| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is pyrE [H]
Identifier: 146300359
GI number: 146300359
Start: 3098808
End: 3099452
Strand: Reverse
Name: pyrE [H]
Synonym: Fjoh_2604
Alternate gene names: 146300359
Gene position: 3099452-3098808 (Counterclockwise)
Preceding gene: 146300366
Following gene: 146300358
Centisome position: 50.84
GC content: 38.14
Gene sequence:
>645_bases ATGATTTTTAATAAAGATACTGCCGAAAAAACAGCTGAATTGCTTTTGCAAATAAATGCAATTAAATTGAATCCAGAAAA TCCTTTTACATGGGCTTCTGGATGGAAATCTCCTATTTATTGTGATAATAGGTTAATTCTTTCATTTCCCAGCATTAGAA ACTACGTTCGCGACGAGTTTGCGAAGAACATCGAAAAACAATTTGGAAAGCCTGATGTCATTGCCGGTGTTGCCACTGGA GCCATTGGAGTTGGGATTTTGGTTGCCGAAAGCCTAGGACTTCCATTCGTATACGTACGTCCGGAACCAAAAAAACACGG AAGACAAAACCAAGTTGAAGGTTTTTTACAAAAAGGACAAAATGTTGTCGTGGTTGAAGATTTAATCAGCACCGGAAAAA GCAGTTTATTAGCTGTAGAAGCTTTAAGAAACGAAGGTGCCAACATTAAAGGAATGGCTGCCGTTTTTACTTATGGTTTT GGCGTTGCCGAAGAAAACTTCAAAGAAGCTAATGTTGATTTATTCACATTAAGCAACTACGAAAATCTATTAGATTTAGC CGTTCAAAAACAATACATCACAGAAGACCAGCAGTCTACATTACAAGAATGGAGCGTAAGCCCATCGACTTGGGGACAGG AATAA
Upstream 100 bases:
>100_bases AATACTCTCCAACAAGAACAATTGGAAATCTGTTTCTTTCGAGATTTCATTTGTCAAAAAAAGTGGTTTGTCGTTTACAA AAACTTTATACATTTGTACT
Downstream 100 bases:
>100_bases GATTTTAGATTTTAGATTGTTGATTGTTGATTGTTGATTTTCTAAAAATCGCTCTGCTCTTTTTGGATTTTGGAGTTTAT TTAAAGTTTCAACTTTGCGA
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MIFNKDTAEKTAELLLQINAIKLNPENPFTWASGWKSPIYCDNRLILSFPSIRNYVRDEFAKNIEKQFGKPDVIAGVATG AIGVGILVAESLGLPFVYVRPEPKKHGRQNQVEGFLQKGQNVVVVEDLISTGKSSLLAVEALRNEGANIKGMAAVFTYGF GVAEENFKEANVDLFTLSNYENLLDLAVQKQYITEDQQSTLQEWSVSPSTWGQE
Sequences:
>Translated_214_residues MIFNKDTAEKTAELLLQINAIKLNPENPFTWASGWKSPIYCDNRLILSFPSIRNYVRDEFAKNIEKQFGKPDVIAGVATG AIGVGILVAESLGLPFVYVRPEPKKHGRQNQVEGFLQKGQNVVVVEDLISTGKSSLLAVEALRNEGANIKGMAAVFTYGF GVAEENFKEANVDLFTLSNYENLLDLAVQKQYITEDQQSTLQEWSVSPSTWGQE >Mature_214_residues MIFNKDTAEKTAELLLQINAIKLNPENPFTWASGWKSPIYCDNRLILSFPSIRNYVRDEFAKNIEKQFGKPDVIAGVATG AIGVGILVAESLGLPFVYVRPEPKKHGRQNQVEGFLQKGQNVVVVEDLISTGKSSLLAVEALRNEGANIKGMAAVFTYGF GVAEENFKEANVDLFTLSNYENLLDLAVQKQYITEDQQSTLQEWSVSPSTWGQE
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=165, Percent_Identity=24.8484848484848, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17508631, Length=180, Percent_Identity=30, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI17933654, Length=143, Percent_Identity=31.4685314685315, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 23746; Mature: 23746
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNKDTAEKTAELLLQINAIKLNPENPFTWASGWKSPIYCDNRLILSFPSIRNYVRDEF CCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCEEECCEEEEECHHHHHHHHHHH AKNIEKQFGKPDVIAGVATGAIGVGILVAESLGLPFVYVRPEPKKHGRQNQVEGFLQKGQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCHHHHHHHHHCCC NVVVVEDLISTGKSSLLAVEALRNEGANIKGMAAVFTYGFGVAEENFKEANVDLFTLSNY CEEEEHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHCCEEEEEECCH ENLLDLAVQKQYITEDQQSTLQEWSVSPSTWGQE HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIFNKDTAEKTAELLLQINAIKLNPENPFTWASGWKSPIYCDNRLILSFPSIRNYVRDEF CCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCEEECCEEEEECHHHHHHHHHHH AKNIEKQFGKPDVIAGVATGAIGVGILVAESLGLPFVYVRPEPKKHGRQNQVEGFLQKGQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCHHHHHHHHHCCC NVVVVEDLISTGKSSLLAVEALRNEGANIKGMAAVFTYGFGVAEENFKEANVDLFTLSNY CEEEEHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHCCEEEEEECCH ENLLDLAVQKQYITEDQQSTLQEWSVSPSTWGQE HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA