| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300342
Identifier: 146300342
GI number: 146300342
Start: 3080424
End: 3082403
Strand: Reverse
Name: 146300342
Synonym: Fjoh_2587
Alternate gene names: NA
Gene position: 3082403-3080424 (Counterclockwise)
Preceding gene: 146300343
Following gene: 146300341
Centisome position: 50.56
GC content: 31.57
Gene sequence:
>1980_bases ATGTTAGAAGAAAAGAATGATAACCTGCAAGAAGCAGACGGAAAATCAGGAATCGAAATAAGCGATTCTACGCAAAGTAA TGCAATTGAAAACTCAGATTCTGAAAAAGCTGAAGCAGCTGTTGAAAACACAGCAGCAGAAACCGTTGAAACAGAACAGC CAGATCATCAAAATGCATTAGATGCCATAACAAATTCAAATGCTGAAGAAAGCGAAGATGAGACACTAAAAGAACGTCAT GACATTCCTATGAAGGACTATCATACTTTTTCTTTAGATGCTCTTGTTGATGAACTTAAAAAGCTGATCAATATAGACAA AATTATGTCTGTAAAAGATCATATTGAAGAAATCAAAAAATCATTTTTACTACAATACAATCATTTTTTAGATGAAAAAA GAGATGAATTTAATGCATCTAAAGAAGATCCAAACGAAGAGTTTGAGTATCATTCTCCTTTAAAATCAAAATTTGATGAA TATTACAATGTTTTTAGAGAGAAAAGAAATGCACACTTTAAGCATTTACAAACCAATCTAAAATCAAATCTGGAAAACAG ACTTGCGATTGTTGAGGAACTAAAAGAACTTATAAATCCGCAGGAAAACATAAAAGATACTCTTAAACATTTTAACGATT TAAGAGAAAGATGGAAAAATGCAGGAGCAATTCCAAAAGACAAGTACAATCACGTTTGGAATAATTATCACTTTCATGTA GAAAATTTCTATGATTATCTGCATTTAGATCGTGAAGCCCGCGATTTAGATTTTAAACACAATCTTGATCAAAAACAAAA AATCATTGCAAGGGTTGAAGAACTTGTAAACGAAACTGATGTAAATAAAGCTTTCCGCGAATTACAAGATTTACACCGTT TATGGAAAGAGGACATTGGTCCGGTTTCAAAAGAACATCGTGATTCTATCTGGAATAAATTCAGCGAACTGACTAAAAAA ATCCACGATAAGAGAGAAGTTTTATTTGAAAGCCAAAGAGCTAACGAACAGCAAAATCTTGAGGCTAAAAAAGAAATCAT TGCTAAAATTGAGGTTTTAGGAACTGAAAAAGTGAATTCTCATTCTCAATGGCTGGTTCAGATTCAAAAAGTTGAAGCCT TAAGAAATGATTTTTTTGCAGCAGGAAAAGTTCCATCAGAAGTAAACGAAGAAACCTGGGCTGCCTTTAAAACTGCAGTT AGAAATTTCAACGCATTCAAAAACTCGTTTTATAAAGACATCAAAAAAGATCAAAACGATAATTTGAACAAGAAAATGGC TCTTGTTGCAAAAGCTAAAGAATTACAAGAAAGCACTGATTTTGGTTCTACTACTCCAGTAATGAAACAAATTCAGGAAG AATGGAAACAAATTGGACACGTTCCTAAGAAATATTCAGATAAAATCTGGAAAGAGTTTAAAGATGCATGCAATCATTAT TTTGATAAATTAAAAGAGCACAAATCAGAAGAAAACGCTGATGAGGTTGCCGCTTTTGATAATAAAAAAGCATATTTAGA GACTTTAAGAGCTTACCAGTTAACTGGAGATCATAAAACAGATCTTGATGCAATTAAACAGCATATTGAAATCTGGAAAG GTTATGGAAAAGTTCCTTTTTCCAGACGTCATATTGAAGGTAAATTCAATAAAATTTTAGATGCTCTTTTTGAAAAACTA AGTTTAAGCAAAAAAGAATCTGAAATGATGCGTTTTACAAACAGAATAGATTCTTTATCTGACAGTAACGATACACGCAA ATTAGATAATGAAAAAATCTTTATTATGCGTAAAATTGAAGAAGTACAGAATGAAATTTTCCAATTAGAAAATAACATTC AGTTCTTTACCAACACTAAAAATGCCAAAAAAGAGAATTCAATTGTTACAGAAGTACGCAAAAACATTGCTATTCACAAA GAAAGCCTTGAGGTTTGGAAAGACAAATTGAAACAATTACGAAACTTAGGTCAGGAGTAA
Upstream 100 bases:
>100_bases TTATCGTAAAATACTGCATAAACAAACGATTTATTTTGTAGTTAGAAACACCTTTACTATCTTTCGCACTGTTTAAAGTA AAAACCTTATACATTTAAAA
Downstream 100 bases:
>100_bases TTAAAATATAAGAACTGCAGTGAATTTTTCATTGCAGTTTTTTTATGTGTGCATTTTACCGCAAAGTTCGCAAAGCTTTT TATTAATTAGCTTTGCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MLEEKNDNLQEADGKSGIEISDSTQSNAIENSDSEKAEAAVENTAAETVETEQPDHQNALDAITNSNAEESEDETLKERH DIPMKDYHTFSLDALVDELKKLINIDKIMSVKDHIEEIKKSFLLQYNHFLDEKRDEFNASKEDPNEEFEYHSPLKSKFDE YYNVFREKRNAHFKHLQTNLKSNLENRLAIVEELKELINPQENIKDTLKHFNDLRERWKNAGAIPKDKYNHVWNNYHFHV ENFYDYLHLDREARDLDFKHNLDQKQKIIARVEELVNETDVNKAFRELQDLHRLWKEDIGPVSKEHRDSIWNKFSELTKK IHDKREVLFESQRANEQQNLEAKKEIIAKIEVLGTEKVNSHSQWLVQIQKVEALRNDFFAAGKVPSEVNEETWAAFKTAV RNFNAFKNSFYKDIKKDQNDNLNKKMALVAKAKELQESTDFGSTTPVMKQIQEEWKQIGHVPKKYSDKIWKEFKDACNHY FDKLKEHKSEENADEVAAFDNKKAYLETLRAYQLTGDHKTDLDAIKQHIEIWKGYGKVPFSRRHIEGKFNKILDALFEKL SLSKKESEMMRFTNRIDSLSDSNDTRKLDNEKIFIMRKIEEVQNEIFQLENNIQFFTNTKNAKKENSIVTEVRKNIAIHK ESLEVWKDKLKQLRNLGQE
Sequences:
>Translated_659_residues MLEEKNDNLQEADGKSGIEISDSTQSNAIENSDSEKAEAAVENTAAETVETEQPDHQNALDAITNSNAEESEDETLKERH DIPMKDYHTFSLDALVDELKKLINIDKIMSVKDHIEEIKKSFLLQYNHFLDEKRDEFNASKEDPNEEFEYHSPLKSKFDE YYNVFREKRNAHFKHLQTNLKSNLENRLAIVEELKELINPQENIKDTLKHFNDLRERWKNAGAIPKDKYNHVWNNYHFHV ENFYDYLHLDREARDLDFKHNLDQKQKIIARVEELVNETDVNKAFRELQDLHRLWKEDIGPVSKEHRDSIWNKFSELTKK IHDKREVLFESQRANEQQNLEAKKEIIAKIEVLGTEKVNSHSQWLVQIQKVEALRNDFFAAGKVPSEVNEETWAAFKTAV RNFNAFKNSFYKDIKKDQNDNLNKKMALVAKAKELQESTDFGSTTPVMKQIQEEWKQIGHVPKKYSDKIWKEFKDACNHY FDKLKEHKSEENADEVAAFDNKKAYLETLRAYQLTGDHKTDLDAIKQHIEIWKGYGKVPFSRRHIEGKFNKILDALFEKL SLSKKESEMMRFTNRIDSLSDSNDTRKLDNEKIFIMRKIEEVQNEIFQLENNIQFFTNTKNAKKENSIVTEVRKNIAIHK ESLEVWKDKLKQLRNLGQE >Mature_659_residues MLEEKNDNLQEADGKSGIEISDSTQSNAIENSDSEKAEAAVENTAAETVETEQPDHQNALDAITNSNAEESEDETLKERH DIPMKDYHTFSLDALVDELKKLINIDKIMSVKDHIEEIKKSFLLQYNHFLDEKRDEFNASKEDPNEEFEYHSPLKSKFDE YYNVFREKRNAHFKHLQTNLKSNLENRLAIVEELKELINPQENIKDTLKHFNDLRERWKNAGAIPKDKYNHVWNNYHFHV ENFYDYLHLDREARDLDFKHNLDQKQKIIARVEELVNETDVNKAFRELQDLHRLWKEDIGPVSKEHRDSIWNKFSELTKK IHDKREVLFESQRANEQQNLEAKKEIIAKIEVLGTEKVNSHSQWLVQIQKVEALRNDFFAAGKVPSEVNEETWAAFKTAV RNFNAFKNSFYKDIKKDQNDNLNKKMALVAKAKELQESTDFGSTTPVMKQIQEEWKQIGHVPKKYSDKIWKEFKDACNHY FDKLKEHKSEENADEVAAFDNKKAYLETLRAYQLTGDHKTDLDAIKQHIEIWKGYGKVPFSRRHIEGKFNKILDALFEKL SLSKKESEMMRFTNRIDSLSDSNDTRKLDNEKIFIMRKIEEVQNEIFQLENNIQFFTNTKNAKKENSIVTEVRKNIAIHK ESLEVWKDKLKQLRNLGQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77753; Mature: 77753
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEEKNDNLQEADGKSGIEISDSTQSNAIENSDSEKAEAAVENTAAETVETEQPDHQNAL CCCCCCCCCHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH DAITNSNAEESEDETLKERHDIPMKDYHTFSLDALVDELKKLINIDKIMSVKDHIEEIKK HHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFLLQYNHFLDEKRDEFNASKEDPNEEFEYHSPLKSKFDEYYNVFREKRNAHFKHLQTNL HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSNLENRLAIVEELKELINPQENIKDTLKHFNDLRERWKNAGAIPKDKYNHVWNNYHFHV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEH ENFYDYLHLDREARDLDFKHNLDQKQKIIARVEELVNETDVNKAFRELQDLHRLWKEDIG HHHHHHHHHCCHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVSKEHRDSIWNKFSELTKKIHDKREVLFESQRANEQQNLEAKKEIIAKIEVLGTEKVNS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHCCC HSQWLVQIQKVEALRNDFFAAGKVPSEVNEETWAAFKTAVRNFNAFKNSFYKDIKKDQND HHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NLNKKMALVAKAKELQESTDFGSTTPVMKQIQEEWKQIGHVPKKYSDKIWKEFKDACNHY CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FDKLKEHKSEENADEVAAFDNKKAYLETLRAYQLTGDHKTDLDAIKQHIEIWKGYGKVPF HHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC SRRHIEGKFNKILDALFEKLSLSKKESEMMRFTNRIDSLSDSNDTRKLDNEKIFIMRKIE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHH EVQNEIFQLENNIQFFTNTKNAKKENSIVTEVRKNIAIHKESLEVWKDKLKQLRNLGQE HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLEEKNDNLQEADGKSGIEISDSTQSNAIENSDSEKAEAAVENTAAETVETEQPDHQNAL CCCCCCCCCHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH DAITNSNAEESEDETLKERHDIPMKDYHTFSLDALVDELKKLINIDKIMSVKDHIEEIKK HHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFLLQYNHFLDEKRDEFNASKEDPNEEFEYHSPLKSKFDEYYNVFREKRNAHFKHLQTNL HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSNLENRLAIVEELKELINPQENIKDTLKHFNDLRERWKNAGAIPKDKYNHVWNNYHFHV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEH ENFYDYLHLDREARDLDFKHNLDQKQKIIARVEELVNETDVNKAFRELQDLHRLWKEDIG HHHHHHHHHCCHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVSKEHRDSIWNKFSELTKKIHDKREVLFESQRANEQQNLEAKKEIIAKIEVLGTEKVNS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHCCC HSQWLVQIQKVEALRNDFFAAGKVPSEVNEETWAAFKTAVRNFNAFKNSFYKDIKKDQND HHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NLNKKMALVAKAKELQESTDFGSTTPVMKQIQEEWKQIGHVPKKYSDKIWKEFKDACNHY CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FDKLKEHKSEENADEVAAFDNKKAYLETLRAYQLTGDHKTDLDAIKQHIEIWKGYGKVPF HHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC SRRHIEGKFNKILDALFEKLSLSKKESEMMRFTNRIDSLSDSNDTRKLDNEKIFIMRKIE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHH EVQNEIFQLENNIQFFTNTKNAKKENSIVTEVRKNIAIHKESLEVWKDKLKQLRNLGQE HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA