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The map label for this gene is trbC [H]

Identifier: 146284623

GI number: 146284623

Start: 120258

End: 120878

Strand: Direct

Name: trbC [H]

Synonym: Ent638_4297

Alternate gene names: 146284623

Gene position: 120258-120878 (Clockwise)

Preceding gene: 146284622

Following gene: 146284624

Centisome position: 76.23

GC content: 60.55

Gene sequence:

>621_bases
ATGCATAACACACTCTTTCGGGCGCTGCTCCTCAGCGTCCTTTTTGGCGGCGCTCAGACGGTACTGGCCAGCGAACAGGC
CAGCGTGTCTGCCAGTGATATGGCCTGGATGAAACAGCAACAGCAGCCACTTGACAGTCTTAAACAGCGCCTGCAGGGGC
AGACAATGTCGCTGCCAGCAGAGCAGCAGGCGCTTATCAGTCGTCTGCAGGGTGATCTCGCGCGGCAGCAGGCTGAGCGC
GAGAGCGGTGAAAAACGCACCTTTCCCGCCATGTACTTTGTCAGCCTGGGACTGCCGCGCGAGGGGTTGCTTCCGATGCT
GAAGGAAGCAAACCGATACGGTGTGCCGGCGACGCTGCGCGGGCTGGTCAACAACGACCTGCGTCAGACGGCATCAGCCA
TGTTTGAGCTGGCGAAAGAGGACAAGAATATCGGGGTGCAAATCGACCCCACGCTGTACACCGAGTACCACATCACGACC
ATCCCGGCCCTGGTGGTGACCTGCCCGGGTCGCTTTGATGTCATTCGTGGCAGCCTCCCGCTGAAGCAGGCGCTGGAGAA
AGTGGCCGAGAGCGGGGACTGCGCCGCAACGGCGAAACAGATACTGGAGGACGGGAAATGA

Upstream 100 bases:

>100_bases
CCAGACGTGGGGCACGCCCCACAACTCCCCGCAGTCGAAGAAAAACTTTGGCTATCTGCTCTGGCGCAAACGTAACTGCG
TCTATTCGTGAGGTCCGGTC

Downstream 100 bases:

>100_bases
AACGACTGATTCTGGCGGCGCTGCTGATGACGCCCTGTGTTGTGTTGTCCGCTGACCCGGCTTTTGAGGCGGGGGCAAGC
TTCGGAAAAGGCAATGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MHNTLFRALLLSVLFGGAQTVLASEQASVSASDMAWMKQQQQPLDSLKQRLQGQTMSLPAEQQALISRLQGDLARQQAER
ESGEKRTFPAMYFVSLGLPREGLLPMLKEANRYGVPATLRGLVNNDLRQTASAMFELAKEDKNIGVQIDPTLYTEYHITT
IPALVVTCPGRFDVIRGSLPLKQALEKVAESGDCAATAKQILEDGK

Sequences:

>Translated_206_residues
MHNTLFRALLLSVLFGGAQTVLASEQASVSASDMAWMKQQQQPLDSLKQRLQGQTMSLPAEQQALISRLQGDLARQQAER
ESGEKRTFPAMYFVSLGLPREGLLPMLKEANRYGVPATLRGLVNNDLRQTASAMFELAKEDKNIGVQIDPTLYTEYHITT
IPALVVTCPGRFDVIRGSLPLKQALEKVAESGDCAATAKQILEDGK
>Mature_206_residues
MHNTLFRALLLSVLFGGAQTVLASEQASVSASDMAWMKQQQQPLDSLKQRLQGQTMSLPAEQQALISRLQGDLARQQAER
ESGEKRTFPAMYFVSLGLPREGLLPMLKEANRYGVPATLRGLVNNDLRQTASAMFELAKEDKNIGVQIDPTLYTEYHITT
IPALVVTCPGRFDVIRGSLPLKQALEKVAESGDCAATAKQILEDGK

Specific function: Essential for F plasmid conjugative transfer, participates in F-pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019106
- InterPro:   IPR014113 [H]

Pfam domain/function: PF09673 TrbC_Ftype [H]

EC number: NA

Molecular weight: Translated: 22616; Mature: 22616

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNTLFRALLLSVLFGGAQTVLASEQASVSASDMAWMKQQQQPLDSLKQRLQGQTMSLPA
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCH
EQQALISRLQGDLARQQAERESGEKRTFPAMYFVSLGLPREGLLPMLKEANRYGVPATLR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHH
GLVNNDLRQTASAMFELAKEDKNIGVQIDPTLYTEYHITTIPALVVTCPGRFDVIRGSLP
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHHHHHHHHCCCCCHHHHCCCCC
LKQALEKVAESGDCAATAKQILEDGK
HHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MHNTLFRALLLSVLFGGAQTVLASEQASVSASDMAWMKQQQQPLDSLKQRLQGQTMSLPA
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCH
EQQALISRLQGDLARQQAERESGEKRTFPAMYFVSLGLPREGLLPMLKEANRYGVPATLR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHH
GLVNNDLRQTASAMFELAKEDKNIGVQIDPTLYTEYHITTIPALVVTCPGRFDVIRGSLP
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHHHHHHHHCCCCCHHHHCCCCC
LKQALEKVAESGDCAATAKQILEDGK
HHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2050638; 7915817; 2198250; 1593622 [H]