Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300343

Identifier: 146300343

GI number: 146300343

Start: 3082649

End: 3083395

Strand: Reverse

Name: 146300343

Synonym: Fjoh_2588

Alternate gene names: NA

Gene position: 3083395-3082649 (Counterclockwise)

Preceding gene: 146300344

Following gene: 146300342

Centisome position: 50.57

GC content: 32.66

Gene sequence:

>747_bases
ATGAAAATATCACAATTTTACTTCTGCATAATTTTTCTTTTTTCATCTGCTGTTAAAGCACAAGATACTATTCAATATAA
TAATCCATTTTCAGAAGCCAGATATCATTATTTTCTAAAAACTATTTTATTTTTTAATGAGTATTTAGATACTGAAAATG
GATCATACAATACTACTCAATTGCGTTTCCTTTATCCAATAGGAAATAAAGCCTGGAACCTTCGTTTTGATCTTCCTTTA
ATATCTGCAAATACTAATTCTGATAATAAAACCGGAATTGGCGACGTCAGCGCCGGGATAAGTTTTATACCGTATATGGA
AAGAAATAACGGCATTGCCTTAAGAGCAAGAGTTGTTTCAAATTCAGCCTCTGATCCCAGTTTTGGAAGCGGAAAATGGG
TTTTTATTCCCACCGTTTTTTATGGCCGTTATTTACAATCAAAAAGGTATTTATGGATTTCGTCTCTTGAGTACCAAACA
AGTTTTGCGGGTTCAAGCAGCCGAAATGATATAAATGTAACGGCATTTGAAAATGTTATTCTATGGTTTTTTGGAAGAAA
CTGGATTGCTGTCGATGCTGCATTTCGGTATAATAACACTGTAAAAGGATTTCAAAACAATGCATTTTTAGAATTTGGAA
GAAAAATTACTCCGGATAATTTAATTTACATTCATCCCAGCGTTGCATTTGGAGGCCAAAAAACATACAATTACGGATTA
GAGGCAGGAATTTTGATTTTATTCTAA

Upstream 100 bases:

>100_bases
CAGGCAGAGAAAGCCTGGAAGATCTGGAACAAATAAAAAAGCTGATTTTCAAGAAGTTAAAGTAATTTTCGTAATTTAGT
CTACTCATTTGTAGATAGTT

Downstream 100 bases:

>100_bases
GCAGAAAATCAGAAAAACGTTCAAAAAACATGATTTTATTTTAGTTAATTACTAAAAAATGTAATGATTTGAAATTTCTA
TTTCTTCTAAAAAAGGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQLRFLYPIGNKAWNLRFDLPL
ISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVSNSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQT
SFAGSSSRNDINVTAFENVILWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL
EAGILILF

Sequences:

>Translated_248_residues
MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQLRFLYPIGNKAWNLRFDLPL
ISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVSNSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQT
SFAGSSSRNDINVTAFENVILWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL
EAGILILF
>Mature_248_residues
MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQLRFLYPIGNKAWNLRFDLPL
ISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVSNSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQT
SFAGSSSRNDINVTAFENVILWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL
EAGILILF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28408; Mature: 28408

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQ
CCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LRFLYPIGNKAWNLRFDLPLISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVS
EEEEEECCCCEEEEEECCEEEECCCCCCCCCCCCCHHCCCEEEEEEECCCCEEEEEEEEC
NSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQTSFAGSSSRNDINVTAFENVI
CCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCEE
LWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL
EEEECCCEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCEEEECCCEEECCCEEECCCC
EAGILILF
CEEEEEEC
>Mature Secondary Structure
MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQ
CCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LRFLYPIGNKAWNLRFDLPLISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVS
EEEEEECCCCEEEEEECCEEEECCCCCCCCCCCCCHHCCCEEEEEEECCCCEEEEEEEEC
NSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQTSFAGSSSRNDINVTAFENVI
CCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCEE
LWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL
EEEECCCEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCEEEECCCEEECCCEEECCCC
EAGILILF
CEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA