| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300083
Identifier: 146300083
GI number: 146300083
Start: 2796970
End: 2797533
Strand: Reverse
Name: 146300083
Synonym: Fjoh_2328
Alternate gene names: NA
Gene position: 2797533-2796970 (Counterclockwise)
Preceding gene: 146300084
Following gene: 146300082
Centisome position: 45.88
GC content: 32.8
Gene sequence:
>564_bases ATGAAATCTTTTTTCTTTCTATTCGCCGGGCTTTTCCTGTGCGTTTCTTCATTTGCACAATCTGCGGGAAATTACCAAGT TTATATTGATCGAATTAAACAGTTCTCAAAACCTGTGAGAGTTTTGCGCAACGATGTGGATGCTCAGGGAAATGGCTCTA TTGAATTTACAAATCAAAAAAATCAAATACTTCGTTTTAGATTGTCTGATAACAAACTTCAAAAAGGAGTATGCAGCATT GCTTTTGAAATCTATTATTATGAAAATAATTATTTAAGAAAAATTGAATCTCTTGACAGCAATGGAAATTTAATTGGCTG TAAACTAAAACTAAAAGAAGAAGCCGTAATAGAATTCACAATCGAAAAACCTGCTTTGTACTTAAAGAAAAAGAAACTAA TTGATGATGCCGAAGGAAATATCGAAATGAAAGATGATTCGAAAGAAAAAATTATTCGTGTTCGATATTTTGATGCTGCT AATAGACCAATAATGCAGTTACAGCCTGATTACATTTCAAGCAAATCGTACTGGGATTATACTATTCGAATGTCCTGGCC CTAG
Upstream 100 bases:
>100_bases GGAAATACAGTGAACTAACTGTTTACATTGAAAAAACCGAAGAAGAAATAGATTTACTGCAGAAATAAAAAATCTATTGA ACCAAACAACAATCTCATAA
Downstream 100 bases:
>100_bases ATAAGTTGTTAAGAAACTGCAATTCTAAGCTGCTAAAACTTGTGATGTTAAGTTTACAACAAAATGTTAGTTCGCTTTAA ATAAAATTGTGGCTTTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKSFFFLFAGLFLCVSSFAQSAGNYQVYIDRIKQFSKPVRVLRNDVDAQGNGSIEFTNQKNQILRFRLSDNKLQKGVCSI AFEIYYYENNYLRKIESLDSNGNLIGCKLKLKEEAVIEFTIEKPALYLKKKKLIDDAEGNIEMKDDSKEKIIRVRYFDAA NRPIMQLQPDYISSKSYWDYTIRMSWP
Sequences:
>Translated_187_residues MKSFFFLFAGLFLCVSSFAQSAGNYQVYIDRIKQFSKPVRVLRNDVDAQGNGSIEFTNQKNQILRFRLSDNKLQKGVCSI AFEIYYYENNYLRKIESLDSNGNLIGCKLKLKEEAVIEFTIEKPALYLKKKKLIDDAEGNIEMKDDSKEKIIRVRYFDAA NRPIMQLQPDYISSKSYWDYTIRMSWP >Mature_187_residues MKSFFFLFAGLFLCVSSFAQSAGNYQVYIDRIKQFSKPVRVLRNDVDAQGNGSIEFTNQKNQILRFRLSDNKLQKGVCSI AFEIYYYENNYLRKIESLDSNGNLIGCKLKLKEEAVIEFTIEKPALYLKKKKLIDDAEGNIEMKDDSKEKIIRVRYFDAA NRPIMQLQPDYISSKSYWDYTIRMSWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21896; Mature: 21896
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFFFLFAGLFLCVSSFAQSAGNYQVYIDRIKQFSKPVRVLRNDVDAQGNGSIEFTNQK CCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC NQILRFRLSDNKLQKGVCSIAFEIYYYENNYLRKIESLDSNGNLIGCKLKLKEEAVIEFT CEEEEEEECCCHHHHHHEEEEEEEEEEECCHHHHHHCCCCCCCEEEEEEEECCCEEEEEE IEKPALYLKKKKLIDDAEGNIEMKDDSKEKIIRVRYFDAANRPIMQLQPDYISSKSYWDY ECCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEE TIRMSWP EEEEECC >Mature Secondary Structure MKSFFFLFAGLFLCVSSFAQSAGNYQVYIDRIKQFSKPVRVLRNDVDAQGNGSIEFTNQK CCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC NQILRFRLSDNKLQKGVCSIAFEIYYYENNYLRKIESLDSNGNLIGCKLKLKEEAVIEFT CEEEEEEECCCHHHHHHEEEEEEEEEEECCHHHHHHCCCCCCCEEEEEEEECCCEEEEEE IEKPALYLKKKKLIDDAEGNIEMKDDSKEKIIRVRYFDAANRPIMQLQPDYISSKSYWDY ECCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEE TIRMSWP EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA