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The map label for this gene is resD [H]

Identifier: 145301497

GI number: 145301497

Start: 111419

End: 112189

Strand: Direct

Name: resD [H]

Synonym: ASA_P5G118

Alternate gene names: 145301497

Gene position: 111419-112189 (Clockwise)

Preceding gene: 145301495

Following gene: 145301498

Centisome position: 71.84

GC content: 66.28

Gene sequence:

>771_bases
ATGCAGATCACCCCGCTGGCTCATCACACAGGCCATGGCCACCCCCTCGGCAACGCTCTCCAGGGCACCCCGCTGGTGCG
CCCCGCTGGCAACCCCGAGCAGTGGCGGGTGGCCACGGCACTCAGAAACTTGGCCATCGCTCACACGGACGCACCCCGTT
ATCTCCTCGCCCACGAAGTCGGCGCGGTGCTGGCCATGCTGCCGGATCTGCAGCGCCGCGTGCTGATCGCCACCCTGTGG
AATACCGGTGCCCGTATCAATGAAGCCCTGGCGCTGACCCCTGGCGACTTCGAGCTCGATGGGGGGAGGCCGTTCGTGGT
GCTACGTACCCTCAAACAGCGCAGCCGGGGCAAGGGACGGCCCCGCGCTGGCGATGCGGTCAAGCGGCTGGTGCCGCTGC
TCGATCCGGTGTTCGCCCAGCTGGCCCGCGAGTACCTGGCCACCGTCAAGCTGGCGCGGGGTGCCCGGATCTGGCCGGTC
ACCGATCAGACGGTGAGGAACTGGCTGAAAGAGGCCGACACGGCGCTGCGGGGGCGGGGGGTTCACCTGGTGGTGCCGCT
GACACCCCATGTGTTCAGGCACGCTTTTGCGATGCATCTCCTGCTCCAGGGAAATCTGCACATCAAGCGGCTGCAGGCCT
ATCTGGGGCATCGATCGCTCAAATCGACCGAGGTCTATACCCAGGTGCTGGCGCTGGATGCGGCGGCCAGCGAGATAGGG
TTGAGCTTTTCGGTCGCCAATGAGGGCAATCCGCTGTTACTGGGACGTTGA

Upstream 100 bases:

>100_bases
CAAGACCACCCCGCGCCAGCACGGATTTATTGGCCCTGACAGCCGCCCCCGGGATCTGGCATCCTGCCGATCACCGACTC
ACCCCACGACAAGGATCCCG

Downstream 100 bases:

>100_bases
GTTGACGCCGGTCGGCGCAGGCGACAGGATAGGGGACACAAACAGCCCTCGTGCCAGCGGCGCGGGCGCGTTTATCAAAA
TCTATTTATGAACAATCATT

Product: resolvase

Products: NA

Alternate protein names: Protein D [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MQITPLAHHTGHGHPLGNALQGTPLVRPAGNPEQWRVATALRNLAIAHTDAPRYLLAHEVGAVLAMLPDLQRRVLIATLW
NTGARINEALALTPGDFELDGGRPFVVLRTLKQRSRGKGRPRAGDAVKRLVPLLDPVFAQLAREYLATVKLARGARIWPV
TDQTVRNWLKEADTALRGRGVHLVVPLTPHVFRHAFAMHLLLQGNLHIKRLQAYLGHRSLKSTEVYTQVLALDAAASEIG
LSFSVANEGNPLLLGR

Sequences:

>Translated_256_residues
MQITPLAHHTGHGHPLGNALQGTPLVRPAGNPEQWRVATALRNLAIAHTDAPRYLLAHEVGAVLAMLPDLQRRVLIATLW
NTGARINEALALTPGDFELDGGRPFVVLRTLKQRSRGKGRPRAGDAVKRLVPLLDPVFAQLAREYLATVKLARGARIWPV
TDQTVRNWLKEADTALRGRGVHLVVPLTPHVFRHAFAMHLLLQGNLHIKRLQAYLGHRSLKSTEVYTQVLALDAAASEIG
LSFSVANEGNPLLLGR
>Mature_256_residues
MQITPLAHHTGHGHPLGNALQGTPLVRPAGNPEQWRVATALRNLAIAHTDAPRYLLAHEVGAVLAMLPDLQRRVLIATLW
NTGARINEALALTPGDFELDGGRPFVVLRTLKQRSRGKGRPRAGDAVKRLVPLLDPVFAQLAREYLATVKLARGARIWPV
TDQTVRNWLKEADTALRGRGVHLVVPLTPHVFRHAFAMHLLLQGNLHIKRLQAYLGHRSLKSTEVYTQVLALDAAASEIG
LSFSVANEGNPLLLGR

Specific function: Acts as a repressor of transcription and as a site- specific resolvase that cleaves at the rfsF site [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR016423 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 28071; Mature: 28071

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQITPLAHHTGHGHPLGNALQGTPLVRPAGNPEQWRVATALRNLAIAHTDAPRYLLAHEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHH
GAVLAMLPDLQRRVLIATLWNTGARINEALALTPGDFELDGGRPFVVLRTLKQRSRGKGR
HHHHHHHHHHHHHEEEEEHHCCCCCCCCEEEECCCCEEECCCCCEEEHHHHHHHHCCCCC
PRAGDAVKRLVPLLDPVFAQLAREYLATVKLARGARIWPVTDQTVRNWLKEADTALRGRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCC
VHLVVPLTPHVFRHAFAMHLLLQGNLHIKRLQAYLGHRSLKSTEVYTQVLALDAAASEIG
CEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
LSFSVANEGNPLLLGR
CEEEECCCCCEEEECC
>Mature Secondary Structure
MQITPLAHHTGHGHPLGNALQGTPLVRPAGNPEQWRVATALRNLAIAHTDAPRYLLAHEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHH
GAVLAMLPDLQRRVLIATLWNTGARINEALALTPGDFELDGGRPFVVLRTLKQRSRGKGR
HHHHHHHHHHHHHEEEEEHHCCCCCCCCEEEECCCCEEECCCCCEEEHHHHHHHHCCCCC
PRAGDAVKRLVPLLDPVFAQLAREYLATVKLARGARIWPVTDQTVRNWLKEADTALRGRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCC
VHLVVPLTPHVFRHAFAMHLLLQGNLHIKRLQAYLGHRSLKSTEVYTQVLALDAAASEIG
CEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
LSFSVANEGNPLLLGR
CEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027661; 3007930; 6327993 [H]