| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is bcsP31 [H]
Identifier: 145300019
GI number: 145300019
Start: 3368303
End: 3369583
Strand: Direct
Name: bcsP31 [H]
Synonym: ASA_3118
Alternate gene names: 145300019
Gene position: 3368303-3369583 (Clockwise)
Preceding gene: 145300018
Following gene: 145300021
Centisome position: 71.63
GC content: 65.73
Gene sequence:
>1281_bases ATGTACCCAAGCCCCTTGCACCACCTGCCTGCCCTGCTACGAATCACCCTGCCCTGGCTGGCTGCTGCCCTGGCACTGCC CCTGCACGCCACCACGCCCACCAATCTCACCATTGGCACAGGAGCGCTCAACGGCGTCTACTATCCGACCGGAGGCGCCA TCTGCCGCTTGCTGAACGAAGAGAGTGCCAGCAAGGGGCTGCACTGTTCGGTGCAGAGCACCTCAGGTTCGCTGGCCAAC TTGAAGGAGCTTGGCCAAGGCAAAATCCAGCTGGCACTGGTGCAGTCGGATGTGGTTCATCATGCCGCCAAGGGCACGGG CCCCTTCGTGGGCCAGCCGCCCAACGACCGGCTTCGCAGCCTGTTCAGGCTCCATCAGGAGTCGCTGACCCTGCTTGCCA GCGCCACCAGCAGCATCACTACCCTGGCTGATATCGAAGGCAAGCGGGTCGATCTGGGCAACCCGGGCTCGGGGGAGCGC GTCACCAGTCAGGCTCTGCTCGATGCCATGGGTTGGCAGGCAAGCAGCTTTGCCCCCGTCATCCCGGCCGCAGTCAACAG TCGGCTGGAAGGGCTCTGCGATGGCACTCTGGACGCCGCTTTCGTGGTGGCGGGCCACCCCAATCAGGGCATAGGGGACC TGACTGGTCGCTGCAAGGCGCGTATCATCCCTATCGAAGGGGAGCAGATCGACCGCCTGCTCAAACACCACCCTTACTAT CAGCACAGCCGGATCGGCGCCAACCTCTATCCCGGACAGCTCACCAGCGTCAGTACCTTCGCCGTTACCGCCGAGTTGAT CGCACTGGACAGCCTGCCCGAAGCCGAGGTGCGCACAGTGCGAGATGTGCTGACCGCGCGGCTCAAGCAATTTACCCGAT TGCACCCGGCACTGACGCCCCTCACCCAGGACTCCATGCTGGCCGCGGCAGACGTACCGCGCCATCCGGGCATGGAAGAC GCTGCTCTGCCACTGCCGTCACTGACACCTGAATCCCTCACTGCCTCTGCGACAGAAGTGTCGGCGGCAACCCCCGCAAT GGAAGCGGCCTCGGCTGCGCACGCCAGCAGCGAGGTGACAGTTCCCCCGGCGGGCACATCAGCCCCGGTGGCAACCCAGC CCGTCGCGGTACCGCCCGCCTCGGCGGCAGTCTCTCCGGCAGCGGTTGCCACTGGGGCGACAAGCGACACAAAAGGGGGC TCGCCAAGCGCGGCCGGTGCAACGAATGACGCGAGCCAGCCCTTGCCCGCCGCGCCCTCGGCGAGCATCCCCACCCAGTG A
Upstream 100 bases:
>100_bases TGGTTGACTCCATTGTGGCCCGCCGCTGAATAGACAACATGAGACATCATACGGGATGGGCCAGGCCCATCCCTTTTATC AGCCATTGATCCGGTTCACT
Downstream 100 bases:
>100_bases TACTGTGGATACCCAAGGCAAAGAGGCCACCCATACGGGCGGCCTCTTTTTTTTGTATCGTTTTATATCCCTTGGCCCGG CACACACAGCGGGAATGAAG
Product: immunogenic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MYPSPLHHLPALLRITLPWLAAALALPLHATTPTNLTIGTGALNGVYYPTGGAICRLLNEESASKGLHCSVQSTSGSLAN LKELGQGKIQLALVQSDVVHHAAKGTGPFVGQPPNDRLRSLFRLHQESLTLLASATSSITTLADIEGKRVDLGNPGSGER VTSQALLDAMGWQASSFAPVIPAAVNSRLEGLCDGTLDAAFVVAGHPNQGIGDLTGRCKARIIPIEGEQIDRLLKHHPYY QHSRIGANLYPGQLTSVSTFAVTAELIALDSLPEAEVRTVRDVLTARLKQFTRLHPALTPLTQDSMLAAADVPRHPGMED AALPLPSLTPESLTASATEVSAATPAMEAASAAHASSEVTVPPAGTSAPVATQPVAVPPASAAVSPAAVATGATSDTKGG SPSAAGATNDASQPLPAAPSASIPTQ
Sequences:
>Translated_426_residues MYPSPLHHLPALLRITLPWLAAALALPLHATTPTNLTIGTGALNGVYYPTGGAICRLLNEESASKGLHCSVQSTSGSLAN LKELGQGKIQLALVQSDVVHHAAKGTGPFVGQPPNDRLRSLFRLHQESLTLLASATSSITTLADIEGKRVDLGNPGSGER VTSQALLDAMGWQASSFAPVIPAAVNSRLEGLCDGTLDAAFVVAGHPNQGIGDLTGRCKARIIPIEGEQIDRLLKHHPYY QHSRIGANLYPGQLTSVSTFAVTAELIALDSLPEAEVRTVRDVLTARLKQFTRLHPALTPLTQDSMLAAADVPRHPGMED AALPLPSLTPESLTASATEVSAATPAMEAASAAHASSEVTVPPAGTSAPVATQPVAVPPASAAVSPAAVATGATSDTKGG SPSAAGATNDASQPLPAAPSASIPTQ >Mature_426_residues MYPSPLHHLPALLRITLPWLAAALALPLHATTPTNLTIGTGALNGVYYPTGGAICRLLNEESASKGLHCSVQSTSGSLAN LKELGQGKIQLALVQSDVVHHAAKGTGPFVGQPPNDRLRSLFRLHQESLTLLASATSSITTLADIEGKRVDLGNPGSGER VTSQALLDAMGWQASSFAPVIPAAVNSRLEGLCDGTLDAAFVVAGHPNQGIGDLTGRCKARIIPIEGEQIDRLLKHHPYY QHSRIGANLYPGQLTSVSTFAVTAELIALDSLPEAEVRTVRDVLTARLKQFTRLHPALTPLTQDSMLAAADVPRHPGMED AALPLPSLTPESLTASATEVSAATPAMEAASAAHASSEVTVPPAGTSAPVATQPVAVPPASAAVSPAAVATGATSDTKGG SPSAAGATNDASQPLPAAPSASIPTQ
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 43695; Mature: 43695
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPSPLHHLPALLRITLPWLAAALALPLHATTPTNLTIGTGALNGVYYPTGGAICRLLNE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEECCCHHHHHHHHH ESASKGLHCSVQSTSGSLANLKELGQGKIQLALVQSDVVHHAAKGTGPFVGQPPNDRLRS HCCCCCCEEEEECCCCCHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHH LFRLHQESLTLLASATSSITTLADIEGKRVDLGNPGSGERVTSQALLDAMGWQASSFAPV HHHHHHHHHHHHHHHHCCCEEHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC IPAAVNSRLEGLCDGTLDAAFVVAGHPNQGIGDLTGRCKARIIPIEGEQIDRLLKHHPYY CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHCCCH QHSRIGANLYPGQLTSVSTFAVTAELIALDSLPEAEVRTVRDVLTARLKQFTRLHPALTP HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LTQDSMLAAADVPRHPGMEDAALPLPSLTPESLTASATEVSAATPAMEAASAAHASSEVT CCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCHHHHHHHHCCCCCEE VPPAGTSAPVATQPVAVPPASAAVSPAAVATGATSDTKGGSPSAAGATNDASQPLPAAPS ECCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASIPTQ CCCCCC >Mature Secondary Structure MYPSPLHHLPALLRITLPWLAAALALPLHATTPTNLTIGTGALNGVYYPTGGAICRLLNE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEECCCHHHHHHHHH ESASKGLHCSVQSTSGSLANLKELGQGKIQLALVQSDVVHHAAKGTGPFVGQPPNDRLRS HCCCCCCEEEEECCCCCHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHH LFRLHQESLTLLASATSSITTLADIEGKRVDLGNPGSGERVTSQALLDAMGWQASSFAPV HHHHHHHHHHHHHHHHCCCEEHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC IPAAVNSRLEGLCDGTLDAAFVVAGHPNQGIGDLTGRCKARIIPIEGEQIDRLLKHHPYY CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHCCCH QHSRIGANLYPGQLTSVSTFAVTAELIALDSLPEAEVRTVRDVLTARLKQFTRLHPALTP HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LTQDSMLAAADVPRHPGMEDAALPLPSLTPESLTASATEVSAATPAMEAASAAHASSEVT CCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCHHHHHHHHCCCCCEE VPPAGTSAPVATQPVAVPPASAAVSPAAVATGATSDTKGGSPSAAGATNDASQPLPAAPS ECCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASIPTQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]