| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300248
Identifier: 146300248
GI number: 146300248
Start: 2981518
End: 2982186
Strand: Reverse
Name: 146300248
Synonym: Fjoh_2493
Alternate gene names: NA
Gene position: 2982186-2981518 (Counterclockwise)
Preceding gene: 146300249
Following gene: 146300245
Centisome position: 48.91
GC content: 34.08
Gene sequence:
>669_bases ATGAATTATCTACTACCCTTATTTTCTGTACTTTTAGGATATAGTGTGGCTTTGTTTATAAAACCCGAAAACAAAACCAA TTTAAAATTGCTTCTGGCATTCAGCGGTTCATTTTTGTTATCGTTAACTGTAATGCATCTTCTGCCCGAAGTTTACAGTA CTCACAATCATAAAATTGGAATATTTATAATGATTGGGATTTTATTTCAGATTGTTTTGGAATTTTTCTCAAAAGGAGCT GAACACGGACATGTTCATGGTCATGCAAAAATGTCACAGATTCCGTGGTTGCTTTTCATCAGTTTGTGTATTCATGCCTT TTTAGAAGGATTTCCGGTAAGTCATCATCATGATCTGGCCGTCGGAATTGCCATTCATCATTTGCCAATTGCTGTGATTC TAACGACATTTTTTATCAATGCCGATCTTAACAAAAAAGCTATTTTTGCTTTTATGCTGACTTTTGCCCTCATGACACCG CTTGGAACTGTGGCTTCTCAATATTTACAATTCTTAAACGATTATTATACCGAAATAACAGCCATTGTAATTGGTATTTT ATTCCATATTTCTTCGACCATTATTTTTGAAAGCAGCGAAGGACACAAATTTAATATCGCCAAAGTTTCGATGATTGTTC TCGGAATCATATTGGCATCTTTTTTATAA
Upstream 100 bases:
>100_bases AATAGGTTTAATTGGTAAACCGTTTATTTGTTTAACCGTCAAACCGATTAAACAAATACAACGATTAAACGATTAAACAA CAAAAAACGATTAAACAAAA
Downstream 100 bases:
>100_bases TCTGGACAATTTAATAAAAATGCTCCAGAGGAGCAGAATATCTATAACAATTATTTCCCCTTGATTTCAAGCTCCAGAGG AGCGAAACCTACATTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: ZIP Family Metal Transporter; ZIP Zinc Transporter
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNYLLPLFSVLLGYSVALFIKPENKTNLKLLLAFSGSFLLSLTVMHLLPEVYSTHNHKIGIFIMIGILFQIVLEFFSKGA EHGHVHGHAKMSQIPWLLFISLCIHAFLEGFPVSHHHDLAVGIAIHHLPIAVILTTFFINADLNKKAIFAFMLTFALMTP LGTVASQYLQFLNDYYTEITAIVIGILFHISSTIIFESSEGHKFNIAKVSMIVLGIILASFL
Sequences:
>Translated_222_residues MNYLLPLFSVLLGYSVALFIKPENKTNLKLLLAFSGSFLLSLTVMHLLPEVYSTHNHKIGIFIMIGILFQIVLEFFSKGA EHGHVHGHAKMSQIPWLLFISLCIHAFLEGFPVSHHHDLAVGIAIHHLPIAVILTTFFINADLNKKAIFAFMLTFALMTP LGTVASQYLQFLNDYYTEITAIVIGILFHISSTIIFESSEGHKFNIAKVSMIVLGIILASFL >Mature_222_residues MNYLLPLFSVLLGYSVALFIKPENKTNLKLLLAFSGSFLLSLTVMHLLPEVYSTHNHKIGIFIMIGILFQIVLEFFSKGA EHGHVHGHAKMSQIPWLLFISLCIHAFLEGFPVSHHHDLAVGIAIHHLPIAVILTTFFINADLNKKAIFAFMLTFALMTP LGTVASQYLQFLNDYYTEITAIVIGILFHISSTIIFESSEGHKFNIAKVSMIVLGIILASFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24781; Mature: 24781
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLLPLFSVLLGYSVALFIKPENKTNLKLLLAFSGSFLLSLTVMHLLPEVYSTHNHKIG CCHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHH IFIMIGILFQIVLEFFSKGAEHGHVHGHAKMSQIPWLLFISLCIHAFLEGFPVSHHHDLA HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH VGIAIHHLPIAVILTTFFINADLNKKAIFAFMLTFALMTPLGTVASQYLQFLNDYYTEIT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AIVIGILFHISSTIIFESSEGHKFNIAKVSMIVLGIILASFL HHHHHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNYLLPLFSVLLGYSVALFIKPENKTNLKLLLAFSGSFLLSLTVMHLLPEVYSTHNHKIG CCHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHH IFIMIGILFQIVLEFFSKGAEHGHVHGHAKMSQIPWLLFISLCIHAFLEGFPVSHHHDLA HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH VGIAIHHLPIAVILTTFFINADLNKKAIFAFMLTFALMTPLGTVASQYLQFLNDYYTEIT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AIVIGILFHISSTIIFESSEGHKFNIAKVSMIVLGIILASFL HHHHHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA