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The map label for this gene is trbI [H]

Identifier: 145301415

GI number: 145301415

Start: 28978

End: 29415

Strand: Direct

Name: trbI [H]

Synonym: ASA_P5G031

Alternate gene names: 145301415

Gene position: 28978-29415 (Clockwise)

Preceding gene: 145301414

Following gene: 145301416

Centisome position: 18.68

GC content: 65.53

Gene sequence:

>438_bases
ATGGCACCATTAATTCCCCCGCCGCCCACGGACAACGCCCCCGCAACCAGCGCCCCCCGCCGCACAGGCAGGGGATGGAT
GCTGGCACTGGCGGTGCTGACCGCCCTCAACCTGGCTGCAACCGGCTGGCTGGCCCTGCACCGTACGCCAACCCCGGTGG
CCTTTGATATGAAGGGCACCATCGATCAGTTCATGGAGCAATCGGCCAGCCAGTCCCTGACCGAAGCGCAAAGCAAGCAA
CTGGTTGCCCGCTTTACCCAGGCGCTAGATGCCAGCCTCTCCGTCTGGCAGCAGGAGCACCGGGCGCTCATCCTGGTTTC
CCCCTCGGTGGTACGGGGGGCCGATGACATTACCCGCACTATCCAGCACGACATCGCCACCCGGATGCGAGCGCAGCTTG
CCCAGCCAGCCACCACCTGGCATGAGGAGGCGCAATGA

Upstream 100 bases:

>100_bases
AGTTTCTGCAACAGCGCCGAGCCGAAGGCGTCGACATTCACGACGCGGTCTATGAGCTGGCACTGCTGCGCTTTCCCGAC
GAGATGGAGGCCCTTGCATC

Downstream 100 bases:

>100_bases
GGGCCGCCTGCGTGTACATCGCCCTGGCCCTCGGTGGTCAGGCCCATGCTGCCAATCTGGGCACCTGGGGCGATCTCTAC
CCCATCACCGAGCCGGATAT

Product: conjugative transfer protein TrbI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAPLIPPPPTDNAPATSAPRRTGRGWMLALAVLTALNLAATGWLALHRTPTPVAFDMKGTIDQFMEQSASQSLTEAQSKQ
LVARFTQALDASLSVWQQEHRALILVSPSVVRGADDITRTIQHDIATRMRAQLAQPATTWHEEAQ

Sequences:

>Translated_145_residues
MAPLIPPPPTDNAPATSAPRRTGRGWMLALAVLTALNLAATGWLALHRTPTPVAFDMKGTIDQFMEQSASQSLTEAQSKQ
LVARFTQALDASLSVWQQEHRALILVSPSVVRGADDITRTIQHDIATRMRAQLAQPATTWHEEAQ
>Mature_144_residues
APLIPPPPTDNAPATSAPRRTGRGWMLALAVLTALNLAATGWLALHRTPTPVAFDMKGTIDQFMEQSASQSLTEAQSKQL
VARFTQALDASLSVWQQEHRALILVSPSVVRGADDITRTIQHDIATRMRAQLAQPATTWHEEAQ

Specific function: May influence the kinetics of pilus outgrowth and/or retraction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014115 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15803; Mature: 15672

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLIPPPPTDNAPATSAPRRTGRGWMLALAVLTALNLAATGWLALHRTPTPVAFDMKGT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCHH
IDQFMEQSASQSLTEAQSKQLVARFTQALDASLSVWQQEHRALILVSPSVVRGADDITRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHCHHHHHHH
IQHDIATRMRAQLAQPATTWHEEAQ
HHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
APLIPPPPTDNAPATSAPRRTGRGWMLALAVLTALNLAATGWLALHRTPTPVAFDMKGT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCHH
IDQFMEQSASQSLTEAQSKQLVARFTQALDASLSVWQQEHRALILVSPSVVRGADDITRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHCHHHHHHH
IQHDIATRMRAQLAQPATTWHEEAQ
HHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1355084; 7915817; 2265751 [H]