| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300079
Identifier: 145300079
GI number: 145300079
Start: 3440276
End: 3442546
Strand: Direct
Name: 145300079
Synonym: ASA_3179
Alternate gene names: NA
Gene position: 3440276-3442546 (Clockwise)
Preceding gene: 145300078
Following gene: 145300080
Centisome position: 73.16
GC content: 58.65
Gene sequence:
>2271_bases ATGAATCAACTGTTTTTTCTGGCAATGATGATGTCCTCCCTGTCGGCTCCTGATCTGGATCTGGCCAAGGAGCAATTGTC TATCGATCTGCAGCAGGCCCAAACCCTGGTACTGACCGATCCTGCCAGATGTGTCCAGATCACCTCTGCCTTCCTGACAC GCACAGCCAATAATCCCAAGCAAATCATCAGCAATCGCCAGGAGTATGGCTATCGCGAGCCATTGCTAAGCTATGGCACA GCAGCCCAGGCCACAGGCGCCCACCTGCTCAAGGGGGAATGCCTGCTGCAACTTGGCCAGTTCCAGGCGGCCCAGAAGGC GCTTGATCAAGGCATTGCCATGGCCACCAAAGAGCAGCAGCTGGAGTTGCAGGCCCACGGCCTCTATCTGAAGATCCGCA GCCAGAATCTGCAGGAGCACTCCCATGGCGCCAGCGCCACTCTGCTCGGCCAACTCGAGACCCTGCTCAGCACCCCCAGC CTCAAAGAGAGCCAGTTGCAGGTATACAGCCGCTTGCTGCGCACCAACGCCAGCATAGAGGCGCACCAGTTTGACGAGGC CAAACGCCAGCTGGCAGAGGCACGGCGCTGGGCAGATCAGGCCAAGAACCCGCTGGCCAGCGCCTGGGTCAGCGCTGTGA GCGGCGATCTCTACCATGCCCTCCAGCAGCCCCAGCTCTCTCTTGGTGACTACATAGATGCCCAGCAACAGGCGAGAGGA CTGCAGGATCCCCTCTTCCTCGGTCTGCTGTCGAACCAGATAGTGAACCTCTATCAGGCGGAGCAGGAACCACAGAAGGC ACTGCAATATGCCAATGAGGCCGCCAACTACTTCCATGCCCTCGGCAACCCCTCCCTGCTCAGCGATGCACTGATCGTGC TGGCCCGCCTCAACCGGGATCAGGGCGAGATGAACATGGCGCTGGTCTACTTCTTCAATGCGCTGGATCTGCTGGACGAG GGCAATAACCGCACCCGCATCGCCAATCTCAAGTACGAGATAGGCAAAACCTATCTGCAGACCGGCAATCTGACCCTGGC CCGCAACTACCTCACGGCGGCCCGCCAGTCCCACGAACTGGGGGACGACAAGGAGCCGCTGATCGACACCCTGCTGTTGC TGGGTGAGCTGCACCTCAAGCAGAAGGAGGCGGGCATCGCCATCCTTCAGCTGGAAAATGCGCTGGCGCTGGCCAACCAG ATTGGCGACGCCCAGCGCCAGTTCGAGATCTTCCGTCTGCTCTCGGTGGCCTACGAGCAGAAGGGCTACCTCAAGCAGGC GCTGGACAGCTACAAGAATTTCCACCAGCGCAGCGAGCAGGTACGCCAGCAGCAGGTCGATCTGGAGCAGGAGGCGATCC GCGACAACTATGTCCAGGTGGAGCGGGAACAGCAGATCAAGGAGCTGGAACAACAACTGGATATCAGCCAGCATCAGCAG GATCGCTACCTCTGGTCGAGCGTGATCACTGGCCTGCTGCTGACCCTGTTCATCTATCTGTTTTTCACCCTCTGGCTCAA GCTCAGGGTCGCACGCCTGCAGGGCAAACAACTGGGTGAGGCCATCTTGATCGAGCCACGCACCGGCCTTGCCAACTGGC AGCGGCTGATGAGCCGCTGGCCGCGGGAGATGGCAAGACGCCAGCAAAAATCAGAACGCTGGTATCTGAGCGAACGGCCC ACCAGCGAATTTGACGACAAGTTGCATTACCTGCTGTTTCGGGTGCCCTTCCTAGTGAACTGCCTGGAGCAGCACGGCTA TCAGGTGAGCCGCGAGATAGAGCAGGCTTTCGGCGCCTATATCAAGGAGCTGACACCGCAGGATGGCCGCATCTATGATT TACGCGAAGGCCATCTGCTCTACGTGGTGCCCCAGCGCCACGTGGAGGACCTGCACAAGCTGGCTCAGGATCTGCTCGCG GCCTTTGCCGCTTTCCCCTGCCAGCACTCGCTGGATCGCCATATCAGCCTCGGCATCGTCAGCCACCCCTTCCTGCCCAA GGCGGCGACCGCCCTCGATCACAACGGCCTGTTCGACCTCTGCTATCTGGCACTGGCCGGAGCCATTCAGCTCAGCGAAA AATATCAGCAAAGCGTCTGGCTGGAACTTGCCGCCATCGATTGCCAACAGGCCGCATTTTTTAATGGGGATGTGTGGCAA TGCTGCTTGATGGCAATTGACAAGGGACTGGTAAAAGTAAATTCTTCTCATGAAAAGCAATGGGTTAATTGGCTTCGACT TTCACGGACGAAAGCACCGGATAACCAATAA
Upstream 100 bases:
>100_bases GACAGAGAAGGCCCCTGGATATCGTATCTGTCAGTAAACTCTGGACGTGCAGGGGGGGGCTTGGATAACATGCCCACACC CCTGTGCTGTCCTTAATCCA
Downstream 100 bases:
>100_bases CCCTATAGATAATCAACTGGATCTGGAACTGGGTTCGACCGCCGTTGCTATCCAACACAAAAACGATAATGACAACAGGG CGACCTGAATAATGAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: TPR-Repeat-Containing Protein
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MNQLFFLAMMMSSLSAPDLDLAKEQLSIDLQQAQTLVLTDPARCVQITSAFLTRTANNPKQIISNRQEYGYREPLLSYGT AAQATGAHLLKGECLLQLGQFQAAQKALDQGIAMATKEQQLELQAHGLYLKIRSQNLQEHSHGASATLLGQLETLLSTPS LKESQLQVYSRLLRTNASIEAHQFDEAKRQLAEARRWADQAKNPLASAWVSAVSGDLYHALQQPQLSLGDYIDAQQQARG LQDPLFLGLLSNQIVNLYQAEQEPQKALQYANEAANYFHALGNPSLLSDALIVLARLNRDQGEMNMALVYFFNALDLLDE GNNRTRIANLKYEIGKTYLQTGNLTLARNYLTAARQSHELGDDKEPLIDTLLLLGELHLKQKEAGIAILQLENALALANQ IGDAQRQFEIFRLLSVAYEQKGYLKQALDSYKNFHQRSEQVRQQQVDLEQEAIRDNYVQVEREQQIKELEQQLDISQHQQ DRYLWSSVITGLLLTLFIYLFFTLWLKLRVARLQGKQLGEAILIEPRTGLANWQRLMSRWPREMARRQQKSERWYLSERP TSEFDDKLHYLLFRVPFLVNCLEQHGYQVSREIEQAFGAYIKELTPQDGRIYDLREGHLLYVVPQRHVEDLHKLAQDLLA AFAAFPCQHSLDRHISLGIVSHPFLPKAATALDHNGLFDLCYLALAGAIQLSEKYQQSVWLELAAIDCQQAAFFNGDVWQ CCLMAIDKGLVKVNSSHEKQWVNWLRLSRTKAPDNQ
Sequences:
>Translated_756_residues MNQLFFLAMMMSSLSAPDLDLAKEQLSIDLQQAQTLVLTDPARCVQITSAFLTRTANNPKQIISNRQEYGYREPLLSYGT AAQATGAHLLKGECLLQLGQFQAAQKALDQGIAMATKEQQLELQAHGLYLKIRSQNLQEHSHGASATLLGQLETLLSTPS LKESQLQVYSRLLRTNASIEAHQFDEAKRQLAEARRWADQAKNPLASAWVSAVSGDLYHALQQPQLSLGDYIDAQQQARG LQDPLFLGLLSNQIVNLYQAEQEPQKALQYANEAANYFHALGNPSLLSDALIVLARLNRDQGEMNMALVYFFNALDLLDE GNNRTRIANLKYEIGKTYLQTGNLTLARNYLTAARQSHELGDDKEPLIDTLLLLGELHLKQKEAGIAILQLENALALANQ IGDAQRQFEIFRLLSVAYEQKGYLKQALDSYKNFHQRSEQVRQQQVDLEQEAIRDNYVQVEREQQIKELEQQLDISQHQQ DRYLWSSVITGLLLTLFIYLFFTLWLKLRVARLQGKQLGEAILIEPRTGLANWQRLMSRWPREMARRQQKSERWYLSERP TSEFDDKLHYLLFRVPFLVNCLEQHGYQVSREIEQAFGAYIKELTPQDGRIYDLREGHLLYVVPQRHVEDLHKLAQDLLA AFAAFPCQHSLDRHISLGIVSHPFLPKAATALDHNGLFDLCYLALAGAIQLSEKYQQSVWLELAAIDCQQAAFFNGDVWQ CCLMAIDKGLVKVNSSHEKQWVNWLRLSRTKAPDNQ >Mature_756_residues MNQLFFLAMMMSSLSAPDLDLAKEQLSIDLQQAQTLVLTDPARCVQITSAFLTRTANNPKQIISNRQEYGYREPLLSYGT AAQATGAHLLKGECLLQLGQFQAAQKALDQGIAMATKEQQLELQAHGLYLKIRSQNLQEHSHGASATLLGQLETLLSTPS LKESQLQVYSRLLRTNASIEAHQFDEAKRQLAEARRWADQAKNPLASAWVSAVSGDLYHALQQPQLSLGDYIDAQQQARG LQDPLFLGLLSNQIVNLYQAEQEPQKALQYANEAANYFHALGNPSLLSDALIVLARLNRDQGEMNMALVYFFNALDLLDE GNNRTRIANLKYEIGKTYLQTGNLTLARNYLTAARQSHELGDDKEPLIDTLLLLGELHLKQKEAGIAILQLENALALANQ IGDAQRQFEIFRLLSVAYEQKGYLKQALDSYKNFHQRSEQVRQQQVDLEQEAIRDNYVQVEREQQIKELEQQLDISQHQQ DRYLWSSVITGLLLTLFIYLFFTLWLKLRVARLQGKQLGEAILIEPRTGLANWQRLMSRWPREMARRQQKSERWYLSERP TSEFDDKLHYLLFRVPFLVNCLEQHGYQVSREIEQAFGAYIKELTPQDGRIYDLREGHLLYVVPQRHVEDLHKLAQDLLA AFAAFPCQHSLDRHISLGIVSHPFLPKAATALDHNGLFDLCYLALAGAIQLSEKYQQSVWLELAAIDCQQAAFFNGDVWQ CCLMAIDKGLVKVNSSHEKQWVNWLRLSRTKAPDNQ
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86135; Mature: 86135
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLFFLAMMMSSLSAPDLDLAKEQLSIDLQQAQTLVLTDPARCVQITSAFLTRTANNPK CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCHH QIISNRQEYGYREPLLSYGTAAQATGAHLLKGECLLQLGQFQAAQKALDQGIAMATKEQQ HHHCCHHHCCCCCHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LELQAHGLYLKIRSQNLQEHSHGASATLLGQLETLLSTPSLKESQLQVYSRLLRTNASIE HHHEECCEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCH AHQFDEAKRQLAEARRWADQAKNPLASAWVSAVSGDLYHALQQPQLSLGDYIDAQQQARG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCC LQDPLFLGLLSNQIVNLYQAEQEPQKALQYANEAANYFHALGNPSLLSDALIVLARLNRD CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC QGEMNMALVYFFNALDLLDEGNNRTRIANLKYEIGKTYLQTGNLTLARNYLTAARQSHEL CCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC GDDKEPLIDTLLLLGELHLKQKEAGIAILQLENALALANQIGDAQRQFEIFRLLSVAYEQ CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGYLKQALDSYKNFHQRSEQVRQQQVDLEQEAIRDNYVQVEREQQIKELEQQLDISQHQQ HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH DRYLWSSVITGLLLTLFIYLFFTLWLKLRVARLQGKQLGEAILIEPRTGLANWQRLMSRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH PREMARRQQKSERWYLSERPTSEFDDKLHYLLFRVPFLVNCLEQHGYQVSREIEQAFGAY HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IKELTPQDGRIYDLREGHLLYVVPQRHVEDLHKLAQDLLAAFAAFPCQHSLDRHISLGIV HHHCCCCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCC SHPFLPKAATALDHNGLFDLCYLALAGAIQLSEKYQQSVWLELAAIDCQQAAFFNGDVWQ CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH CCLMAIDKGLVKVNSSHEKQWVNWLRLSRTKAPDNQ HHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNQLFFLAMMMSSLSAPDLDLAKEQLSIDLQQAQTLVLTDPARCVQITSAFLTRTANNPK CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCHH QIISNRQEYGYREPLLSYGTAAQATGAHLLKGECLLQLGQFQAAQKALDQGIAMATKEQQ HHHCCHHHCCCCCHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LELQAHGLYLKIRSQNLQEHSHGASATLLGQLETLLSTPSLKESQLQVYSRLLRTNASIE HHHEECCEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCH AHQFDEAKRQLAEARRWADQAKNPLASAWVSAVSGDLYHALQQPQLSLGDYIDAQQQARG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCC LQDPLFLGLLSNQIVNLYQAEQEPQKALQYANEAANYFHALGNPSLLSDALIVLARLNRD CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC QGEMNMALVYFFNALDLLDEGNNRTRIANLKYEIGKTYLQTGNLTLARNYLTAARQSHEL CCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC GDDKEPLIDTLLLLGELHLKQKEAGIAILQLENALALANQIGDAQRQFEIFRLLSVAYEQ CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGYLKQALDSYKNFHQRSEQVRQQQVDLEQEAIRDNYVQVEREQQIKELEQQLDISQHQQ HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH DRYLWSSVITGLLLTLFIYLFFTLWLKLRVARLQGKQLGEAILIEPRTGLANWQRLMSRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH PREMARRQQKSERWYLSERPTSEFDDKLHYLLFRVPFLVNCLEQHGYQVSREIEQAFGAY HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IKELTPQDGRIYDLREGHLLYVVPQRHVEDLHKLAQDLLAAFAAFPCQHSLDRHISLGIV HHHCCCCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCC SHPFLPKAATALDHNGLFDLCYLALAGAIQLSEKYQQSVWLELAAIDCQQAAFFNGDVWQ CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH CCLMAIDKGLVKVNSSHEKQWVNWLRLSRTKAPDNQ HHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA