Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300379

Identifier: 146300379

GI number: 146300379

Start: 3119733

End: 3120539

Strand: Reverse

Name: 146300379

Synonym: Fjoh_2624

Alternate gene names: NA

Gene position: 3120539-3119733 (Counterclockwise)

Preceding gene: 146300380

Following gene: 146300378

Centisome position: 51.18

GC content: 34.7

Gene sequence:

>807_bases
ATGCTTTTTTTAGTTTGTTTTACAGGATTTTCTCAGCATAAAAAAGAAAAAACGAAGTTTAAGGTTATTGCTTTTTATAC
TGCCAAAAACGATCAGGCGCATATAAGTTTTGTGCATGAAGCCAATAAATGGTTTCCAAAAATTGCTCAGGAAAATCATT
TTGTTTACGATTCTACAAGCAATTGGAATAATTTAAATGCAAATTTTTTAGCCGATTATCAGGTTGTTCTATTTTTAGAT
ACAAGACCTGAAGCTCCAGAACAGCGTGAAGCTTTTCGAAAATACATGGAAAATGGCGGCGGTTTTATCGGATTCCATTT
TTCTGCCTTTGCTTTAAAAGATTCAAGTTATCCGCAAAATTGGGATTGGTATCACAATACATTTTTGGGTTCCGGCGAAT
ACGGAAGTAATACCTGGAAACCAACATCGGCGGTTTTAAGAGTCGAAAACCAGCATCCGGCAACTAAAAACCTTCCTAAA
ACTTTTACTTCGGCACCAAACGAATGGTACAGATGGAGCAATGATTTAACCAAAAATCCAGATATAAAAATTCTTTTGGC
AATAGACGAAAGCAGTTTCCCTTTAGGAACCGGGCCAAAAGCACACGAAATCTGGCACAGCGGTTATTATCCTGTAGTCT
GGACCAATACAAAATATAAAATGTTCTATGTAAATATGGGGCATAATGATATTGATTACGAAGGCAAAACCAATAAAACA
CTTTCCTACACTTTTGATAATAAAACACAAAACCAATTAATTCTTAATGAATTGCTTTGGCTGGGGAATTCTAAAAAAAT
TAAATAA

Upstream 100 bases:

>100_bases
GTGCTGAAAATGAAATTTTAATCGAGAAAATTCCAGAATAAATTCTAAAATGACAAATTTTAATTCAATTTATTCAACAG
CTAAAAAAGGTATCTTTTTG

Downstream 100 bases:

>100_bases
AATGGCTGTAAAACTTTCTTCTATCATCAATACAGACGAATTATTAAAATTAAATCCGTCAGAAATCATTTTAATCGATG
CCAGAGCAGGAATTAATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Crp/FNR Family Transcriptional Regulator; Cytochrome C Class I; YVTN Beta-Propeller Repeat-Containing Protein; PKD Domain Containing Protein; Glucose/Sorbosone Dehydrogenase; 40-Residue YVTN Beta-Propeller Repeat-Containing Protein; 40-Residue YVTN Beta-Propeller Repeat Protein; Glycoside Hydrolase Family; Endo-1 4-Beta-Xylanase A; Low Quality Protein; Sigma-70 Factor

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLFLVCFTGFSQHKKEKTKFKVIAFYTAKNDQAHISFVHEANKWFPKIAQENHFVYDSTSNWNNLNANFLADYQVVLFLD
TRPEAPEQREAFRKYMENGGGFIGFHFSAFALKDSSYPQNWDWYHNTFLGSGEYGSNTWKPTSAVLRVENQHPATKNLPK
TFTSAPNEWYRWSNDLTKNPDIKILLAIDESSFPLGTGPKAHEIWHSGYYPVVWTNTKYKMFYVNMGHNDIDYEGKTNKT
LSYTFDNKTQNQLILNELLWLGNSKKIK

Sequences:

>Translated_268_residues
MLFLVCFTGFSQHKKEKTKFKVIAFYTAKNDQAHISFVHEANKWFPKIAQENHFVYDSTSNWNNLNANFLADYQVVLFLD
TRPEAPEQREAFRKYMENGGGFIGFHFSAFALKDSSYPQNWDWYHNTFLGSGEYGSNTWKPTSAVLRVENQHPATKNLPK
TFTSAPNEWYRWSNDLTKNPDIKILLAIDESSFPLGTGPKAHEIWHSGYYPVVWTNTKYKMFYVNMGHNDIDYEGKTNKT
LSYTFDNKTQNQLILNELLWLGNSKKIK
>Mature_268_residues
MLFLVCFTGFSQHKKEKTKFKVIAFYTAKNDQAHISFVHEANKWFPKIAQENHFVYDSTSNWNNLNANFLADYQVVLFLD
TRPEAPEQREAFRKYMENGGGFIGFHFSAFALKDSSYPQNWDWYHNTFLGSGEYGSNTWKPTSAVLRVENQHPATKNLPK
TFTSAPNEWYRWSNDLTKNPDIKILLAIDESSFPLGTGPKAHEIWHSGYYPVVWTNTKYKMFYVNMGHNDIDYEGKTNKT
LSYTFDNKTQNQLILNELLWLGNSKKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31260; Mature: 31260

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLVCFTGFSQHKKEKTKFKVIAFYTAKNDQAHISFVHEANKWFPKIAQENHFVYDSTS
CEEEEEECCCCHHCCCCCEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCEEEECCC
NWNNLNANFLADYQVVLFLDTRPEAPEQREAFRKYMENGGGFIGFHFSAFALKDSSYPQN
CCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCC
WDWYHNTFLGSGEYGSNTWKPTSAVLRVENQHPATKNLPKTFTSAPNEWYRWSNDLTKNP
CCCHHCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCC
DIKILLAIDESSFPLGTGPKAHEIWHSGYYPVVWTNTKYKMFYVNMGHNDIDYEGKTNKT
CEEEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEECCEEEEEEEECCCCCCCCCCCCCCE
LSYTFDNKTQNQLILNELLWLGNSKKIK
EEEEECCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLFLVCFTGFSQHKKEKTKFKVIAFYTAKNDQAHISFVHEANKWFPKIAQENHFVYDSTS
CEEEEEECCCCHHCCCCCEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCEEEECCC
NWNNLNANFLADYQVVLFLDTRPEAPEQREAFRKYMENGGGFIGFHFSAFALKDSSYPQN
CCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCC
WDWYHNTFLGSGEYGSNTWKPTSAVLRVENQHPATKNLPKTFTSAPNEWYRWSNDLTKNP
CCCHHCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCC
DIKILLAIDESSFPLGTGPKAHEIWHSGYYPVVWTNTKYKMFYVNMGHNDIDYEGKTNKT
CEEEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEECCEEEEEEEECCCCCCCCCCCCCCE
LSYTFDNKTQNQLILNELLWLGNSKKIK
EEEEECCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA