| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300367
Identifier: 146300367
GI number: 146300367
Start: 3107586
End: 3109313
Strand: Reverse
Name: 146300367
Synonym: Fjoh_2612
Alternate gene names: NA
Gene position: 3109313-3107586 (Counterclockwise)
Preceding gene: 146300370
Following gene: 146300366
Centisome position: 51.0
GC content: 35.36
Gene sequence:
>1728_bases ATGAAACTTTTTACATTTCTTTTTTCACTTCTCACTATAACCATTACTGCACAAAACACTAAAAAATACGATACGTTTTT TGAGAAAGGAAACGGAAATCAATCTGCTTCGTATCAGGAAACAATTGCTTATTTTAAAATGCTTGCAGCTGATTTTCCAA CCATTCAAATGAAGGAAATGGGACTGACAGATTCTGGAGAACCTCTGCACATGATCACCTTTAATCCTGACAAGGAATTT GATTTTGATAAAATACAGAAAACAAAAGCCGTTTTATTCGTTAATAACGGAATCCACGCTGGAGAACCAGACGGAATTGA CGCAACAATGCAGTTTTACAGAGATTTGGCAACAGGAAAAATGAAAGCACCAAAAAATACCGTTTTGGTTACCATTCCAG TTTATAATATTGGCGGTGCTTTAAACCGAAATTCGACAACGCGTACCAACCAAGACGGGCCAGAGATTTATGGATTTAGA GGAAATGCCAGAAACTACGATTTGAACCGTGATTTAATGAAGTCAGATACCCGAAACACAAAAAGTTTTGTGGAGATTTT CCAGAAAATAAATGCCGATGTTTTTATCGACAATCACGTAAGCAACGGTTCTGATTATCAATACAAATTGACGTATATCA TGACACAGCATAATAAACTGGGAACGGTTTTGGGTGATTTTATGAACAACGAAATGATGCCGGCTTTGGTAAAAGATCTT CAGAAAAAGAAAATCGAAACTACGCCTTATGTCGATTCTTTTAAAGATACTCCAGACAAAGGTTTTGGGCAGTTTGTCGA TAGTCCGCGATATACAACGGGTTATACTTCGCTGTTTAATACAATTGGTTTTGTGGTAGAAACGCACATGCTGAAAAAAT ATGCCGAACGTGTAAAAATGACCTACGAATACATGAAATCGACTTTGGATTTTACCGATGCAAATTATCAAAAAATTAAA AATTTAAGAGTAAAAAATTTAGAGCAATATCAGCCAAAAAAATCATACACTTTAAAATGGGAATTAGACAGCACAAAAGC CACCACCTTTTCGTTTTTAGGATATGAAGCGGGTTACAAAAAAAGCGACGCTACAACAGGAAATCGTTTGTATTACGACC GCACAAAACCGTACAAAAAAGACGTTCCGTACATTAAAGAATTCAAATCAATTAAAGAAGTTGTGATTCCTACAGCTTAT ATTGTGCCGAGAGGATATTGGAATATTATTGATCTTTTGAAAAACAACAATATCTCGTTTAAACAAATTAAAAACGATAC AATTATAGAAGTCGAAAGCTACAGAATTGCCGATTTTAAAACGGTTCCCTCTGCTTACGAAGGGCATTATTTACACAGAA ACACAACCGTAACTTCTAAAATCGTTAAAATGGCTTTCGCCAAAGGTGATTACATCGTGCCAACGAACCAAAAAGGCGTA AAATATATCGTAGAAGCTTTTGAACCAGAAGGTGTTGATTCGTTTTTTAACTGGAATTTCTTCGACCCAATTTTACAGCA AAAAGAACATTATTCTGAATATATTTTTGAAGATACTGCCGGACAACTTTTAAAAGAAAATCCAGCTCTAAATGCAGAAT TAGAAACTAAAAAACAAAACGACCGCGAGTTTGCTAAAAACGCCGAAGCACAATTGGATTGGATTTACAAGCATTCTGCT TATTATGAAAAAGCGCATATGCAGTATCCTGTTTATAGGGTGCTTTAG
Upstream 100 bases:
>100_bases TTGCGCTCTTTGCGGTTAAAAAAACACGACGCACATCAAACTTGAAACCTGAAACTTGAAACAAAAAACTATATATTTGA TTTACTATAAAACCAAAACC
Downstream 100 bases:
>100_bases TTTTTTAACCGCAAAGCTTGTCATTTCGACGAAGGAGAAATCGCACTCGGAACTCTATAAAGATTGTCAATATTCTGTGT GGAATTACTAGTGTGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxypeptidase; M14 Family Peptidase; Peptidase Family M; Zinc Carboxypeptidase Family Protein; Zinc Carboxypeptidase; Zinc Carboxypeptidase Family; Secreted Protein
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MKLFTFLFSLLTITITAQNTKKYDTFFEKGNGNQSASYQETIAYFKMLAADFPTIQMKEMGLTDSGEPLHMITFNPDKEF DFDKIQKTKAVLFVNNGIHAGEPDGIDATMQFYRDLATGKMKAPKNTVLVTIPVYNIGGALNRNSTTRTNQDGPEIYGFR GNARNYDLNRDLMKSDTRNTKSFVEIFQKINADVFIDNHVSNGSDYQYKLTYIMTQHNKLGTVLGDFMNNEMMPALVKDL QKKKIETTPYVDSFKDTPDKGFGQFVDSPRYTTGYTSLFNTIGFVVETHMLKKYAERVKMTYEYMKSTLDFTDANYQKIK NLRVKNLEQYQPKKSYTLKWELDSTKATTFSFLGYEAGYKKSDATTGNRLYYDRTKPYKKDVPYIKEFKSIKEVVIPTAY IVPRGYWNIIDLLKNNNISFKQIKNDTIIEVESYRIADFKTVPSAYEGHYLHRNTTVTSKIVKMAFAKGDYIVPTNQKGV KYIVEAFEPEGVDSFFNWNFFDPILQQKEHYSEYIFEDTAGQLLKENPALNAELETKKQNDREFAKNAEAQLDWIYKHSA YYEKAHMQYPVYRVL
Sequences:
>Translated_575_residues MKLFTFLFSLLTITITAQNTKKYDTFFEKGNGNQSASYQETIAYFKMLAADFPTIQMKEMGLTDSGEPLHMITFNPDKEF DFDKIQKTKAVLFVNNGIHAGEPDGIDATMQFYRDLATGKMKAPKNTVLVTIPVYNIGGALNRNSTTRTNQDGPEIYGFR GNARNYDLNRDLMKSDTRNTKSFVEIFQKINADVFIDNHVSNGSDYQYKLTYIMTQHNKLGTVLGDFMNNEMMPALVKDL QKKKIETTPYVDSFKDTPDKGFGQFVDSPRYTTGYTSLFNTIGFVVETHMLKKYAERVKMTYEYMKSTLDFTDANYQKIK NLRVKNLEQYQPKKSYTLKWELDSTKATTFSFLGYEAGYKKSDATTGNRLYYDRTKPYKKDVPYIKEFKSIKEVVIPTAY IVPRGYWNIIDLLKNNNISFKQIKNDTIIEVESYRIADFKTVPSAYEGHYLHRNTTVTSKIVKMAFAKGDYIVPTNQKGV KYIVEAFEPEGVDSFFNWNFFDPILQQKEHYSEYIFEDTAGQLLKENPALNAELETKKQNDREFAKNAEAQLDWIYKHSA YYEKAHMQYPVYRVL >Mature_575_residues MKLFTFLFSLLTITITAQNTKKYDTFFEKGNGNQSASYQETIAYFKMLAADFPTIQMKEMGLTDSGEPLHMITFNPDKEF DFDKIQKTKAVLFVNNGIHAGEPDGIDATMQFYRDLATGKMKAPKNTVLVTIPVYNIGGALNRNSTTRTNQDGPEIYGFR GNARNYDLNRDLMKSDTRNTKSFVEIFQKINADVFIDNHVSNGSDYQYKLTYIMTQHNKLGTVLGDFMNNEMMPALVKDL QKKKIETTPYVDSFKDTPDKGFGQFVDSPRYTTGYTSLFNTIGFVVETHMLKKYAERVKMTYEYMKSTLDFTDANYQKIK NLRVKNLEQYQPKKSYTLKWELDSTKATTFSFLGYEAGYKKSDATTGNRLYYDRTKPYKKDVPYIKEFKSIKEVVIPTAY IVPRGYWNIIDLLKNNNISFKQIKNDTIIEVESYRIADFKTVPSAYEGHYLHRNTTVTSKIVKMAFAKGDYIVPTNQKGV KYIVEAFEPEGVDSFFNWNFFDPILQQKEHYSEYIFEDTAGQLLKENPALNAELETKKQNDREFAKNAEAQLDWIYKHSA YYEKAHMQYPVYRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66651; Mature: 66651
