Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300084

Identifier: 146300084

GI number: 146300084

Start: 2797566

End: 2797982

Strand: Reverse

Name: 146300084

Synonym: Fjoh_2329

Alternate gene names: NA

Gene position: 2797982-2797566 (Counterclockwise)

Preceding gene: 146300085

Following gene: 146300083

Centisome position: 45.89

GC content: 35.97

Gene sequence:

>417_bases
ATGCAAAACGATCATCAGCCTCAAAAAAATTGGTGGGACAGAAACTGGAAATGGTTCGTTCCAACCGGATGTTTAGGTCT
TCTTACTCTTTTTGGCCTTTTCATTGCCGGAATATTTTTTGGCGTTACCTCAATGATGAAAGATTCTGATGCTTATAAAG
AATCTATAGCTGCCGCTCAAAACAATAAATTAGTGATTGAAAAACTAGGAAGTCCAATTGAAACTGACGGAATGGTTTCT
GGCAATATCAGCACGGCAAATAATAGTGGTAATTGCAATTTAGAAATTCCGCTCAAAGGTCCAAAAGGAAAAGGAACTTT
GTTTGTTACAGCAGAAAAAAGAGGAAAGTGGAAATACAGTGAACTAACTGTTTACATTGAAAAAACCGAAGAAGAAATAG
ATTTACTGCAGAAATAA

Upstream 100 bases:

>100_bases
ATTAAAATCTTTTTTTAGCAGGTAATTAAACTTCTAAGATTAAGAAGAATAATTGTATATTTCGGGCTTATAAAATTTTC
TAAACTAAGCCTTTTTAACT

Downstream 100 bases:

>100_bases
AAAATCTATTGAACCAAACAACAATCTCATAAATGAAATCTTTTTTCTTTCTATTCGCCGGGCTTTTCCTGTGCGTTTCT
TCATTTGCACAATCTGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQNNKLVIEKLGSPIETDGMVS
GNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYSELTVYIEKTEEEIDLLQK

Sequences:

>Translated_138_residues
MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQNNKLVIEKLGSPIETDGMVS
GNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYSELTVYIEKTEEEIDLLQK
>Mature_138_residues
MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQNNKLVIEKLGSPIETDGMVS
GNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYSELTVYIEKTEEEIDLLQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15476; Mature: 15476

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQ
CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
NNKLVIEKLGSPIETDGMVSGNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYS
CCEEEEECCCCCCCCCCEEECCEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEE
ELTVYIEKTEEEIDLLQK
EEEEEEECCHHHHHHHCC
>Mature Secondary Structure
MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQ
CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
NNKLVIEKLGSPIETDGMVSGNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYS
CCEEEEECCCCCCCCCCEEECCEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEE
ELTVYIEKTEEEIDLLQK
EEEEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA