| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300343
Identifier: 146300343
GI number: 146300343
Start: 3082649
End: 3083395
Strand: Reverse
Name: 146300343
Synonym: Fjoh_2588
Alternate gene names: NA
Gene position: 3083395-3082649 (Counterclockwise)
Preceding gene: 146300344
Following gene: 146300342
Centisome position: 50.57
GC content: 32.66
Gene sequence:
>747_bases ATGAAAATATCACAATTTTACTTCTGCATAATTTTTCTTTTTTCATCTGCTGTTAAAGCACAAGATACTATTCAATATAA TAATCCATTTTCAGAAGCCAGATATCATTATTTTCTAAAAACTATTTTATTTTTTAATGAGTATTTAGATACTGAAAATG GATCATACAATACTACTCAATTGCGTTTCCTTTATCCAATAGGAAATAAAGCCTGGAACCTTCGTTTTGATCTTCCTTTA ATATCTGCAAATACTAATTCTGATAATAAAACCGGAATTGGCGACGTCAGCGCCGGGATAAGTTTTATACCGTATATGGA AAGAAATAACGGCATTGCCTTAAGAGCAAGAGTTGTTTCAAATTCAGCCTCTGATCCCAGTTTTGGAAGCGGAAAATGGG TTTTTATTCCCACCGTTTTTTATGGCCGTTATTTACAATCAAAAAGGTATTTATGGATTTCGTCTCTTGAGTACCAAACA AGTTTTGCGGGTTCAAGCAGCCGAAATGATATAAATGTAACGGCATTTGAAAATGTTATTCTATGGTTTTTTGGAAGAAA CTGGATTGCTGTCGATGCTGCATTTCGGTATAATAACACTGTAAAAGGATTTCAAAACAATGCATTTTTAGAATTTGGAA GAAAAATTACTCCGGATAATTTAATTTACATTCATCCCAGCGTTGCATTTGGAGGCCAAAAAACATACAATTACGGATTA GAGGCAGGAATTTTGATTTTATTCTAA
Upstream 100 bases:
>100_bases CAGGCAGAGAAAGCCTGGAAGATCTGGAACAAATAAAAAAGCTGATTTTCAAGAAGTTAAAGTAATTTTCGTAATTTAGT CTACTCATTTGTAGATAGTT
Downstream 100 bases:
>100_bases GCAGAAAATCAGAAAAACGTTCAAAAAACATGATTTTATTTTAGTTAATTACTAAAAAATGTAATGATTTGAAATTTCTA TTTCTTCTAAAAAAGGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQLRFLYPIGNKAWNLRFDLPL ISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVSNSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQT SFAGSSSRNDINVTAFENVILWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL EAGILILF
Sequences:
>Translated_248_residues MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQLRFLYPIGNKAWNLRFDLPL ISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVSNSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQT SFAGSSSRNDINVTAFENVILWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL EAGILILF >Mature_248_residues MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQLRFLYPIGNKAWNLRFDLPL ISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVSNSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQT SFAGSSSRNDINVTAFENVILWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL EAGILILF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28408; Mature: 28408
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQ CCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LRFLYPIGNKAWNLRFDLPLISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVS EEEEEECCCCEEEEEECCEEEECCCCCCCCCCCCCHHCCCEEEEEEECCCCEEEEEEEEC NSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQTSFAGSSSRNDINVTAFENVI CCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCEE LWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL EEEECCCEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCEEEECCCEEECCCEEECCCC EAGILILF CEEEEEEC >Mature Secondary Structure MKISQFYFCIIFLFSSAVKAQDTIQYNNPFSEARYHYFLKTILFFNEYLDTENGSYNTTQ CCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LRFLYPIGNKAWNLRFDLPLISANTNSDNKTGIGDVSAGISFIPYMERNNGIALRARVVS EEEEEECCCCEEEEEECCEEEECCCCCCCCCCCCCHHCCCEEEEEEECCCCEEEEEEEEC NSASDPSFGSGKWVFIPTVFYGRYLQSKRYLWISSLEYQTSFAGSSSRNDINVTAFENVI CCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCEE LWFFGRNWIAVDAAFRYNNTVKGFQNNAFLEFGRKITPDNLIYIHPSVAFGGQKTYNYGL EEEECCCEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCEEEECCCEEECCCEEECCCC EAGILILF CEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA