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The map label for this gene is traU [H]

Identifier: 146284622

GI number: 146284622

Start: 119244

End: 120248

Strand: Direct

Name: traU [H]

Synonym: Ent638_4296

Alternate gene names: 146284622

Gene position: 119244-120248 (Clockwise)

Preceding gene: 146284621

Following gene: 146284623

Centisome position: 75.59

GC content: 60.8

Gene sequence:

>1005_bases
ATGACCTTCAGAGCCTGTCTGACCGCCCTGTTACTGACCGTGTCGTGCTGGACGGCGTCGTTGTCTTCCGCCTCGGCTGC
GGCGAGTAATGCCGGCGAGGGGCGGTGGGTGAACCCGATATCGGACGTGTGCTGGAAATGTCTGTTCCCGATGTCGGTCG
GCAACGTCAAGCTGGCATCCGGCCCGCAGCCGGACACCAGTAACCCGTCAATGCCCATCCAGATTTGCTCCTATGGCGTC
TTTTACCGCATGGGGCTGGCCATCGGCTACTGGGAGCCGACGGCCATGACGGACGTGACCCGTGAACCCGGCGTGATGGT
GAACATGGGGGGCTTTAAGATTGATCTCGGGCGAACCGGAACCGGAACGGCCGGGCAGAGTGACCGGCCCGCAGCCGGCG
CGTTCTACCACGTCCACTGGTACAAATACCCGCTGATTTCCTGGCTCAGCATCATGACCAGTACCGGTTGTTTCCAGGGC
GGGGATATGGATATCGCCTACATGTCTGAAGTCGACCCGCTCTGGAATGACAGTACGCTGTCGATGATGATTAATCCGGA
GGCCGCGCTGTTCGGCAATCTGATTGCCCAGGCCGCCTGTGCAGCGGATGCGGTGGCCAGCACCGCCGGCGTGCCGCTGT
CCCCCCTGTTCTGGTGTGCCGGCAGTCAGGGCAGCATGTACCCGTTCACCGGCTTTACCAGCGGCGAGTTTTCTCCCCTG
GAATCGTCGCTTCTGGTCAGCGAGCGCATGGCGTTCAAGCTGCACCGCGAAGGTCTGGTGATGAACACGGTCGGGGCGGA
TTATGCGGTCTGCTATCAGTATCCGTCTCCGATCGTGCCGAAAGAACGGTGGCGCTATCAGATGGTGAACATGTTCCCCG
AAACCAACAGCTGCCATGCCTTCGGGGCCAGTACCCAGACGTGGGGCACGCCCCACAACTCCCCGCAGTCGAAGAAAAAC
TTTGGCTATCTGCTCTGGCGCAAACGTAACTGCGTCTATTCGTGA

Upstream 100 bases:

>100_bases
ATGAGTGGCAGCCCTCCGCGCCGGCGGGTGACGGCTGGTTTATTGGCTCCATCCATGACTCGGAAGACGGACCGCTTTGC
GTCTGGCTGCGGGAGGCACA

Downstream 100 bases:

>100_bases
GGTCCGGTCATGCATAACACACTCTTTCGGGCGCTGCTCCTCAGCGTCCTTTTTGGCGGCGCTCAGACGGTACTGGCCAG
CGAACAGGCCAGCGTGTCTG

Product: conjugal transfer pilus assembly protein TraU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MTFRACLTALLLTVSCWTASLSSASAAASNAGEGRWVNPISDVCWKCLFPMSVGNVKLASGPQPDTSNPSMPIQICSYGV
FYRMGLAIGYWEPTAMTDVTREPGVMVNMGGFKIDLGRTGTGTAGQSDRPAAGAFYHVHWYKYPLISWLSIMTSTGCFQG
GDMDIAYMSEVDPLWNDSTLSMMINPEAALFGNLIAQAACAADAVASTAGVPLSPLFWCAGSQGSMYPFTGFTSGEFSPL
ESSLLVSERMAFKLHREGLVMNTVGADYAVCYQYPSPIVPKERWRYQMVNMFPETNSCHAFGASTQTWGTPHNSPQSKKN
FGYLLWRKRNCVYS

Sequences:

>Translated_334_residues
MTFRACLTALLLTVSCWTASLSSASAAASNAGEGRWVNPISDVCWKCLFPMSVGNVKLASGPQPDTSNPSMPIQICSYGV
FYRMGLAIGYWEPTAMTDVTREPGVMVNMGGFKIDLGRTGTGTAGQSDRPAAGAFYHVHWYKYPLISWLSIMTSTGCFQG
GDMDIAYMSEVDPLWNDSTLSMMINPEAALFGNLIAQAACAADAVASTAGVPLSPLFWCAGSQGSMYPFTGFTSGEFSPL
ESSLLVSERMAFKLHREGLVMNTVGADYAVCYQYPSPIVPKERWRYQMVNMFPETNSCHAFGASTQTWGTPHNSPQSKKN
FGYLLWRKRNCVYS
>Mature_333_residues
TFRACLTALLLTVSCWTASLSSASAAASNAGEGRWVNPISDVCWKCLFPMSVGNVKLASGPQPDTSNPSMPIQICSYGVF
YRMGLAIGYWEPTAMTDVTREPGVMVNMGGFKIDLGRTGTGTAGQSDRPAAGAFYHVHWYKYPLISWLSIMTSTGCFQGG
DMDIAYMSEVDPLWNDSTLSMMINPEAALFGNLIAQAACAADAVASTAGVPLSPLFWCAGSQGSMYPFTGFTSGEFSPLE
SSLLVSERMAFKLHREGLVMNTVGADYAVCYQYPSPIVPKERWRYQMVNMFPETNSCHAFGASTQTWGTPHNSPQSKKNF
GYLLWRKRNCVYS

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 36396; Mature: 36265

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRACLTALLLTVSCWTASLSSASAAASNAGEGRWVNPISDVCWKCLFPMSVGNVKLAS
CCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECC
GPQPDTSNPSMPIQICSYGVFYRMGLAIGYWEPTAMTDVTREPGVMVNMGGFKIDLGRTG
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHCCCCCCCCEEEECCCEEEECCCCC
TGTAGQSDRPAAGAFYHVHWYKYPLISWLSIMTSTGCFQGGDMDIAYMSEVDPLWNDSTL
CCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEE
SMMINPEAALFGNLIAQAACAADAVASTAGVPLSPLFWCAGSQGSMYPFTGFTSGEFSPL
EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCCCCCCC
ESSLLVSERMAFKLHREGLVMNTVGADYAVCYQYPSPIVPKERWRYQMVNMFPETNSCHA
HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEE
FGASTQTWGTPHNSPQSKKNFGYLLWRKRNCVYS
ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
TFRACLTALLLTVSCWTASLSSASAAASNAGEGRWVNPISDVCWKCLFPMSVGNVKLAS
CHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECC
GPQPDTSNPSMPIQICSYGVFYRMGLAIGYWEPTAMTDVTREPGVMVNMGGFKIDLGRTG
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHCCCCCCCCEEEECCCEEEECCCCC
TGTAGQSDRPAAGAFYHVHWYKYPLISWLSIMTSTGCFQGGDMDIAYMSEVDPLWNDSTL
CCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEE
SMMINPEAALFGNLIAQAACAADAVASTAGVPLSPLFWCAGSQGSMYPFTGFTSGEFSPL
EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCCCCCCC
ESSLLVSERMAFKLHREGLVMNTVGADYAVCYQYPSPIVPKERWRYQMVNMFPETNSCHA
HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEE
FGASTQTWGTPHNSPQSKKNFGYLLWRKRNCVYS
ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]