| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300236
Identifier: 146300236
GI number: 146300236
Start: 2972264
End: 2972668
Strand: Reverse
Name: 146300236
Synonym: Fjoh_2481
Alternate gene names: NA
Gene position: 2972668-2972264 (Counterclockwise)
Preceding gene: 146300237
Following gene: 146300235
Centisome position: 48.76
GC content: 32.84
Gene sequence:
>405_bases ATGATAAAAGCCATGGGCTTAAAGCATAAAAAAATGAAAAAAATACTATTCTTATTTCCGGTACTGGCTTTAGTTTCCTG TTATAATGCCGAACATAATTGCAAAGATTTCAAAAACGGAAAATTTAAATTTGAGTTTGAAGTAAACGGCGTAAAAAAGG TGACTTTTTTTGAACGCAAGGACAGCATCGAAATTGAAACTTTTGAAGGAAAAACAGATACTGCAACCATTCGCTGGGTA AGTGACTGCGAATATGTACTGCAAAAAAAACATCCAAAAAATATGGCTGAAGAAAAAGCCATAAGCATGAAAATTTTAAC AACAGCAAAAGATTCTTATACTTTTGAATTTGGAATGGTTGGTTCTGAAGAGAAACAACGAGGCACTGTTCACAAAGTTG ATTAA
Upstream 100 bases:
>100_bases TATCAATTCCGAAAAATAAATCCGGAAATTATAACGCCGAAAAGTTTGCCAAAGAAAAAGAAATCAAGAACTTTACCGAT GATGAATTAAAGAGATTGAA
Downstream 100 bases:
>100_bases ATCTGATTTTATAATATAAAGCTCCTTATGGGGCTTTTTTTATGCCGTTAAGCCACTAAGTTTTTTGTATTCTCATTTTT AAAAACCTTACAGCTCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MIKAMGLKHKKMKKILFLFPVLALVSCYNAEHNCKDFKNGKFKFEFEVNGVKKVTFFERKDSIEIETFEGKTDTATIRWV SDCEYVLQKKHPKNMAEEKAISMKILTTAKDSYTFEFGMVGSEEKQRGTVHKVD
Sequences:
>Translated_134_residues MIKAMGLKHKKMKKILFLFPVLALVSCYNAEHNCKDFKNGKFKFEFEVNGVKKVTFFERKDSIEIETFEGKTDTATIRWV SDCEYVLQKKHPKNMAEEKAISMKILTTAKDSYTFEFGMVGSEEKQRGTVHKVD >Mature_134_residues MIKAMGLKHKKMKKILFLFPVLALVSCYNAEHNCKDFKNGKFKFEFEVNGVKKVTFFERKDSIEIETFEGKTDTATIRWV SDCEYVLQKKHPKNMAEEKAISMKILTTAKDSYTFEFGMVGSEEKQRGTVHKVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15541; Mature: 15541
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKAMGLKHKKMKKILFLFPVLALVSCYNAEHNCKDFKNGKFKFEFEVNGVKKVTFFERK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEEECC DSIEIETFEGKTDTATIRWVSDCEYVLQKKHPKNMAEEKAISMKILTTAKDSYTFEFGMV CCEEEEEECCCCCEEEEEEECHHHHHHHCCCCCCHHHHHHEEEEEEEECCCCEEEEECCC GSEEKQRGTVHKVD CCCHHHCCCEECCC >Mature Secondary Structure MIKAMGLKHKKMKKILFLFPVLALVSCYNAEHNCKDFKNGKFKFEFEVNGVKKVTFFERK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEEECC DSIEIETFEGKTDTATIRWVSDCEYVLQKKHPKNMAEEKAISMKILTTAKDSYTFEFGMV CCEEEEEECCCCCEEEEEEECHHHHHHHCCCCCCHHHHHHEEEEEEEECCCCEEEEECCC GSEEKQRGTVHKVD CCCHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA