| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yqeM [H]
Identifier: 146300249
GI number: 146300249
Start: 2982282
End: 2983046
Strand: Reverse
Name: yqeM [H]
Synonym: Fjoh_2494
Alternate gene names: 146300249
Gene position: 2983046-2982282 (Counterclockwise)
Preceding gene: 146300253
Following gene: 146300248
Centisome position: 48.93
GC content: 33.2
Gene sequence:
>765_bases ATGTCTGACGCACCGAACTCATCAACACCAAATCAGGAAAGAAACACTGAAAACTGGTTTACATCATGGTTTGATACTCC ATATTATCATATTCTGTATAAGGATAGAAACTATAGAGAAGCTCAGATTTTCATGGATAATTTAACGCATTATTTAAATC TTCCCGAAAAAGCTAAAGTTCTTGACTTAGCCTGCGGAAAAGGACGCCATTCTATTTACTTAAACCAATTAGGTTATAAT GTTTTAGGCGCAGATTTATCTGAAAACAGCATCGCCGAAGCGAATAAAAACAGCAACGAACATCTTCATTTTAAAGTGCA CGATATGCGCGAACCTTTTGAAGAAAAATTCGATGCCATTTTTAATCTTTTTACCAGCTTTGGTTACTTCGAAAATGACG ATGATAACCTGACAACACTAAAAGCCATCAAAGAAAGCTTATCTGAATATGGTTTTGCGGTTATCGATTTTATGAATGTA AATCAGGTAATTGAAACTCTCGTTCCTGAGGAAGTTAAAACCGTTGACGGAATTGATTTTCACATCAAAAGATATGTAGA AGACGGACATATTTTAAAAGAAATTGATTTTGAAGACCAAGGCAGAAAATACCATTTTACCGAAAAAGTAAAAGCCTTAA CTTTAAAAGATTTTCAGGATTTAATGGATGAAGCCGGAATCTATCTTTTAGATATCTTTGGAGATTATAAGCTTAAAAAG TTCCATAAAACTGAAAGCGAAAGATTAATCATGATTTTTAAATAG
Upstream 100 bases:
>100_bases TTAAAAACAACCCCAATCGCAGACAGATGCCGCGAAATAGTTATTTTTCGGCAAAAATACACTAAATTTGCCGGACTTTG AATTAATTGAAATAGAATAA
Downstream 100 bases:
>100_bases GTTTAATTGGTAAACCGTTTATTTGTTTAACCGTCAAACCGATTAAACAAATACAACGATTAAACGATTAAACAACAAAA AACGATTAAACAAAAATGAA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSDAPNSSTPNQERNTENWFTSWFDTPYYHILYKDRNYREAQIFMDNLTHYLNLPEKAKVLDLACGKGRHSIYLNQLGYN VLGADLSENSIAEANKNSNEHLHFKVHDMREPFEEKFDAIFNLFTSFGYFENDDDNLTTLKAIKESLSEYGFAVIDFMNV NQVIETLVPEEVKTVDGIDFHIKRYVEDGHILKEIDFEDQGRKYHFTEKVKALTLKDFQDLMDEAGIYLLDIFGDYKLKK FHKTESERLIMIFK
Sequences:
>Translated_254_residues MSDAPNSSTPNQERNTENWFTSWFDTPYYHILYKDRNYREAQIFMDNLTHYLNLPEKAKVLDLACGKGRHSIYLNQLGYN VLGADLSENSIAEANKNSNEHLHFKVHDMREPFEEKFDAIFNLFTSFGYFENDDDNLTTLKAIKESLSEYGFAVIDFMNV NQVIETLVPEEVKTVDGIDFHIKRYVEDGHILKEIDFEDQGRKYHFTEKVKALTLKDFQDLMDEAGIYLLDIFGDYKLKK FHKTESERLIMIFK >Mature_253_residues SDAPNSSTPNQERNTENWFTSWFDTPYYHILYKDRNYREAQIFMDNLTHYLNLPEKAKVLDLACGKGRHSIYLNQLGYNV LGADLSENSIAEANKNSNEHLHFKVHDMREPFEEKFDAIFNLFTSFGYFENDDDNLTTLKAIKESLSEYGFAVIDFMNVN QVIETLVPEEVKTVDGIDFHIKRYVEDGHILKEIDFEDQGRKYHFTEKVKALTLKDFQDLMDEAGIYLLDIFGDYKLKKF HKTESERLIMIFK
Specific function: May be a S-adenosyl-L-methionine (SAM)-dependent methyltransferase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29875; Mature: 29744
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAPNSSTPNQERNTENWFTSWFDTPYYHILYKDRNYREAQIFMDNLTHYLNLPEKAKV CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHE LDLACGKGRHSIYLNQLGYNVLGADLSENSIAEANKNSNEHLHFKVHDMREPFEEKFDAI EEHHCCCCCCEEEEECCCCEEECCCCCCCCHHHCCCCCCCEEEEEEHHHCCHHHHHHHHH FNLFTSFGYFENDDDNLTTLKAIKESLSEYGFAVIDFMNVNQVIETLVPEEVKTVDGIDF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCHHHHHCCCCHH HIKRYVEDGHILKEIDFEDQGRKYHFTEKVKALTLKDFQDLMDEAGIYLLDIFGDYKLKK HHHHHHCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHH FHKTESERLIMIFK HHCCCCCCEEEEEC >Mature Secondary Structure SDAPNSSTPNQERNTENWFTSWFDTPYYHILYKDRNYREAQIFMDNLTHYLNLPEKAKV CCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHE LDLACGKGRHSIYLNQLGYNVLGADLSENSIAEANKNSNEHLHFKVHDMREPFEEKFDAI EEHHCCCCCCEEEEECCCCEEECCCCCCCCHHHCCCCCCCEEEEEEHHHCCHHHHHHHHH FNLFTSFGYFENDDDNLTTLKAIKESLSEYGFAVIDFMNVNQVIETLVPEEVKTVDGIDF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCHHHHHCCCCHH HIKRYVEDGHILKEIDFEDQGRKYHFTEKVKALTLKDFQDLMDEAGIYLLDIFGDYKLKK HHHHHHCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHH FHKTESERLIMIFK HHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 7968523 [H]