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The map label for this gene is cybB [H]

Identifier: 145299971

GI number: 145299971

Start: 3299773

End: 3300321

Strand: Direct

Name: cybB [H]

Synonym: ASA_3065

Alternate gene names: 145299971

Gene position: 3299773-3300321 (Clockwise)

Preceding gene: 145299968

Following gene: 145299976

Centisome position: 70.17

GC content: 58.11

Gene sequence:

>549_bases
ATGTTGAAAAATACCGAACAGCGTTATGGCAGCCTGAGTATCGGGCTGCACTGGTTGACCCTGCTATTGATGATGGCCGT
CTACGCATTGATGGAGTTCAGGGATATTTTCCCCAAGGGCTCGGCCGGCCGTGACCTGATGAAGGAGTGGCACTTCATGG
TGGGCTTGTTGATCCTGGCGCAGGTCGTTGTACGGCTGCTGGTGCGCTTTAGCAGCCCGTTACCCCGCATAGTGCCCACC
CTGTCACCCCTGATGCGAACACTGGGTCACCTCGCCCATCTGGCACTGTACGGCTTTCTCATCCTTGCTCCGCTGCTGGG
TTGGTTGCTCCTCAGCGCAGGCGGCAAGCCCATCCCCTTCTTCGGATGTGAGCTGCCCGCCCTGCTTGCACCGGATGATG
GTCTGAAGGGGACGATCAAGGATCTGCACGAAACACTGGCCAACATAGGCTATGCCCTGATCGCCCTGCATGCGGCGGCA
GCCATCTATCACCATCATGTGCTCAAGGACAACACCTTGACCAATATGTGGCCCGAGCGCCGCAGCTAA

Upstream 100 bases:

>100_bases
GTCTCGTAACATGGAAAGGGATACACCAAGGTCCGGCCATCCCAAGCCCACCCAACGAGATAAAAAGTAATGCAATGAGC
GCCCCGAGAAGGACACGAGC

Downstream 100 bases:

>100_bases
ACAGTGGGGGCATACTGGCCCCCTTTGTTCACGCCTCTTTTGCCACCATCTCTGGTACGTTTATGGCCTTGGATTTGCTT
TCAGGTTGCAGCTTTTTCAC

Product: cytochrome b561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MLKNTEQRYGSLSIGLHWLTLLLMMAVYALMEFRDIFPKGSAGRDLMKEWHFMVGLLILAQVVVRLLVRFSSPLPRIVPT
LSPLMRTLGHLAHLALYGFLILAPLLGWLLLSAGGKPIPFFGCELPALLAPDDGLKGTIKDLHETLANIGYALIALHAAA
AIYHHHVLKDNTLTNMWPERRS

Sequences:

>Translated_182_residues
MLKNTEQRYGSLSIGLHWLTLLLMMAVYALMEFRDIFPKGSAGRDLMKEWHFMVGLLILAQVVVRLLVRFSSPLPRIVPT
LSPLMRTLGHLAHLALYGFLILAPLLGWLLLSAGGKPIPFFGCELPALLAPDDGLKGTIKDLHETLANIGYALIALHAAA
AIYHHHVLKDNTLTNMWPERRS
>Mature_182_residues
MLKNTEQRYGSLSIGLHWLTLLLMMAVYALMEFRDIFPKGSAGRDLMKEWHFMVGLLILAQVVVRLLVRFSSPLPRIVPT
LSPLMRTLGHLAHLALYGFLILAPLLGWLLLSAGGKPIPFFGCELPALLAPDDGLKGTIKDLHETLANIGYALIALHAAA
AIYHHHVLKDNTLTNMWPERRS

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI87082013, Length=175, Percent_Identity=40.5714285714286, Blast_Score=136, Evalue=8e-34,
Organism=Escherichia coli, GI87081903, Length=177, Percent_Identity=42.9378531073446, Blast_Score=93, Evalue=9e-21,
Organism=Escherichia coli, GI1787296, Length=176, Percent_Identity=33.5227272727273, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20283; Mature: 20283

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNTEQRYGSLSIGLHWLTLLLMMAVYALMEFRDIFPKGSAGRDLMKEWHFMVGLLILA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
QVVVRLLVRFSSPLPRIVPTLSPLMRTLGHLAHLALYGFLILAPLLGWLLLSAGGKPIPF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FGCELPALLAPDDGLKGTIKDLHETLANIGYALIALHAAAAIYHHHVLKDNTLTNMWPER
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
RS
CC
>Mature Secondary Structure
MLKNTEQRYGSLSIGLHWLTLLLMMAVYALMEFRDIFPKGSAGRDLMKEWHFMVGLLILA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
QVVVRLLVRFSSPLPRIVPTLSPLMRTLGHLAHLALYGFLILAPLLGWLLLSAGGKPIPF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FGCELPALLAPDDGLKGTIKDLHETLANIGYALIALHAAAAIYHHHVLKDNTLTNMWPER
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]