| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is thrA [H]
Identifier: 146300330
GI number: 146300330
Start: 3061880
End: 3064327
Strand: Reverse
Name: thrA [H]
Synonym: Fjoh_2575
Alternate gene names: 146300330
Gene position: 3064327-3061880 (Counterclockwise)
Preceding gene: 146300336
Following gene: 146300329
Centisome position: 50.26
GC content: 36.07
Gene sequence:
>2448_bases ATGAAAGTATTAAAATTTGGCGGAACTTCTGTAGCCAATGCTCAAAATATAAAACTTGTTCTCGAAATTGTTAATAAAAA AGCTGCAAATGACAAACTTGTTGTTGTAGTTTCTGCACTGAGCAAAGTGACCGATTTACTTCAATCTGCAGCAGCAAAAG CAGCGGCAAACGATGAAAGCTTTAGAGAAGTTGTTGCCGAAATCGAGAAAAAACACCTTGATACTTTAAAAGAACTAATT CCTGTAAGTGAACAAAGCAGTCTTTTAAGCCATGTAAAAAGAATTATTAATCATTTAGAAACTTTATTAGACGGTTGTTT CTTATTAGGCGAATTGTCTCCAAGAACTGCCGATACTATTTTAAGTTTTGGAGAATTACTTTCATCATTCATCATTGCTC AGGCATTTCAGCAAACTGAAAAAGATGCCGTTTATAAAGACAGTCGTGAATTAATTAAAACTGATAATAATTTTGGAAAA GCAGCTGTTAATTTTGAAGTTTCAAATCAGCTGATTAAAGAATATTTTGCTGGAAATAAAGCAAAAATCAATATTCTTCC AGGATTTATTGCGCAGACTTTAGACGGAATTACTTCGACTTTAGGACGCGGCGGTTCTGATTATACTGCTGCAATTATAG CAGGAGCTTTAGATGCTGAACAATTGGAAATCTGGACTGACGTAAACGGAATGTTTACTGCAAACCCAAAAATCGTAAAA CAAGCACAGCCAATTGCAAACATTTCATATCAGGAAGCGATGGAATTGTCGCATTTTGGTGCCAAAGTTTTATATCCGCC AACAATTCAGCCGGTTTTAAGAAAAAACATTCCTATTTTAATCAAAAATACTTTTGAGCCGGAAGCTGTTGGAACTTTAA TTTCTGACACGGTTGTATCAAAAGATACCGTTGTAAAAGGAATAAGCCATATCGATAATATTTCACTTGTAACTCTTGAA GGTCCGGGAATGATTGGAGTTGCGGGTTCGTCAAGACGTTTGTTTGAAGTATTGTCTCAGGAAAAAATCAACGTGATTTT TATTACTCAGGCTTCTTCTGAGCATTCAATTTGTATCGGAATCCTGAATTCTGATGCTGATAAAGCCGAAGCTGCAATTA ACAGAGCTTTTGAAATCGAAATTTCGCAAAACAAAATCGATCCTTGTTATGTAGAAAAAGACCTTTGCATTATTGCTTTG GTGGGTGAAAACATGAAAAATCACCAGGGATTGAGCGGAAGAATGTTCAGTACTTTAGGAAAAAACAACGTAAATATTCG TGCAATCGCGCAAGGTGCTTCTGAAAGAAACATTTCGACTGTAATTAACGAAAGAGATGTTAAAAAAGCACTGAATACTT TACATGAAAACTTCTTTGAAGAAAACACAAAACAGCTCAACTTATTTGTAATGGGAGTTGGAAATGTGGGAGAAAAATTC ATCGAGCAGATTCACAGCCAAAAGAAATTCTTAAAAGATGTTTTAAAAATTAATGTTCGCGTAATTGCTTTATCAAACTC AAGAAAAATGATTTTTGATGAAGACGGAATATCTTTAAAAGACTGGCAGTCGACTTTGGAAAAAGGAGAAAATGCAGTTG CGGCAGAATTTATCGCCCGTGCAAAAGAACTCAATTTACGTAACAGTATTTTCGTAGACATTACAGCAAATGCAAGTGTA TCTGAAATGTACGAGAAATTTTTAAAAGAAAGTATTGCCGTTGTAACTTGTAATAAAATTGCTTGTTCATCTGCTTACGA CAATTATAAAAAACTAAAAAGCTTATCCCGCCAATACAACGCTCCGTTTTTGTTTGAAACGAATGTTGGTGCAGGACTGC CAATTATCGATACGGTAAAAAACCTGATTGCATCTGGCGATAAAGTGCATAAAATCCAAGCGGTTTTATCAGGAAGTTTG AACTTTATTTTCAACAATTTTGACGAAAATAACTCTTTCCACGACGTGGTAAAAGAAGCCGGAGTACAAGGATTTACAGA ACCAGATCCAAAAATCGACTTAAGCGGAATCGACGTGGCTCGTAAAATCCTGATCTTAATTCGCGAAAGCGGTTACGAAA TGGATATTGATGCCATTGCAAACGAATCGTTCCTGCCGGCAGAATGTTTAGCAACAACAAACAACGAAGATTTCTTCGCA TCGTTAATCAAACACGCTGCTCATTTTGAAGGTATTTATAAAGAAGCTTTAGCCAAAGATTCAAGATTGAAATACGTGGC ACAATTCGAAAACGGAAAAGCAAGCGTAGGTCTGCAATTCATCCCAAAAGAGCATCCTTTCTACAATTTAGAAGGAAAAG ATAATATCGTGCTTTTCTACACAGATCGTTACGTAGATCAGCCTTTATTAATCAAAGGAGCCGGTGCCGGAGCAGCTGTG ACAGCATCAGGAATTTTTGCTGACGTTATTCGAATAGGAAACATTTAG
Upstream 100 bases:
>100_bases AAAAGAAAAAAAATAGCCGCAGTTTTCAGTTTCAGCTCACAGTTAATAGCCTTTGAACCTTTGTTACTCAAAATTGCACC TTATTAAAAAATATCACAAA
Downstream 100 bases:
>100_bases TGAGGTGCTAAGATACTAAGGTGCTAAGGTTCTAAGTTTTTTTATCTACTAAACCTTAGAACCTCAGCAACTCAGAGTCT CAAAACCTTAAAAAAAAATG
Product: bifunctional aspartokinase I/homoserine dehydrogenase I
Products: NA
Alternate protein names: Aspartokinase I/homoserine dehydrogenase I; AKI-HDI; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 815; Mature: 815
Protein sequence:
>815_residues MKVLKFGGTSVANAQNIKLVLEIVNKKAANDKLVVVVSALSKVTDLLQSAAAKAAANDESFREVVAEIEKKHLDTLKELI PVSEQSSLLSHVKRIINHLETLLDGCFLLGELSPRTADTILSFGELLSSFIIAQAFQQTEKDAVYKDSRELIKTDNNFGK AAVNFEVSNQLIKEYFAGNKAKINILPGFIAQTLDGITSTLGRGGSDYTAAIIAGALDAEQLEIWTDVNGMFTANPKIVK QAQPIANISYQEAMELSHFGAKVLYPPTIQPVLRKNIPILIKNTFEPEAVGTLISDTVVSKDTVVKGISHIDNISLVTLE GPGMIGVAGSSRRLFEVLSQEKINVIFITQASSEHSICIGILNSDADKAEAAINRAFEIEISQNKIDPCYVEKDLCIIAL VGENMKNHQGLSGRMFSTLGKNNVNIRAIAQGASERNISTVINERDVKKALNTLHENFFEENTKQLNLFVMGVGNVGEKF IEQIHSQKKFLKDVLKINVRVIALSNSRKMIFDEDGISLKDWQSTLEKGENAVAAEFIARAKELNLRNSIFVDITANASV SEMYEKFLKESIAVVTCNKIACSSAYDNYKKLKSLSRQYNAPFLFETNVGAGLPIIDTVKNLIASGDKVHKIQAVLSGSL NFIFNNFDENNSFHDVVKEAGVQGFTEPDPKIDLSGIDVARKILILIRESGYEMDIDAIANESFLPAECLATTNNEDFFA SLIKHAAHFEGIYKEALAKDSRLKYVAQFENGKASVGLQFIPKEHPFYNLEGKDNIVLFYTDRYVDQPLLIKGAGAGAAV TASGIFADVIRIGNI
Sequences:
>Translated_815_residues MKVLKFGGTSVANAQNIKLVLEIVNKKAANDKLVVVVSALSKVTDLLQSAAAKAAANDESFREVVAEIEKKHLDTLKELI PVSEQSSLLSHVKRIINHLETLLDGCFLLGELSPRTADTILSFGELLSSFIIAQAFQQTEKDAVYKDSRELIKTDNNFGK AAVNFEVSNQLIKEYFAGNKAKINILPGFIAQTLDGITSTLGRGGSDYTAAIIAGALDAEQLEIWTDVNGMFTANPKIVK QAQPIANISYQEAMELSHFGAKVLYPPTIQPVLRKNIPILIKNTFEPEAVGTLISDTVVSKDTVVKGISHIDNISLVTLE GPGMIGVAGSSRRLFEVLSQEKINVIFITQASSEHSICIGILNSDADKAEAAINRAFEIEISQNKIDPCYVEKDLCIIAL VGENMKNHQGLSGRMFSTLGKNNVNIRAIAQGASERNISTVINERDVKKALNTLHENFFEENTKQLNLFVMGVGNVGEKF IEQIHSQKKFLKDVLKINVRVIALSNSRKMIFDEDGISLKDWQSTLEKGENAVAAEFIARAKELNLRNSIFVDITANASV SEMYEKFLKESIAVVTCNKIACSSAYDNYKKLKSLSRQYNAPFLFETNVGAGLPIIDTVKNLIASGDKVHKIQAVLSGSL NFIFNNFDENNSFHDVVKEAGVQGFTEPDPKIDLSGIDVARKILILIRESGYEMDIDAIANESFLPAECLATTNNEDFFA SLIKHAAHFEGIYKEALAKDSRLKYVAQFENGKASVGLQFIPKEHPFYNLEGKDNIVLFYTDRYVDQPLLIKGAGAGAAV TASGIFADVIRIGNI >Mature_815_residues MKVLKFGGTSVANAQNIKLVLEIVNKKAANDKLVVVVSALSKVTDLLQSAAAKAAANDESFREVVAEIEKKHLDTLKELI PVSEQSSLLSHVKRIINHLETLLDGCFLLGELSPRTADTILSFGELLSSFIIAQAFQQTEKDAVYKDSRELIKTDNNFGK AAVNFEVSNQLIKEYFAGNKAKINILPGFIAQTLDGITSTLGRGGSDYTAAIIAGALDAEQLEIWTDVNGMFTANPKIVK QAQPIANISYQEAMELSHFGAKVLYPPTIQPVLRKNIPILIKNTFEPEAVGTLISDTVVSKDTVVKGISHIDNISLVTLE GPGMIGVAGSSRRLFEVLSQEKINVIFITQASSEHSICIGILNSDADKAEAAINRAFEIEISQNKIDPCYVEKDLCIIAL VGENMKNHQGLSGRMFSTLGKNNVNIRAIAQGASERNISTVINERDVKKALNTLHENFFEENTKQLNLFVMGVGNVGEKF IEQIHSQKKFLKDVLKINVRVIALSNSRKMIFDEDGISLKDWQSTLEKGENAVAAEFIARAKELNLRNSIFVDITANASV SEMYEKFLKESIAVVTCNKIACSSAYDNYKKLKSLSRQYNAPFLFETNVGAGLPIIDTVKNLIASGDKVHKIQAVLSGSL NFIFNNFDENNSFHDVVKEAGVQGFTEPDPKIDLSGIDVARKILILIRESGYEMDIDAIANESFLPAECLATTNNEDFFA SLIKHAAHFEGIYKEALAKDSRLKYVAQFENGKASVGLQFIPKEHPFYNLEGKDNIVLFYTDRYVDQPLLIKGAGAGAAV TASGIFADVIRIGNI
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=819, Percent_Identity=36.7521367521368, Blast_Score=508, Evalue=1e-145, Organism=Escherichia coli, GI1790376, Length=827, Percent_Identity=26.2394195888754, Blast_Score=302, Evalue=6e-83, Organism=Escherichia coli, GI1790455, Length=462, Percent_Identity=30.7359307359307, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320893, Length=508, Percent_Identity=30.1181102362205, Blast_Score=196, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322599, Length=364, Percent_Identity=34.3406593406593, Blast_Score=171, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 89354; Mature: 89354
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLKFGGTSVANAQNIKLVLEIVNKKAANDKLVVVVSALSKVTDLLQSAAAKAAANDES CCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHH FREVVAEIEKKHLDTLKELIPVSEQSSLLSHVKRIINHLETLLDGCFLLGELSPRTADTI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LSFGELLSSFIIAQAFQQTEKDAVYKDSRELIKTDNNFGKAAVNFEVSNQLIKEYFAGNK HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCC AKINILPGFIAQTLDGITSTLGRGGSDYTAAIIAGALDAEQLEIWTDVNGMFTANPKIVK EEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEECCCCEEECCCHHHH QAQPIANISYQEAMELSHFGAKVLYPPTIQPVLRKNIPILIKNTFEPEAVGTLISDTVVS HCCCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHHC KDTVVKGISHIDNISLVTLEGPGMIGVAGSSRRLFEVLSQEKINVIFITQASSEHSICIG HHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEE ILNSDADKAEAAINRAFEIEISQNKIDPCYVEKDLCIIALVGENMKNHQGLSGRMFSTLG EECCCCHHHHHHHCCEEEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHCC KNNVNIRAIAQGASERNISTVINERDVKKALNTLHENFFEENTKQLNLFVMGVGNVGEKF CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHH IEQIHSQKKFLKDVLKINVRVIALSNSRKMIFDEDGISLKDWQSTLEKGENAVAAEFIAR HHHHHHHHHHHHHHHHCEEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHH AKELNLRNSIFVDITANASVSEMYEKFLKESIAVVTCNKIACSSAYDNYKKLKSLSRQYN HHHCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC APFLFETNVGAGLPIIDTVKNLIASGDKVHKIQAVLSGSLNFIFNNFDENNSFHDVVKEA CCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHC GVQGFTEPDPKIDLSGIDVARKILILIRESGYEMDIDAIANESFLPAECLATTNNEDFFA CCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCHHHHCCCCCHHHHH SLIKHAAHFEGIYKEALAKDSRLKYVAQFENGKASVGLQFIPKEHPFYNLEGKDNIVLFY HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECEEECCCCCCEEECCCCCCEEEEE TDRYVDQPLLIKGAGAGAAVTASGIFADVIRIGNI ECCCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCC >Mature Secondary Structure MKVLKFGGTSVANAQNIKLVLEIVNKKAANDKLVVVVSALSKVTDLLQSAAAKAAANDES CCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHH FREVVAEIEKKHLDTLKELIPVSEQSSLLSHVKRIINHLETLLDGCFLLGELSPRTADTI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LSFGELLSSFIIAQAFQQTEKDAVYKDSRELIKTDNNFGKAAVNFEVSNQLIKEYFAGNK HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCC AKINILPGFIAQTLDGITSTLGRGGSDYTAAIIAGALDAEQLEIWTDVNGMFTANPKIVK EEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEECCCCEEECCCHHHH QAQPIANISYQEAMELSHFGAKVLYPPTIQPVLRKNIPILIKNTFEPEAVGTLISDTVVS HCCCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHHC KDTVVKGISHIDNISLVTLEGPGMIGVAGSSRRLFEVLSQEKINVIFITQASSEHSICIG HHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEE ILNSDADKAEAAINRAFEIEISQNKIDPCYVEKDLCIIALVGENMKNHQGLSGRMFSTLG EECCCCHHHHHHHCCEEEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHCC KNNVNIRAIAQGASERNISTVINERDVKKALNTLHENFFEENTKQLNLFVMGVGNVGEKF CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHH IEQIHSQKKFLKDVLKINVRVIALSNSRKMIFDEDGISLKDWQSTLEKGENAVAAEFIAR HHHHHHHHHHHHHHHHCEEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHH AKELNLRNSIFVDITANASVSEMYEKFLKESIAVVTCNKIACSSAYDNYKKLKSLSRQYN HHHCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC APFLFETNVGAGLPIIDTVKNLIASGDKVHKIQAVLSGSLNFIFNNFDENNSFHDVVKEA CCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHC GVQGFTEPDPKIDLSGIDVARKILILIRESGYEMDIDAIANESFLPAECLATTNNEDFFA CCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCHHHHCCCCCHHHHH SLIKHAAHFEGIYKEALAKDSRLKYVAQFENGKASVGLQFIPKEHPFYNLEGKDNIVLFY HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECEEECCCCCCEEECCCCCCEEEEE TDRYVDQPLLIKGAGAGAAVTASGIFADVIRIGNI ECCCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8423151 [H]