Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is parA [C]
Identifier: 145301498
GI number: 145301498
Start: 113566
End: 114378
Strand: Direct
Name: parA [C]
Synonym: ASA_P5G120
Alternate gene names: 145301498
Gene position: 113566-114378 (Clockwise)
Preceding gene: 145301497
Following gene: 145301499
Centisome position: 73.22
GC content: 48.95
Gene sequence:
>813_bases ATGACAACGACAATTGGAGTGATAAACCAAAAAGGAGGCGTGGGTAAAACCACCACAGTCATCAATCTCTCATCACGGTT TGCAGAGCTTGGCAAGCGCGTGCTGGTGTTTGATTTGGATCCACAAAGCAATTTGAGCACTGTGCTATCCGGTGGAAAAT ACGATTTCGATCTGACGGTCACGGACTTGTTCGACAAGCCCAAACGGATTGATATCAATGCCACCATTATTCCATGCATG GCCAACGGTGAGATCATTCCCAATCTTTACCTGGTACCGGCTGACATCAGCCTGTCACGGATCATCGAGCAGAGCCTGAC CCAAATACACCGCGAACGGATCTTGATGCGTCACCTGGAGAAGCTGCAGGGCCAATTTGACATCATCCTCCTGGATTGCC CGCCCAACCTGAGCTTAACCAGTACCAATGCCATGATGGCCGCCGATATGTTTTTGATCCCCGTCGATGGTGGTTCCTTT AGCCTCAACGGTCTTGCCGACCTTCTGGATGCTTTGGAAGAGGTAAAGGAGACTGAGCATGTTCCTTATTTCGCCTTTAG AAATGAACGAGCCAAACAAAACAAATTGATCAACGACTTTCTGGATGAACAGTTGGCAGCCCTGAACGATCGGGTTGGCA AGGAGGGGCCTGGAGGCGTCCTTGAATCCTGTGTCAGACGGGAGGAATCCATCGGTCAAGCCAGTGTCACAAGTGTGCCA CTCCGTTTTTATCGTCCAGGCGCACTTGCAGTTATGGATTATAAAAACCTTGCCACAGAAGTGTTGCAGAAGATTAATGA ATTACAAAGGTAA
Upstream 100 bases:
>100_bases TGAAAATGTATTTCAAATGTAATACACCGACCCCTTGCAACCGCCATCCAAATGTATTACATTTGAAATACATCCAACTA TGTAGCAAGGTGACTGAAAC
Downstream 100 bases:
>100_bases TACAAATGTCAAAACTGGAAGGTAGTTCGGCCCTTACTCGGCGCAAAGAAAAATCACGGTTAGACAAGATAACCACTGTC GGCAGCAGACGCAATGTCAC
Product: ParA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTTTIGVINQKGGVGKTTTVINLSSRFAELGKRVLVFDLDPQSNLSTVLSGGKYDFDLTVTDLFDKPKRIDINATIIPCM ANGEIIPNLYLVPADISLSRIIEQSLTQIHRERILMRHLEKLQGQFDIILLDCPPNLSLTSTNAMMAADMFLIPVDGGSF SLNGLADLLDALEEVKETEHVPYFAFRNERAKQNKLINDFLDEQLAALNDRVGKEGPGGVLESCVRREESIGQASVTSVP LRFYRPGALAVMDYKNLATEVLQKINELQR
Sequences:
>Translated_270_residues MTTTIGVINQKGGVGKTTTVINLSSRFAELGKRVLVFDLDPQSNLSTVLSGGKYDFDLTVTDLFDKPKRIDINATIIPCM ANGEIIPNLYLVPADISLSRIIEQSLTQIHRERILMRHLEKLQGQFDIILLDCPPNLSLTSTNAMMAADMFLIPVDGGSF SLNGLADLLDALEEVKETEHVPYFAFRNERAKQNKLINDFLDEQLAALNDRVGKEGPGGVLESCVRREESIGQASVTSVP LRFYRPGALAVMDYKNLATEVLQKINELQR >Mature_269_residues TTTIGVINQKGGVGKTTTVINLSSRFAELGKRVLVFDLDPQSNLSTVLSGGKYDFDLTVTDLFDKPKRIDINATIIPCMA NGEIIPNLYLVPADISLSRIIEQSLTQIHRERILMRHLEKLQGQFDIILLDCPPNLSLTSTNAMMAADMFLIPVDGGSFS LNGLADLLDALEEVKETEHVPYFAFRNERAKQNKLINDFLDEQLAALNDRVGKEGPGGVLESCVRREESIGQASVTSVPL RFYRPGALAVMDYKNLATEVLQKINELQR
Specific function: May play a role in septum formation [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29909; Mature: 29778
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTIGVINQKGGVGKTTTVINLSSRFAELGKRVLVFDLDPQSNLSTVLSGGKYDFDLTV CCCEEEEEECCCCCCCEEEEEEHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCEEEEEEE TDLFDKPKRIDINATIIPCMANGEIIPNLYLVPADISLSRIIEQSLTQIHRERILMRHLE HHHCCCCCEEEECEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH KLQGQFDIILLDCPPNLSLTSTNAMMAADMFLIPVDGGSFSLNGLADLLDALEEVKETEH HHCCCEEEEEEECCCCCEEECCCCEEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCC VPYFAFRNERAKQNKLINDFLDEQLAALNDRVGKEGPGGVLESCVRREESIGQASVTSVP CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHCC LRFYRPGALAVMDYKNLATEVLQKINELQR CEEECCCEEEEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTTIGVINQKGGVGKTTTVINLSSRFAELGKRVLVFDLDPQSNLSTVLSGGKYDFDLTV CCEEEEEECCCCCCCEEEEEEHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCEEEEEEE TDLFDKPKRIDINATIIPCMANGEIIPNLYLVPADISLSRIIEQSLTQIHRERILMRHLE HHHCCCCCEEEECEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH KLQGQFDIILLDCPPNLSLTSTNAMMAADMFLIPVDGGSFSLNGLADLLDALEEVKETEH HHCCCEEEEEEECCCCCEEECCCCEEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCC VPYFAFRNERAKQNKLINDFLDEQLAALNDRVGKEGPGGVLESCVRREESIGQASVTSVP CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHCC LRFYRPGALAVMDYKNLATEVLQKINELQR CEEECCCEEEEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]