| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300394
Identifier: 146300394
GI number: 146300394
Start: 3139565
End: 3142030
Strand: Reverse
Name: 146300394
Synonym: Fjoh_2639
Alternate gene names: NA
Gene position: 3142030-3139565 (Counterclockwise)
Preceding gene: 146300395
Following gene: 146300392
Centisome position: 51.54
GC content: 34.39
Gene sequence:
>2466_bases ATGGAACAGTTCCCTCATCTAAATTTCATCCAAAAGGTTTCTGGCAAACCTCGTCTGTTTGGAGGCGGCAAGCCAAATGC TACAACTGAAGAAAATAAAGCAAACAGACAAGGACATCGAGATTCTCTTTTTTCTAAAACTTCAAATGTAAGATCAAATT GGGAAGACTTATTTAAGATGCGAGATTCAATGGAACTTGCAAACTTAGATAAAGACATTGTTCCAGTACTTATCCAGCTT AATCCTAGCTTATTAAATAATCCTGAGTTTGATTTACATGAGTTTGGAATTGAGATAATTTCAGAAGAAGAAGAGGGATT CATTGTAGGCGCATCTTTTGATAGCTTAAGGGCACTTGAACAGAAGATAATTGGATTTGCAAATTCTTCACATGGTACTG CAAAAATAGCAGACTTGTGGAATATCATTGATGGAAATCGTGAAGAATGGAAACCAAAACATATATTGTCAGATAATTTA TTTGAGAATTGGCACAATATTGACGACAATGACAACTACACAGTTGAAGTAGGAATTGCATTTGATTTTCCAGTTAAAAA AGAACCAGACCGAGCAAAAAAAGGAGGAATTAAGCGTTTGGAGAAATACCAAGCATATATCATACATCGAGAGGAAAAGC TTTTTGAAAGACAAGATCATTTTGAATCTTTCATCAACTCTTATGGAAGTTTAAATACTTCATATATTGAACTAGATGAC AGCTTTAGTTGCGAAGTCACAATTAGTGGCAAGGGATTAAAAGATTTAGTCGTTAATTACCAATATGTTTTTGAAGTAAA TGAAACTGAAACAATTCTTGGAGTACAAGGAAAAGATATAGATACAGACGCTATTCAAAGTGAGATATTAGCCCCAGAAA AAGATTCTCCAATCATTGGAGTAATTGATAGCGGAATAATGGAAAATCATAAATACATTGAACTTGCAATTGATAGTAAA AATTCTAAATGCTACGTCAATGGAGTAAGTTCTGCATCAGACCATGTTCAAGGAGGCGGACACGGAACTAAAGTTGCAGG TGCTATACTTTATCCTAAAAACATTTCAGATATAGAATTTCCATATCAACTACCGTGTTTTATTCGAAATCTCAGAATAT TATTTGACGACAATAAACTTCATCACAAGTATCCTGCCCAACTGATGAAGCAAATTGTAGAAGAAAACAAAGACTGCAAG ATCTTTAATCTCTCCGTAAATTCCACAGTTCCTTTTAGAAAAAAACACATGTCAACATGGGCAGGAATTATCGACACACT AACACATGATCAAGATGTTTTATTTATAATTTCAACTGGAAACTTAGAAAAATCGGACATAAGAAATTATATTAAAGAAG GAAAGAACTATCCCGATTATCTATTCTCTCGCTTTTGCAATATTGCCAATCCAGCCCATAGTGCTTTTGGATTAACAGTA GGATCTATTAATCATCATGCAGATTTTGAAGATGATACAAGAAAATCTCTTGGCGGTATAAACGATATTTCTGCATTTTC GAGAATTGGAACAGGTATCTGGAATATTATTAAACCTGATGTTGTTGAATATGGAGGTGGGCTGACTGTTTCAAAAAATG GACTAAGCCTTATTACGGGAACAGATGAAACACTTCCAGAACTTATAAGATCTACATTACATGGTGGTAGTGCGTATGGA AAAGATGTCTCAGGCACATCATTTTCCGCCCCTAAAGTGACTCATATTGCCGCTCAACTACAAAAACTATATCCAGAAGA AGGCAACAACCTAATTAGAGCCTTTATAGTTCAAGGAGCAAGATTACCTAATACTTATTTTCTAAATCCCACAACCGAAA GTATTAAACTTTATGGTTATGGACTACCATCATTAGAGCGAGTAACTAAAAACACTGAAAGCAGAATAACTTTTTACAAT ACTGGAAACCTAGCCACTGAGGAAGGACATATATATTCTCTAATAATTCCTAATGAGCTAAACAACCCTGCAAACGATTT TGATGTTCTAATAGAGGTCACGTTAACATTTACTGCAAAAGTTCGAAGAACAAGACAAAAAATAAAATCTTATTTGTCAA CATGGTTAGATTGGACATCCTCAAGATTAAACGAAAATCATAATCAATTTGTTAAAAGAAGTCTCGTTGATGAACCGACA ATTCAAGATGAGGAAGAACATCAAGAGGGAGTAATCAACTGGAAAATTCGAGAGAGAAGCCATTGGGGAACAATTAAAGA CATAAATAGAACAAACAATACCGTTCAAAAAGATTGGGTAATATTAAAAGCTTATGAACTTCCAGACGAGCTAAGTTTTG CAGTTAGAGCACATAAAGGCTGGGATAGAACTGGATCAAATATACCTTATGCCTTCACCGTATCAATTGAAGTTTTGGGA CAAAACATTCCGATCTATGAAAGTATTAGAATCGCAAATGAAATCGAAATTGAAACAGAAACTTAA
Upstream 100 bases:
>100_bases ACGCGGCAAAAAAAGCAGTAATAAGTTCAAGTCTAGAAATTTCTATCGACGATCTGAATAGCGCCTTAGACGAAAACAAA GCTATGAATAGATAACAAAA
Downstream 100 bases:
>100_bases TTTAATTAATACAAAGTTACGTTCGTGTGTTGACACTTGAATTACAAGATTCTGAACGTCAGATAAAGCGACCTAACAAC TGCAATTACACGTGACGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 821; Mature: 821
Protein sequence:
>821_residues MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKMRDSMELANLDKDIVPVLIQL NPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALEQKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNL FENWHNIDDNDNYTVEVGIAFDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIGVIDSGIMENHKYIELAIDSK NSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEFPYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCK IFNLSVNSTVPFRKKHMSTWAGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITGTDETLPELIRSTLHGGSAYG KDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGARLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYN TGNLATEEGHIYSLIIPNELNNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKGWDRTGSNIPYAFTVSIEVLG QNIPIYESIRIANEIEIETET
Sequences:
>Translated_821_residues MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKMRDSMELANLDKDIVPVLIQL NPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALEQKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNL FENWHNIDDNDNYTVEVGIAFDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIGVIDSGIMENHKYIELAIDSK NSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEFPYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCK IFNLSVNSTVPFRKKHMSTWAGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITGTDETLPELIRSTLHGGSAYG KDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGARLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYN TGNLATEEGHIYSLIIPNELNNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKGWDRTGSNIPYAFTVSIEVLG QNIPIYESIRIANEIEIETET >Mature_821_residues MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKMRDSMELANLDKDIVPVLIQL NPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALEQKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNL FENWHNIDDNDNYTVEVGIAFDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIGVIDSGIMENHKYIELAIDSK NSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEFPYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCK IFNLSVNSTVPFRKKHMSTWAGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITGTDETLPELIRSTLHGGSAYG KDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGARLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYN TGNLATEEGHIYSLIIPNELNNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKGWDRTGSNIPYAFTVSIEVLG QNIPIYESIRIANEIEIETET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 92929; Mature: 92929
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKM CCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHH RDSMELANLDKDIVPVLIQLNPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALE HHHHHHHCCCCCCEEEEEEECHHHCCCCCCCHHHHCHHEECCCCCCEEEECCHHHHHHHH QKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNLFENWHNIDDNDNYTVEVGIA HHHHHCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEE FDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD EECCCCCCCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECC SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIG CCEEEEEECCCCHHHHHEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCCCCEEE VIDSGIMENHKYIELAIDSKNSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEF EECCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHCCCCCCCCEEEEEEEECCCCCCCCC PYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCKIFNLSVNSTVPFRKKHMSTW CCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH AGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHEEEE GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITG ECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCEEEEC TDETLPELIRSTLHGGSAYGKDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHEEHHHHCCC RLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYNTGNLATEEGHIYSLIIPNEL CCCCEEEECCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCEEECCCCEEEEEECCCC NNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT CCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKG CCCCHHHHCCCEEEEEECCCCCCCHHCCCCCCCCEECCEEEEEEECCCCHHHHHEEECCC WDRTGSNIPYAFTVSIEVLGQNIPIYESIRIANEIEIETET CCCCCCCCCEEEEEEEEEECCCCCCHHEEEECEEEEEEECC >Mature Secondary Structure MEQFPHLNFIQKVSGKPRLFGGGKPNATTEENKANRQGHRDSLFSKTSNVRSNWEDLFKM CCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHH RDSMELANLDKDIVPVLIQLNPSLLNNPEFDLHEFGIEIISEEEEGFIVGASFDSLRALE HHHHHHHCCCCCCEEEEEEECHHHCCCCCCCHHHHCHHEECCCCCCEEEECCHHHHHHHH QKIIGFANSSHGTAKIADLWNIIDGNREEWKPKHILSDNLFENWHNIDDNDNYTVEVGIA HHHHHCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEE FDFPVKKEPDRAKKGGIKRLEKYQAYIIHREEKLFERQDHFESFINSYGSLNTSYIELDD EECCCCCCCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECC SFSCEVTISGKGLKDLVVNYQYVFEVNETETILGVQGKDIDTDAIQSEILAPEKDSPIIG CCEEEEEECCCCHHHHHEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCCCCEEE VIDSGIMENHKYIELAIDSKNSKCYVNGVSSASDHVQGGGHGTKVAGAILYPKNISDIEF EECCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHCCCCCCCCEEEEEEEECCCCCCCCC PYQLPCFIRNLRILFDDNKLHHKYPAQLMKQIVEENKDCKIFNLSVNSTVPFRKKHMSTW CCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH AGIIDTLTHDQDVLFIISTGNLEKSDIRNYIKEGKNYPDYLFSRFCNIANPAHSAFGLTV HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHEEEE GSINHHADFEDDTRKSLGGINDISAFSRIGTGIWNIIKPDVVEYGGGLTVSKNGLSLITG ECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCEEEEC TDETLPELIRSTLHGGSAYGKDVSGTSFSAPKVTHIAAQLQKLYPEEGNNLIRAFIVQGA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHEEHHHHCCC RLPNTYFLNPTTESIKLYGYGLPSLERVTKNTESRITFYNTGNLATEEGHIYSLIIPNEL CCCCEEEECCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCEEECCCCEEEEEECCCC NNPANDFDVLIEVTLTFTAKVRRTRQKIKSYLSTWLDWTSSRLNENHNQFVKRSLVDEPT CCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC IQDEEEHQEGVINWKIRERSHWGTIKDINRTNNTVQKDWVILKAYELPDELSFAVRAHKG CCCCHHHHCCCEEEEEECCCCCCCHHCCCCCCCCEECCEEEEEEECCCCHHHHHEEECCC WDRTGSNIPYAFTVSIEVLGQNIPIYESIRIANEIEIETET CCCCCCCCCEEEEEEEEEECCCCCCHHEEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]