| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300380
Identifier: 146300380
GI number: 146300380
Start: 3120599
End: 3120988
Strand: Reverse
Name: 146300380
Synonym: Fjoh_2625
Alternate gene names: NA
Gene position: 3120988-3120599 (Counterclockwise)
Preceding gene: 146300381
Following gene: 146300379
Centisome position: 51.19
GC content: 33.08
Gene sequence:
>390_bases ATGTTTACAATCGACCAAATCAAAGAAGCACATTCTAAAGTAAAAAGCGGTGCTGATTTTCCAAATTATATACAAGATTT AATTATTCTGGGTGTAAAAGGTTATGACACTTTTGTGAATGACGGACACGTTGAATACTATGGTGTAAATGGCTATATCG TTACATCTGACGAAAAATATAATCTTATTTCAGTTGCGGCAACGGTCAATAAAGAGCTTTTTATTGAATTTCTTGTAAAA CATCAGCAGGGTGAAACAGATTACTTAACTTTCTGTAATCATGCAGGACAATGCGGTATTGCAAAATGGAGAGTTGATAT TATCGAAATGACCTGCACGTATTTTGACAGTGCTGAAAATGAAATTTTAATCGAGAAAATTCCAGAATAA
Upstream 100 bases:
>100_bases ATTTATAAAACCATTAATCGTATTTTTGAAACAATAATTTTTTTTCAATGCAAGGCAATTGCGCTGGAAACCTATATAAC TAATCTAAAATTAAAATAAT
Downstream 100 bases:
>100_bases ATTCTAAAATGACAAATTTTAATTCAATTTATTCAACAGCTAAAAAAGGTATCTTTTTGATGCTTTTTTTAGTTTGTTTT ACAGGATTTTCTCAGCATAA
Product: Phage envelope protein-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKYNLISVAATVNKELFIEFLVK HQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAENEILIEKIPE
Sequences:
>Translated_129_residues MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKYNLISVAATVNKELFIEFLVK HQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAENEILIEKIPE >Mature_129_residues MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKYNLISVAATVNKELFIEFLVK HQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAENEILIEKIPE
Specific function: Unknown
COG id: COG5562
COG function: function code R; Phage envelope protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14683; Mature: 14683
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKY CCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCCCEEEEECCCEEEECCCCC NLISVAATVNKELFIEFLVKHQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAEN EEEEEEEHHCHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEHHHHEEEEEEEHHCCCCCC EILIEKIPE EEEEEECCC >Mature Secondary Structure MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKY CCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCCCEEEEECCCEEEECCCCC NLISVAATVNKELFIEFLVKHQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAEN EEEEEEEHHCHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEHHHHEEEEEEEHHCCCCCC EILIEKIPE EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA