| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300084
Identifier: 146300084
GI number: 146300084
Start: 2797566
End: 2797982
Strand: Reverse
Name: 146300084
Synonym: Fjoh_2329
Alternate gene names: NA
Gene position: 2797982-2797566 (Counterclockwise)
Preceding gene: 146300085
Following gene: 146300083
Centisome position: 45.89
GC content: 35.97
Gene sequence:
>417_bases ATGCAAAACGATCATCAGCCTCAAAAAAATTGGTGGGACAGAAACTGGAAATGGTTCGTTCCAACCGGATGTTTAGGTCT TCTTACTCTTTTTGGCCTTTTCATTGCCGGAATATTTTTTGGCGTTACCTCAATGATGAAAGATTCTGATGCTTATAAAG AATCTATAGCTGCCGCTCAAAACAATAAATTAGTGATTGAAAAACTAGGAAGTCCAATTGAAACTGACGGAATGGTTTCT GGCAATATCAGCACGGCAAATAATAGTGGTAATTGCAATTTAGAAATTCCGCTCAAAGGTCCAAAAGGAAAAGGAACTTT GTTTGTTACAGCAGAAAAAAGAGGAAAGTGGAAATACAGTGAACTAACTGTTTACATTGAAAAAACCGAAGAAGAAATAG ATTTACTGCAGAAATAA
Upstream 100 bases:
>100_bases ATTAAAATCTTTTTTTAGCAGGTAATTAAACTTCTAAGATTAAGAAGAATAATTGTATATTTCGGGCTTATAAAATTTTC TAAACTAAGCCTTTTTAACT
Downstream 100 bases:
>100_bases AAAATCTATTGAACCAAACAACAATCTCATAAATGAAATCTTTTTTCTTTCTATTCGCCGGGCTTTTCCTGTGCGTTTCT TCATTTGCACAATCTGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQNNKLVIEKLGSPIETDGMVS GNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYSELTVYIEKTEEEIDLLQK
Sequences:
>Translated_138_residues MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQNNKLVIEKLGSPIETDGMVS GNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYSELTVYIEKTEEEIDLLQK >Mature_138_residues MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQNNKLVIEKLGSPIETDGMVS GNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYSELTVYIEKTEEEIDLLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15476; Mature: 15476
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQ CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC NNKLVIEKLGSPIETDGMVSGNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYS CCEEEEECCCCCCCCCCEEECCEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEE ELTVYIEKTEEEIDLLQK EEEEEEECCHHHHHHHCC >Mature Secondary Structure MQNDHQPQKNWWDRNWKWFVPTGCLGLLTLFGLFIAGIFFGVTSMMKDSDAYKESIAAAQ CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC NNKLVIEKLGSPIETDGMVSGNISTANNSGNCNLEIPLKGPKGKGTLFVTAEKRGKWKYS CCEEEEECCCCCCCCCCEEECCEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEE ELTVYIEKTEEEIDLLQK EEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA