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYN
TGNLATEEGHIYSLIIPNELNNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT
IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKGWDRTGSNIPYAFTVSIEVLG
QNIPIYESIRIANEIEIETET

Sequences:

>Translated_821_residues
MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKMRDSMELANLDKDIVPVLIQL
NPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALEQKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNL
FENWHNIDDNDNYTVEVGIAFDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD
SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIGVIDSGIMENHKYIELAIDSK
NSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEFPYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCK
IFNLSVNSTVPFRKKHMSTWAGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV
GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITGTDETLPELIRSTLHGGSAYG
KDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGARLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYN
TGNLATEEGHIYSLIIPNELNNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT
IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKGWDRTGSNIPYAFTVSIEVLG
QNIPIYESIRIANEIEIETET
>Mature_821_residues
MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKMRDSMELANLDKDIVPVLIQL
NPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALEQKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNL
FENWHNIDDNDNYTVEVGIAFDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD
SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIGVIDSGIMENHKYIELAIDSK
NSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEFPYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCK
IFNLSVNSTVPFRKKHMSTWAGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV
GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITGTDETLPELIRSTLHGGSAYG
KDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGARLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYN
TGNLATEEGHIYSLIIPNELNNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT
IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKGWDRTGSNIPYAFTVSIEVLG
QNIPIYESIRIANEIEIETET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000209
- InterPro:   IPR015500 [H]

Pfam domain/function: PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 92929; Mature: 92929

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKM
CCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHH
RDSMELANLDKDIVPVLIQLNPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALE
HHHHHHHCCCCCCEEEEEEECHHHCCCCCCCHHHHCHHEECCCCCCEEEECCHHHHHHHH
QKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNLFENWHNIDDNDNYTVEVGIA
HHHHHCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEE
FDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD
EECCCCCCCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIG
CCEEEEEECCCCHHHHHEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCCCCEEE
VIDSGIMENHKYIELAIDSKNSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEF
EECCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHCCCCCCCCEEEEEEEECCCCCCCCC
PYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCKIFNLSVNSTVPFRKKHMSTW
CCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH
AGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV
HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHEEEE
GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITG
ECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCEEEEC
TDETLPELIRSTLHGGSAYGKDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGA
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHEEHHHHCCC
RLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYNTGNLATEEGHIYSLIIPNEL
CCCCEEEECCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCEEECCCCEEEEEECCCC
NNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT
CCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKG
CCCCHHHHCCCEEEEEECCCCCCCHHCCCCCCCCEECCEEEEEEECCCCHHHHHEEECCC
WDRTGSNIPYAFTVSIEVLGQNIPIYESIRIANEIEIETET
CCCCCCCCCEEEEEEEEEECCCCCCHHEEEECEEEEEEECC
>Mature Secondary Structure
MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKM
CCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHH
RDSMELANLDKDIVPVLIQLNPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALE
HHHHHHHCCCCCCEEEEEEECHHHCCCCCCCHHHHCHHEECCCCCCEEEECCHHHHHHHH
QKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNLFENWHNIDDNDNYTVEVGIA
HHHHHCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEE
FDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD
EECCCCCCCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIG
CCEEEEEECCCCHHHHHEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCCCCEEE
VIDSGIMENHKYIELAIDSKNSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEF
EECCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHCCCCCCCCEEEEEEEECCCCCCCCC
PYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCKIFNLSVNSTVPFRKKHMSTW
CCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH
AGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV
HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHEEEE
GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITG
ECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCEEEEC
TDETLPELIRSTLHGGSAYGKDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGA
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHEEHHHHCCC
RLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYNTGNLATEEGHIYSLIIPNEL
CCCCEEEECCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCEEECCCCEEEEEECCCC
NNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT
CCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKG
CCCCHHHHCCCEEEEEECCCCCCCHHCCCCCCCCEECCEEEEEEECCCCHHHHHEEECCC
WDRTGSNIPYAFTVSIEVLGQNIPIYESIRIANEIEIETET
CCCCCCCCCEEEEEEEEEECCCCCCHHEEEECEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]