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFTFLFSLLTITITAQNTKKYDTFFEKGNGNQSASYQETIAYFKMLAADFPTIQMKEM CHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHC GLTDSGEPLHMITFNPDKEFDFDKIQKTKAVLFVNNGIHAGEPDGIDATMQFYRDLATGK CCCCCCCCEEEEEECCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC MKAPKNTVLVTIPVYNIGGALNRNSTTRTNQDGPEIYGFRGNARNYDLNRDLMKSDTRNT CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCH KSFVEIFQKINADVFIDNHVSNGSDYQYKLTYIMTQHNKLGTVLGDFMNNEMMPALVKDL HHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHH QKKKIETTPYVDSFKDTPDKGFGQFVDSPRYTTGYTSLFNTIGFVVETHMLKKYAERVKM HHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TYEYMKSTLDFTDANYQKIKNLRVKNLEQYQPKKSYTLKWELDSTKATTFSFLGYEAGYK HHHHHHHHCCCCCCCHHHHHHCHHHCHHHCCCCCCEEEEEEECCCCCCEEEEECCCCCCC KSDATTGNRLYYDRTKPYKKDVPYIKEFKSIKEVVIPTAYIVPRGYWNIIDLLKNNNISF CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCC KQIKNDTIIEVESYRIADFKTVPSAYEGHYLHRNTTVTSKIVKMAFAKGDYIVPTNQKGV EEECCCEEEEEECEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEECCCCCHH KYIVEAFEPEGVDSFFNWNFFDPILQQKEHYSEYIFEDTAGQLLKENPALNAELETKKQN HHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC DREFAKNAEAQLDWIYKHSAYYEKAHMQYPVYRVL HHHHHHCCCCCEEEEEHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MKLFTFLFSLLTITITAQNTKKYDTFFEKGNGNQSASYQETIAYFKMLAADFPTIQMKEM CHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHC GLTDSGEPLHMITFNPDKEFDFDKIQKTKAVLFVNNGIHAGEPDGIDATMQFYRDLATGK CCCCCCCCEEEEEECCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC MKAPKNTVLVTIPVYNIGGALNRNSTTRTNQDGPEIYGFRGNARNYDLNRDLMKSDTRNT CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCH KSFVEIFQKINADVFIDNHVSNGSDYQYKLTYIMTQHNKLGTVLGDFMNNEMMPALVKDL HHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHH QKKKIETTPYVDSFKDTPDKGFGQFVDSPRYTTGYTSLFNTIGFVVETHMLKKYAERVKM HHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TYEYMKSTLDFTDANYQKIKNLRVKNLEQYQPKKSYTLKWELDSTKATTFSFLGYEAGYK HHHHHHHHCCCCCCCHHHHHHCHHHCHHHCCCCCCEEEEEEECCCCCCEEEEECCCCCCC KSDATTGNRLYYDRTKPYKKDVPYIKEFKSIKEVVIPTAYIVPRGYWNIIDLLKNNNISF CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCC KQIKNDTIIEVESYRIADFKTVPSAYEGHYLHRNTTVTSKIVKMAFAKGDYIVPTNQKGV EEECCCEEEEEECEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEECCCCCHH KYIVEAFEPEGVDSFFNWNFFDPILQQKEHYSEYIFEDTAGQLLKENPALNAELETKKQN HHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC DREFAKNAEAQLDWIYKHSAYYEKAHMQYPVYRVL HHHHHHCCCCCEEEEEHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA