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The map label for this gene is ybcL [H]

Identifier: 145300022

GI number: 145300022

Start: 3372408

End: 3372944

Strand: Direct

Name: ybcL [H]

Synonym: ASA_3121

Alternate gene names: 145300022

Gene position: 3372408-3372944 (Clockwise)

Preceding gene: 145300021

Following gene: 145300023

Centisome position: 71.72

GC content: 65.92

Gene sequence:

>537_bases
ATGAAATTACCCCTGCGTTCCGCCCTGCTCTCCCTGCTGTGCGTGGCGGCCCTGCCCGCCTCTGCCATGACCTTGAAGAG
CACGGACATCCAGGAAGGTCAGCTGATGGACAAGGCGTTCAGCTTCAACGGCTTCGGCTGCAAGGGGGAAAACCGCTCGC
CCCAGCTGAGCTGGCAGGACCTGCCGGCCGGCACCAGGAGCGTCGCCATCACGGCCTATGATCCCGATGCCCCCACCGGC
AGCGGCTGGTGGCACTGGCTGGTGGTGAACCTGCCCGCCAATCAGAGCGAGCTGGCCAGCAACGCCTCCGGCAAACTCAA
ACAAGGGCTGGAGCTCGGAACCGACTTCGGCAGCCAGGGCTACGGCGGCCCCTGTCCGCCCGCCGGGCATGGCATGCACC
GCTACCAGTTCACCGCCTGGGCTTTGCCTCAGGATCTCGAGGTCAAGGCAGATACCCCGCCCGCCATGGTAGGCTACATG
CTCAATGCCATGGCGCTGGGCAAGGCCACCCTGACCGCCACCTTCGTCACCCCCTAG

Upstream 100 bases:

>100_bases
TGAGCCTTGATGTTGCACCAGGCTGCCCCTCCTTCGCTAGACTGATCCCCTCATCAGGATCCCCCCATGGAGATCCCCTC
ATCCATAAAGGAGCACCACA

Downstream 100 bases:

>100_bases
GAGCCCGCCGGATGAGCACTACCTTGCTGCAACTGAATCACTATTTCGGGATCCGCGAGCAGCCCCTGCACAGGGTGCTC
ATCTATGCGCCGACCCTCAT

Product: phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKLPLRSALLSLLCVAALPASAMTLKSTDIQEGQLMDKAFSFNGFGCKGENRSPQLSWQDLPAGTRSVAITAYDPDAPTG
SGWWHWLVVNLPANQSELASNASGKLKQGLELGTDFGSQGYGGPCPPAGHGMHRYQFTAWALPQDLEVKADTPPAMVGYM
LNAMALGKATLTATFVTP

Sequences:

>Translated_178_residues
MKLPLRSALLSLLCVAALPASAMTLKSTDIQEGQLMDKAFSFNGFGCKGENRSPQLSWQDLPAGTRSVAITAYDPDAPTG
SGWWHWLVVNLPANQSELASNASGKLKQGLELGTDFGSQGYGGPCPPAGHGMHRYQFTAWALPQDLEVKADTPPAMVGYM
LNAMALGKATLTATFVTP
>Mature_178_residues
MKLPLRSALLSLLCVAALPASAMTLKSTDIQEGQLMDKAFSFNGFGCKGENRSPQLSWQDLPAGTRSVAITAYDPDAPTG
SGWWHWLVVNLPANQSELASNASGKLKQGLELGTDFGSQGYGGPCPPAGHGMHRYQFTAWALPQDLEVKADTPPAMVGYM
LNAMALGKATLTATFVTP

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=181, Percent_Identity=43.0939226519337, Blast_Score=155, Evalue=1e-39,
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=45.5696202531646, Blast_Score=136, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18884; Mature: 18884

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPLRSALLSLLCVAALPASAMTLKSTDIQEGQLMDKAFSFNGFGCKGENRSPQLSWQD
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHC
LPAGTRSVAITAYDPDAPTGSGWWHWLVVNLPANQSELASNASGKLKQGLELGTDFGSQG
CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHHCCCCCCCC
YGGPCPPAGHGMHRYQFTAWALPQDLEVKADTPPAMVGYMLNAMALGKATLTATFVTP
CCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure
MKLPLRSALLSLLCVAALPASAMTLKSTDIQEGQLMDKAFSFNGFGCKGENRSPQLSWQD
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHC
LPAGTRSVAITAYDPDAPTGSGWWHWLVVNLPANQSELASNASGKLKQGLELGTDFGSQG
CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHHCCCCCCCC
YGGPCPPAGHGMHRYQFTAWALPQDLEVKADTPPAMVGYMLNAMALGKATLTATFVTP
CCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]