| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is phnA [C]
Identifier: 146300370
GI number: 146300370
Start: 3111735
End: 3112313
Strand: Reverse
Name: phnA [C]
Synonym: Fjoh_2615
Alternate gene names: 146300370
Gene position: 3112313-3111735 (Counterclockwise)
Preceding gene: 146300371
Following gene: 146300367
Centisome position: 51.05
GC content: 39.72
Gene sequence:
>579_bases ATGAGTATCGAAAGAGAATTAAGCAAACGAAGCGGATCTAAATGTGAGCTTTGCGGCGCTGAAGAAAATTTAAAAGTTTA TCAAGTACTTCCAACTAAAAAAGGAGGCATTGATGAAGCTGTATTTGCCTGTAACACCTGTATTGACCAAATTGAAAACC CTGACAATGTCGATTTAAATCACTGGAGATGTCTTAATGACAGTATGTGGAACGAAAATATTCCGGTTCAGGTTGCAGCC TGGAGAATGTTGAGCCGTTTACGTGCTGCAGGATGGCCTCAGGAATTGCTTGATATGATGTATTTAGACGAAGATACTCT TGAATGGGCAAAAGCAACCGGAGAAGGCGAAGATGACGAAAATAAACTGGTTCACCGCGACAGTAACGGCGTGGTTTTAC AACACGGAGATTCTGTAGTTTTAATTAAAGATCTAAAAGTAAAAGGATCAAGCATGGTTGCCAAACAAGGAACTGCTGTT CGTAATATTCGTTTAGACCACGAAAACGCTGAATACATCGAAGGAAAAGTTGATGGACAGCAGATTGTGATTATTACGCA GTATGTGAAAAAGATATAG
Upstream 100 bases:
>100_bases GCGAGACACCAAGCAATCGCATATACAACAATCAAAAGCATAAATTTGCCAGCGAAGCAAATTATAAGTAATTTCGCATT TTTAAAATAAACACCAAACA
Downstream 100 bases:
>100_bases TTTTTGAGAGACAAAGTAACAAAGGTTCAAAGTTTTAAATTGAAATTAAACCTCTGAACCTTTACCTAAAATAAAAAAAG CTGCTCAATATGAGCAGCTT
Product: PhnA protein-like protein
Products: NA
Alternate protein names: Alkylphosphonate Utilization Operon Protein PhnA; Alkylphosphonate Uptake Protein; PhnA Protein-Like Protein; PhnA Family Protein; Protein Involved In Phosphonate Metabolism; Phosphonoacetate Hydrolase; PhnA-Like Protein; Alkylphosphonate Utilization Operon Protein Phna; Alkylphosphonate Utilization Operon Protein; Phosphonoacetate Hydrolase PhnA; Phna Protein; Protein PhnA; Zn-Ribbon-Containing Protein; PhnA Zinc-Ribbon Family; Phosphonate Metabolism Zn-Ribbon-Containing Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSIERELSKRSGSKCELCGAEENLKVYQVLPTKKGGIDEAVFACNTCIDQIENPDNVDLNHWRCLNDSMWNENIPVQVAA WRMLSRLRAAGWPQELLDMMYLDEDTLEWAKATGEGEDDENKLVHRDSNGVVLQHGDSVVLIKDLKVKGSSMVAKQGTAV RNIRLDHENAEYIEGKVDGQQIVIITQYVKKI
Sequences:
>Translated_192_residues MSIERELSKRSGSKCELCGAEENLKVYQVLPTKKGGIDEAVFACNTCIDQIENPDNVDLNHWRCLNDSMWNENIPVQVAA WRMLSRLRAAGWPQELLDMMYLDEDTLEWAKATGEGEDDENKLVHRDSNGVVLQHGDSVVLIKDLKVKGSSMVAKQGTAV RNIRLDHENAEYIEGKVDGQQIVIITQYVKKI >Mature_191_residues SIERELSKRSGSKCELCGAEENLKVYQVLPTKKGGIDEAVFACNTCIDQIENPDNVDLNHWRCLNDSMWNENIPVQVAAW RMLSRLRAAGWPQELLDMMYLDEDTLEWAKATGEGEDDENKLVHRDSNGVVLQHGDSVVLIKDLKVKGSSMVAKQGTAVR NIRLDHENAEYIEGKVDGQQIVIITQYVKKI
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=94, Percent_Identity=45.7446808510638, Blast_Score=64, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21672; Mature: 21541
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIERELSKRSGSKCELCGAEENLKVYQVLPTKKGGIDEAVFACNTCIDQIENPDNVDLN CCCHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC HWRCLNDSMWNENIPVQVAAWRMLSRLRAAGWPQELLDMMYLDEDTLEWAKATGEGEDDE CEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC NKLVHRDSNGVVLQHGDSVVLIKDLKVKGSSMVAKQGTAVRNIRLDHENAEYIEGKVDGQ CCEEEECCCCEEEEECCCEEEEEECEECCCCEEHHCCCEEEEEEECCCCCCEEECCCCCC QIVIITQYVKKI EEEEEEHHHHCC >Mature Secondary Structure SIERELSKRSGSKCELCGAEENLKVYQVLPTKKGGIDEAVFACNTCIDQIENPDNVDLN CCHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC HWRCLNDSMWNENIPVQVAAWRMLSRLRAAGWPQELLDMMYLDEDTLEWAKATGEGEDDE CEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC NKLVHRDSNGVVLQHGDSVVLIKDLKVKGSSMVAKQGTAVRNIRLDHENAEYIEGKVDGQ CCEEEECCCCEEEEECCCEEEEEECEECCCCEEHHCCCEEEEEEECCCCCCEEECCCCCC QIVIITQYVKKI EEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA