| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300358
Identifier: 146300358
GI number: 146300358
Start: 3098240
End: 3098632
Strand: Reverse
Name: 146300358
Synonym: Fjoh_2603
Alternate gene names: NA
Gene position: 3098632-3098240 (Counterclockwise)
Preceding gene: 146300359
Following gene: 146300356
Centisome position: 50.82
GC content: 34.61
Gene sequence:
>393_bases ATGAACTTAGAAAGTCCAAAAGTTACTGTTCAGAAATCAGCACAGGATTTATTCGATCAATTGACTGATGTTAAGAATTT TGAAAAATTAATGCCGGATAACATTGCAAAATTTGAGGTTACTGGCGAAGACTCTTTTATTTTTGGATTGAAAGGCATGC CGGAAATCAAATTAAAAATGAAAGACAAAACAGCTCCAAACAAAATTGTTCTGGGCGCTGCAAGTGATAAACTTCCGTTT ACTTTAACATCAAACATCGACAGCGTTTCTGACTCAGAAAGTGCCGTACAATTGTTTTTCGAAGGCGAATTTAACGCTAT GATGGCAATGATGGTTAAAGGTCCAATTGGTAAGTTTATTGAAACTTTAGCAAACAATATGCACAAACTTTAA
Upstream 100 bases:
>100_bases TTTATTTAAAGTTTCAACTTTGCGAATTTTGCGCAATTATACATAACTTAGTAAAAAACCTTGCGCCCTTTGCGGTTAAA TAAAAATTAAAAAATATTAT
Downstream 100 bases:
>100_bases TAATGGTGAATTGTTAATTGTGAATTATAAATTGAAATGTCCGACTATTGTTGGACATTTTTTTTTACCGCAAAGTCCGC AAAGAGTTTTAGTCATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MNLESPKVTVQKSAQDLFDQLTDVKNFEKLMPDNIAKFEVTGEDSFIFGLKGMPEIKLKMKDKTAPNKIVLGAASDKLPF TLTSNIDSVSDSESAVQLFFEGEFNAMMAMMVKGPIGKFIETLANNMHKL
Sequences:
>Translated_130_residues MNLESPKVTVQKSAQDLFDQLTDVKNFEKLMPDNIAKFEVTGEDSFIFGLKGMPEIKLKMKDKTAPNKIVLGAASDKLPF TLTSNIDSVSDSESAVQLFFEGEFNAMMAMMVKGPIGKFIETLANNMHKL >Mature_130_residues MNLESPKVTVQKSAQDLFDQLTDVKNFEKLMPDNIAKFEVTGEDSFIFGLKGMPEIKLKMKDKTAPNKIVLGAASDKLPF TLTSNIDSVSDSESAVQLFFEGEFNAMMAMMVKGPIGKFIETLANNMHKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14410; Mature: 14410
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLESPKVTVQKSAQDLFDQLTDVKNFEKLMPDNIAKFEVTGEDSFIFGLKGMPEIKLKM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEEE KDKTAPNKIVLGAASDKLPFTLTSNIDSVSDSESAVQLFFEGEFNAMMAMMVKGPIGKFI CCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHH ETLANNMHKL HHHHHHHCCC >Mature Secondary Structure MNLESPKVTVQKSAQDLFDQLTDVKNFEKLMPDNIAKFEVTGEDSFIFGLKGMPEIKLKM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEEE KDKTAPNKIVLGAASDKLPFTLTSNIDSVSDSESAVQLFFEGEFNAMMAMMVKGPIGKFI CCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHH ETLANNMHKL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA