Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300235

Identifier: 146300235

GI number: 146300235

Start: 2970160

End: 2972079

Strand: Reverse

Name: 146300235

Synonym: Fjoh_2480

Alternate gene names: NA

Gene position: 2972079-2970160 (Counterclockwise)

Preceding gene: 146300236

Following gene: 146300234

Centisome position: 48.75

GC content: 35.62

Gene sequence:

>1920_bases
ATGAAAAATACCATTTCGCAAAGAGTTGCCGACTTTTTAAAAAATTATCCGCCTTTTAATTTCCTGCATCCAATGGATCT
TGAAAAGCTTTCGGAACAAATTTCTATTGTTTATAAAGATAAAGACGCCGTAATTTTTGCCGAAAATGATAAAACACATG
ATTCTTTTTATGTGGTACATAAAGGTGCGGTGGCACTCAAAAAAAGCACAAAAAACTCAGTTTTAGATATGTGCGACGAA
GGCGATATATTTGGACTTCGCCCACTTTTGGCACAGGAAAATTACATTATGGAAGCGGTGGCGCATGAAGAAAGTATTCT
TTACGCCATTCCTATTGCCGTTTTTAAACCTTACGCACTTGAAAACAGAAATGTGGGTAATTTCCTGATCGAAAGTTATG
CTTCTAACACAAGAAATCCGTATTCTGACATTCATAAAGACAAATTATACGGTGATGATCTCTTAAATGAAAATCTGCAT
TCCAGCAATCATTCTTTTGATTTAGCACCGATAAAATATTCAAAAAAAATAGTAACCTGCAGTCCGTCAACTACCGTTAA
AGAAATTGCCAGGATAATGAATAAAAAGAAAGTCGGAGTGATTTTAATTGTAGACGAAATGCTGCCAATAGGAATTTTGA
CAGATAAAGATCTCCGCAATAAAATTGTAACAGGAGATTTTCCGATTACCACAACGGCCGAAACGATAATGACAAAACCC
GTTATTACGTATCCAAAAAAAATGACCGTTACAGAAGCTCAAATGGCGATGATGAAAAGCAACATCAGCCATTTATGCCT
TACTAAAGATGGTACTGTTAATACCAAAGCTGTCGGGATTTTGTCGAAACACGATGTAATGGTGGCTTTAGGAAATAATC
CAGCCGTTTTAATTAAAGCTTTAAAAAGAGCTAAAAAAACAAAGGAAATAAAACCTATTCGAAACCGAATCATGCAGCTG
CTTCAGGGATATTTAGATCAAAATATTCCGATGACTTTAATTTCTAAAATCATAACAGAGCTCAATGAAGCTTGTACAAC
TCGTGTTATTGAAATATGTTTAGAAAAAATGAGCAGTCCGCCGCCGGTAAAATTTGCGTGGCTGGCAATGGGAAGTCAGG
GACGTGGTGAACAAATGCTGCATACAGATCAGGATAATGCGATTGTTTACGAAAATGTAAATGAAGTTTTTAGGGACGAA
ACGAGAATTTATTTTCTGAAATTTGCCGGACTTGTTAATAAAGGTCTCTTTGAAATTGGTTACGATTATTGCCCTGCAGA
TATGATGGCATCAAGTCCAAAATGGTGTATGAGTCTGGATGAATGGAAAAATCAGGTACACCACTGGATTACCAATCCGG
GGAAAAATGAGGTTTTATTGTCGTTCATTTTCTTTGATTACAGCATGACATACGGCGACGCTGAAACTGTAGATCAATTA
TCAGAATATATTTTTGAAACCATAAAAGCAAACCCGATTTTTTATATGCATTTAGTGAGCGGTGCTTTACAAAGCCCGTC
TCCTACTGGTTTCTTCAGACAATTTTTAGTAGAGCAAGACGGTGCCAATAAAGATAATTTTGATATTAAACGAAGAGCTT
TAATGCCGTTGACAGATGCTGCGCGTGTTTTGATTTTATCACATTCTGTAAAGTCAATCAGCAATACGGCAGAACGCTTT
GAAAAACTGGCCGAACTAGAACCTAATAATCGTGAATTGTATTTATCATGTTCATATTCTTTTAAAGCTTTACTGAAATT
CAGAACCAAACAAGGGCTTTTACATCATGATTCGGGTCAGTTTATTGAACTTGAATCTCTAACCAAAATGGAGAAAATTA
AACTGAAACGCACTTTTAAAACCATTAAAGAGCTTCAGGAATTAATTTCTGTTCGTTTTAATATTTCAAATCTGGTATAA

Upstream 100 bases:

>100_bases
ACCTTACAGCTCTGTATCTTTTCTCTTTACTACTAAAAAATAAACGTGTTTCTTTTACATTTCTATTTTAAATAGTACAT
TAGAACTCTAATCTAACCCA

Downstream 100 bases:

>100_bases
AATGGGATTATTCAGTTTTTGGAAAAAAGAAGAAAATCTCTTCGATGAAAGTATTACTATAGAAGAAACCAGGTTTGTGG
TTTTAGATACCGAAACTACT

Product: CBS domain-containing protein

Products: NA

Alternate protein names: OrfX [H]

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MKNTISQRVADFLKNYPPFNFLHPMDLEKLSEQISIVYKDKDAVIFAENDKTHDSFYVVHKGAVALKKSTKNSVLDMCDE
GDIFGLRPLLAQENYIMEAVAHEESILYAIPIAVFKPYALENRNVGNFLIESYASNTRNPYSDIHKDKLYGDDLLNENLH
SSNHSFDLAPIKYSKKIVTCSPSTTVKEIARIMNKKKVGVILIVDEMLPIGILTDKDLRNKIVTGDFPITTTAETIMTKP
VITYPKKMTVTEAQMAMMKSNISHLCLTKDGTVNTKAVGILSKHDVMVALGNNPAVLIKALKRAKKTKEIKPIRNRIMQL
LQGYLDQNIPMTLISKIITELNEACTTRVIEICLEKMSSPPPVKFAWLAMGSQGRGEQMLHTDQDNAIVYENVNEVFRDE
TRIYFLKFAGLVNKGLFEIGYDYCPADMMASSPKWCMSLDEWKNQVHHWITNPGKNEVLLSFIFFDYSMTYGDAETVDQL
SEYIFETIKANPIFYMHLVSGALQSPSPTGFFRQFLVEQDGANKDNFDIKRRALMPLTDAARVLILSHSVKSISNTAERF
EKLAELEPNNRELYLSCSYSFKALLKFRTKQGLLHHDSGQFIELESLTKMEKIKLKRTFKTIKELQELISVRFNISNLV

Sequences:

>Translated_639_residues
MKNTISQRVADFLKNYPPFNFLHPMDLEKLSEQISIVYKDKDAVIFAENDKTHDSFYVVHKGAVALKKSTKNSVLDMCDE
GDIFGLRPLLAQENYIMEAVAHEESILYAIPIAVFKPYALENRNVGNFLIESYASNTRNPYSDIHKDKLYGDDLLNENLH
SSNHSFDLAPIKYSKKIVTCSPSTTVKEIARIMNKKKVGVILIVDEMLPIGILTDKDLRNKIVTGDFPITTTAETIMTKP
VITYPKKMTVTEAQMAMMKSNISHLCLTKDGTVNTKAVGILSKHDVMVALGNNPAVLIKALKRAKKTKEIKPIRNRIMQL
LQGYLDQNIPMTLISKIITELNEACTTRVIEICLEKMSSPPPVKFAWLAMGSQGRGEQMLHTDQDNAIVYENVNEVFRDE
TRIYFLKFAGLVNKGLFEIGYDYCPADMMASSPKWCMSLDEWKNQVHHWITNPGKNEVLLSFIFFDYSMTYGDAETVDQL
SEYIFETIKANPIFYMHLVSGALQSPSPTGFFRQFLVEQDGANKDNFDIKRRALMPLTDAARVLILSHSVKSISNTAERF
EKLAELEPNNRELYLSCSYSFKALLKFRTKQGLLHHDSGQFIELESLTKMEKIKLKRTFKTIKELQELISVRFNISNLV
>Mature_639_residues
MKNTISQRVADFLKNYPPFNFLHPMDLEKLSEQISIVYKDKDAVIFAENDKTHDSFYVVHKGAVALKKSTKNSVLDMCDE
GDIFGLRPLLAQENYIMEAVAHEESILYAIPIAVFKPYALENRNVGNFLIESYASNTRNPYSDIHKDKLYGDDLLNENLH
SSNHSFDLAPIKYSKKIVTCSPSTTVKEIARIMNKKKVGVILIVDEMLPIGILTDKDLRNKIVTGDFPITTTAETIMTKP
VITYPKKMTVTEAQMAMMKSNISHLCLTKDGTVNTKAVGILSKHDVMVALGNNPAVLIKALKRAKKTKEIKPIRNRIMQL
LQGYLDQNIPMTLISKIITELNEACTTRVIEICLEKMSSPPPVKFAWLAMGSQGRGEQMLHTDQDNAIVYENVNEVFRDE
TRIYFLKFAGLVNKGLFEIGYDYCPADMMASSPKWCMSLDEWKNQVHHWITNPGKNEVLLSFIFFDYSMTYGDAETVDQL
SEYIFETIKANPIFYMHLVSGALQSPSPTGFFRQFLVEQDGANKDNFDIKRRALMPLTDAARVLILSHSVKSISNTAERF
EKLAELEPNNRELYLSCSYSFKALLKFRTKQGLLHHDSGQFIELESLTKMEKIKLKRTFKTIKELQELISVRFNISNLV

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 72717; Mature: 72717

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTISQRVADFLKNYPPFNFLHPMDLEKLSEQISIVYKDKDAVIFAENDKTHDSFYVVH
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEEEEECCCEEEEECCCCCCCCEEEEE
KGAVALKKSTKNSVLDMCDEGDIFGLRPLLAQENYIMEAVAHEESILYAIPIAVFKPYAL
CCCEEEHHCCHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHCCCCEEEEEHHHHHCCHHC
ENRNVGNFLIESYASNTRNPYSDIHKDKLYGDDLLNENLHSSNHSFDLAPIKYSKKIVTC
CCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEEECCEEEEE
SPSTTVKEIARIMNKKKVGVILIVDEMLPIGILTDKDLRNKIVTGDFPITTTAETIMTKP
CCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHCCEEECCCCCCCCHHHHHCCC
VITYPKKMTVTEAQMAMMKSNISHLCLTKDGTVNTKAVGILSKHDVMVALGNNPAVLIKA
CEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCEEEEECCCHHHHHHH
LKRAKKTKEIKPIRNRIMQLLQGYLDQNIPMTLISKIITELNEACTTRVIEICLEKMSSP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PPVKFAWLAMGSQGRGEQMLHTDQDNAIVYENVNEVFRDETRIYFLKFAGLVNKGLFEIG
CCCEEEEEEECCCCCCCCCEECCCCCEEEECCHHHHHCCCCEEEEEEEHHHHHCCHHHHC
YDYCPADMMASSPKWCMSLDEWKNQVHHWITNPGKNEVLLSFIFFDYSMTYGDAETVDQL
CCCCCHHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCHHEEEEEEHHHHCCCCCHHHHHHH
SEYIFETIKANPIFYMHLVSGALQSPSPTGFFRQFLVEQDGANKDNFDIKRRALMPLTDA
HHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHH
ARVLILSHSVKSISNTAERFEKLAELEPNNRELYLSCSYSFKALLKFRTKQGLLHHDSGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCEECCCCC
FIELESLTKMEKIKLKRTFKTIKELQELISVRFNISNLV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNTISQRVADFLKNYPPFNFLHPMDLEKLSEQISIVYKDKDAVIFAENDKTHDSFYVVH
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEEEEECCCEEEEECCCCCCCCEEEEE
KGAVALKKSTKNSVLDMCDEGDIFGLRPLLAQENYIMEAVAHEESILYAIPIAVFKPYAL
CCCEEEHHCCHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHCCCCEEEEEHHHHHCCHHC
ENRNVGNFLIESYASNTRNPYSDIHKDKLYGDDLLNENLHSSNHSFDLAPIKYSKKIVTC
CCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEEECCEEEEE
SPSTTVKEIARIMNKKKVGVILIVDEMLPIGILTDKDLRNKIVTGDFPITTTAETIMTKP
CCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHCCEEECCCCCCCCHHHHHCCC
VITYPKKMTVTEAQMAMMKSNISHLCLTKDGTVNTKAVGILSKHDVMVALGNNPAVLIKA
CEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCEEEEECCCHHHHHHH
LKRAKKTKEIKPIRNRIMQLLQGYLDQNIPMTLISKIITELNEACTTRVIEICLEKMSSP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PPVKFAWLAMGSQGRGEQMLHTDQDNAIVYENVNEVFRDETRIYFLKFAGLVNKGLFEIG
CCCEEEEEEECCCCCCCCCEECCCCCEEEECCHHHHHCCCCEEEEEEEHHHHHCCHHHHC
YDYCPADMMASSPKWCMSLDEWKNQVHHWITNPGKNEVLLSFIFFDYSMTYGDAETVDQL
CCCCCHHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCHHEEEEEEHHHHCCCCCHHHHHHH
SEYIFETIKANPIFYMHLVSGALQSPSPTGFFRQFLVEQDGANKDNFDIKRRALMPLTDA
HHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHH
ARVLILSHSVKSISNTAERFEKLAELEPNNRELYLSCSYSFKALLKFRTKQGLLHHDSGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCEECCCCC
FIELESLTKMEKIKLKRTFKTIKELQELISVRFNISNLV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014; 8522533 [H]