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The map label for this gene is rdgC [H]

Identifier: 145299976

GI number: 145299976

Start: 3306866

End: 3307777

Strand: Direct

Name: rdgC [H]

Synonym: ASA_3070

Alternate gene names: 145299976

Gene position: 3306866-3307777 (Clockwise)

Preceding gene: 145299971

Following gene: 145299977

Centisome position: 70.32

GC content: 60.86

Gene sequence:

>912_bases
ATGTGGTTTAAAAACCTGCAGATTTATCGCTTTACCCGCCCCTTTGACCTGACAGTGGATCAGCTGGAAACCCAGCTCGA
GGCCTGTGCCTTCACCCCTTGCGGCAGTCAGGACATGTCCCGGTTCGGTTGGGTCAAGCCCCTTGGCAAATTCGGTTCGA
CCCTGACCCACTCCGCCTCAGGCCACATCCTCATCTGTGCCCGCAAGGAAGAGAAGATGCTGCCGGGTACCGTCATCAAG
GAGATGCTGGCGGAGAAGGTAGAAGCGATCGAATTCGAGCAGGGCCGCGCCCTCAAGAAGAAAGAGAAGGAAGCGCTGAA
GGAGGAGATACTACACACCCTGCTGCCCCGCGCCTTCAGCCGCACCAGCCAGACCTTCGCCTGGATCAACCCGGCCGACA
ATCTGATGGTGGTGGATGCAGGCTCCGCCAAGAAGGCGGACGATCTGCTGGCACTGCTGCGCAAAAGCATAGGCACCCTG
CCGGTGGTGCCGGTGGCCCTCAAGAACCCGCCCGAAATCACCATGACAGAGTGGCTGAGCGAGGGTAACCTGCCCGCCAC
CTTCGCACTGGAAGATGAAGCCGAGCTGCGCAGTGCCATGGAGCACGGCGGCATCATCCGCTGCAAGCAGCAGGATCTGA
TGACCGACGAGATAAAGAACCACCTGGCCAACGACAAGCTGGTGACCAAGCTGGCTCTGAACTGGGGCGAGACCCTGAGC
TTCGTGCTGGGGGACGACCTCTCCATCAAGCGTCTCAAGTTCAGCGAAGAGCTGCGCGAGCAGAACGACGACGTGACCAG
CGAAGATCCCGCCGCCCGTCTGGATGCGGACTTCGCCCTGGTGACCGCCGAGCTGGCCCAGTTCATCCCGGCACTGTTTG
CCGCCCTGGGTGGCGAAGAGCAGTCCATCTGA

Upstream 100 bases:

>100_bases
TGTGAACTCGATCGTCCTTTTTTTACGAGAATGATTGGCTGATCACAAAGCGCCTCTCTAGTACAATGCCCGCCGGACAA
TCTATGAGACCGAGGACGCC

Downstream 100 bases:

>100_bases
TCAACGCCTGCTTGCATTGCACAAACCGCCCGAGTGGCGGTTTTTTTGTGTCTGCGGCGCATGACCTTTATTGATAAATG
AGTAAGGTATTGATCTGGTT

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MWFKNLQIYRFTRPFDLTVDQLETQLEACAFTPCGSQDMSRFGWVKPLGKFGSTLTHSASGHILICARKEEKMLPGTVIK
EMLAEKVEAIEFEQGRALKKKEKEALKEEILHTLLPRAFSRTSQTFAWINPADNLMVVDAGSAKKADDLLALLRKSIGTL
PVVPVALKNPPEITMTEWLSEGNLPATFALEDEAELRSAMEHGGIIRCKQQDLMTDEIKNHLANDKLVTKLALNWGETLS
FVLGDDLSIKRLKFSEELREQNDDVTSEDPAARLDADFALVTAELAQFIPALFAALGGEEQSI

Sequences:

>Translated_303_residues
MWFKNLQIYRFTRPFDLTVDQLETQLEACAFTPCGSQDMSRFGWVKPLGKFGSTLTHSASGHILICARKEEKMLPGTVIK
EMLAEKVEAIEFEQGRALKKKEKEALKEEILHTLLPRAFSRTSQTFAWINPADNLMVVDAGSAKKADDLLALLRKSIGTL
PVVPVALKNPPEITMTEWLSEGNLPATFALEDEAELRSAMEHGGIIRCKQQDLMTDEIKNHLANDKLVTKLALNWGETLS
FVLGDDLSIKRLKFSEELREQNDDVTSEDPAARLDADFALVTAELAQFIPALFAALGGEEQSI
>Mature_303_residues
MWFKNLQIYRFTRPFDLTVDQLETQLEACAFTPCGSQDMSRFGWVKPLGKFGSTLTHSASGHILICARKEEKMLPGTVIK
EMLAEKVEAIEFEQGRALKKKEKEALKEEILHTLLPRAFSRTSQTFAWINPADNLMVVDAGSAKKADDLLALLRKSIGTL
PVVPVALKNPPEITMTEWLSEGNLPATFALEDEAELRSAMEHGGIIRCKQQDLMTDEIKNHLANDKLVTKLALNWGETLS
FVLGDDLSIKRLKFSEELREQNDDVTSEDPAARLDADFALVTAELAQFIPALFAALGGEEQSI

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=301, Percent_Identity=56.4784053156146, Blast_Score=362, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33776; Mature: 33776

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLQIYRFTRPFDLTVDQLETQLEACAFTPCGSQDMSRFGWVKPLGKFGSTLTHSAS
CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCC
GHILICARKEEKMLPGTVIKEMLAEKVEAIEFEQGRALKKKEKEALKEEILHTLLPRAFS
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RTSQTFAWINPADNLMVVDAGSAKKADDLLALLRKSIGTLPVVPVALKNPPEITMTEWLS
HCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHC
EGNLPATFALEDEAELRSAMEHGGIIRCKQQDLMTDEIKNHLANDKLVTKLALNWGETLS
CCCCCEEEEECCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHH
FVLGDDLSIKRLKFSEELREQNDDVTSEDPAARLDADFALVTAELAQFIPALFAALGGEE
HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
QSI
CCC
>Mature Secondary Structure
MWFKNLQIYRFTRPFDLTVDQLETQLEACAFTPCGSQDMSRFGWVKPLGKFGSTLTHSAS
CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCC
GHILICARKEEKMLPGTVIKEMLAEKVEAIEFEQGRALKKKEKEALKEEILHTLLPRAFS
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RTSQTFAWINPADNLMVVDAGSAKKADDLLALLRKSIGTLPVVPVALKNPPEITMTEWLS
HCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHC
EGNLPATFALEDEAELRSAMEHGGIIRCKQQDLMTDEIKNHLANDKLVTKLALNWGETLS
CCCCCEEEEECCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHH
FVLGDDLSIKRLKFSEELREQNDDVTSEDPAARLDADFALVTAELAQFIPALFAALGGEE
HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
QSI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA