| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is aceK [H]
Identifier: 145299950
GI number: 145299950
Start: 3278217
End: 3279944
Strand: Direct
Name: aceK [H]
Synonym: ASA_3042
Alternate gene names: 145299950
Gene position: 3278217-3279944 (Clockwise)
Preceding gene: 145299945
Following gene: 145299952
Centisome position: 69.71
GC content: 59.32
Gene sequence:
>1728_bases ATGCAGCAGCCATTGGAACAGGCCGTCGCCGAGACGATCTTGCAACGCTTCGAGTCGTTTTACAGCCGGTTTCTCGAAAT AACCCAGGGCAGCAAGAGCCGCTTCGAAAACAGTGACTGGCTGGGAGTACAGCTGGCCGGACGCGAGCGCATTCGCCTCT ATGATCACCACGTCGGCGCCACCACGGCCCTGATCAAGCAGATGATGGGGGAGCATCACGCCACTCAGGAGCTGCTCAAA CGGGTGAAAGGCGCCTTCAGTGATCTGCTGCCCCGTTGTGACAACTTCGAGGTGGCGGAGTCCTTCTTCAACTCCGTCTA TCGCCGCATCTTCCGCCATCGCAACATTCGCGACGAGAACCTCTACATCCATCCCTTTCGCAGCCGGGGAGAGCATCCCG ACTTGAGCGCCCTGCTGCGGGTCTATCGCACTGACCTCACCCATCTGCCCCAGACCCTGAGCCAGATGCTGGGGGATTAC AGCTTCACCCTCCCCTATGAAGACAAGCAGCGCGACATTGTCGACATCCACCGCCATCTTGCCGAGAACGGCCCGCAGAT CCTGCATGAAGAGCCCTTCGCCATCGAGCTGCTCAAAGAGGTGTTCTACCGCAACAAGGGCGCCTATCTGGTGGGACTTA TTCGGGTGAAGGGGCAGGTGTTCCCCTTCATTCTGCCGCTGCTCAGCACAGGCCAGAGCATCTATGTGGATACCGTCATC TTCGAGCCGGAGCTGGCCTCCATCGTGGTCGGCTTCGCCCGCGCCTACTTCATGGTCTACGCCCCTGTGCCGGCGCTGTT TGTGGTGTTTTTGCGCCAGATCATGCCCCACAAGCCCGATTATGAGATCTACAACGCCATCGGCTGCCAGAAGCACGGCA AGACTGAGCTCTATCGTCACTACCAGCAACACCTGGCCCAGAGCCGGGAACAATTTGTCATCGCCCCCGGCATCAAGGGA ATGGTGATGAGCGTGTTCACCCTTCCCTCCTACGACGTTGTGTTCAAGGTGATAAAGGACGAGTTCACCCCGCCCAAGGA TGTGAGTCACGAGCAGGTGCGGGCGAAATACCGGCTGGTAAAACAGCACGATCGGGTGGGCCGCATGGCCGATACCCAGG AGTTCACCAACTTCGAGTTCCCCCTGGATCGCATCTCGCCCGAGCTCCTGGCAGAGCTCAAGACGGTGGCCCCCTCTGCG CTCACCATCACCAGTGACAAGCTGGTGATCAAGCACCTCTACACAGAGCGCAAGATGATCCCGCTCAACCTCTATCTGGA CAAGGCGGACGAGCAGCAGACCCGGCTCGCGCTGGAGGAGTACGGCAACGCCATCAAGCAGCTGGCGGCGGCCAACATCT TCCCGGGAGACATGCTGTTCAAGAACTTCGGCGTCACCCGCCACGGCCGGGTGGTCTTCTACGACTACGACGAGATCTGC TACATGACGGAGTGCAACTTCCGCCAGATCCCGCCACCCCGCTACCCGGAAGATGAATGGAGCGCCGAGCCCTGGTATTC GGTGGCCCCCAACGACATCTTCCCCGAGGAGTTCGCCACCTTCCTGCTGCAAAAGCCCCAGGTGCGGGAGATCATGATGC AGCTGCACAAGGAGATGTTCGACGCCAACTACTGGAAGATGCTGCAGAGCAACATCAAGGTGGGGGTGTTCGAGGATGTC TATCCCTATCGACGCAAGAAGCGCTTCAAGTTCCAGCGAGGGGGATGA
Upstream 100 bases:
>100_bases ATGCCGTGAGTGATTGAGCGCTTGCAGGGCAAGGACAGGACGACAGACCAGCCCCGGACTCAGCCGCCATACCAGCCGAC ACATCACAAGGAAGAGAGAG
Downstream 100 bases:
>100_bases AGAGGCGAGCCTCGCCTTGCTGCCAACTTGAGATGCAATGCATATTGCGACGGCAGAACCGGGAGTCTTGCCACAACGCT ATGGCGCAGTATTGAAAAAA
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P [H]
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MQQPLEQAVAETILQRFESFYSRFLEITQGSKSRFENSDWLGVQLAGRERIRLYDHHVGATTALIKQMMGEHHATQELLK RVKGAFSDLLPRCDNFEVAESFFNSVYRRIFRHRNIRDENLYIHPFRSRGEHPDLSALLRVYRTDLTHLPQTLSQMLGDY SFTLPYEDKQRDIVDIHRHLAENGPQILHEEPFAIELLKEVFYRNKGAYLVGLIRVKGQVFPFILPLLSTGQSIYVDTVI FEPELASIVVGFARAYFMVYAPVPALFVVFLRQIMPHKPDYEIYNAIGCQKHGKTELYRHYQQHLAQSREQFVIAPGIKG MVMSVFTLPSYDVVFKVIKDEFTPPKDVSHEQVRAKYRLVKQHDRVGRMADTQEFTNFEFPLDRISPELLAELKTVAPSA LTITSDKLVIKHLYTERKMIPLNLYLDKADEQQTRLALEEYGNAIKQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTECNFRQIPPPRYPEDEWSAEPWYSVAPNDIFPEEFATFLLQKPQVREIMMQLHKEMFDANYWKMLQSNIKVGVFEDV YPYRRKKRFKFQRGG
Sequences:
>Translated_575_residues MQQPLEQAVAETILQRFESFYSRFLEITQGSKSRFENSDWLGVQLAGRERIRLYDHHVGATTALIKQMMGEHHATQELLK RVKGAFSDLLPRCDNFEVAESFFNSVYRRIFRHRNIRDENLYIHPFRSRGEHPDLSALLRVYRTDLTHLPQTLSQMLGDY SFTLPYEDKQRDIVDIHRHLAENGPQILHEEPFAIELLKEVFYRNKGAYLVGLIRVKGQVFPFILPLLSTGQSIYVDTVI FEPELASIVVGFARAYFMVYAPVPALFVVFLRQIMPHKPDYEIYNAIGCQKHGKTELYRHYQQHLAQSREQFVIAPGIKG MVMSVFTLPSYDVVFKVIKDEFTPPKDVSHEQVRAKYRLVKQHDRVGRMADTQEFTNFEFPLDRISPELLAELKTVAPSA LTITSDKLVIKHLYTERKMIPLNLYLDKADEQQTRLALEEYGNAIKQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTECNFRQIPPPRYPEDEWSAEPWYSVAPNDIFPEEFATFLLQKPQVREIMMQLHKEMFDANYWKMLQSNIKVGVFEDV YPYRRKKRFKFQRGG >Mature_575_residues MQQPLEQAVAETILQRFESFYSRFLEITQGSKSRFENSDWLGVQLAGRERIRLYDHHVGATTALIKQMMGEHHATQELLK RVKGAFSDLLPRCDNFEVAESFFNSVYRRIFRHRNIRDENLYIHPFRSRGEHPDLSALLRVYRTDLTHLPQTLSQMLGDY SFTLPYEDKQRDIVDIHRHLAENGPQILHEEPFAIELLKEVFYRNKGAYLVGLIRVKGQVFPFILPLLSTGQSIYVDTVI FEPELASIVVGFARAYFMVYAPVPALFVVFLRQIMPHKPDYEIYNAIGCQKHGKTELYRHYQQHLAQSREQFVIAPGIKG MVMSVFTLPSYDVVFKVIKDEFTPPKDVSHEQVRAKYRLVKQHDRVGRMADTQEFTNFEFPLDRISPELLAELKTVAPSA LTITSDKLVIKHLYTERKMIPLNLYLDKADEQQTRLALEEYGNAIKQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTECNFRQIPPPRYPEDEWSAEPWYSVAPNDIFPEEFATFLLQKPQVREIMMQLHKEMFDANYWKMLQSNIKVGVFEDV YPYRRKKRFKFQRGG
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family [H]
Homologues:
Organism=Escherichia coli, GI1790446, Length=586, Percent_Identity=51.3651877133106, Blast_Score=577, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010452 - ProDom: PD043552 [H]
Pfam domain/function: PF06315 AceK [H]
EC number: =2.7.11.5 [H]
Molecular weight: Translated: 67386; Mature: 67386
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQPLEQAVAETILQRFESFYSRFLEITQGSKSRFENSDWLGVQLAGRERIRLYDHHVGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCEEEHHHHCCH TTALIKQMMGEHHATQELLKRVKGAFSDLLPRCDNFEVAESFFNSVYRRIFRHRNIRDEN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC LYIHPFRSRGEHPDLSALLRVYRTDLTHLPQTLSQMLGDYSFTLPYEDKQRDIVDIHRHL EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHH AENGPQILHEEPFAIELLKEVFYRNKGAYLVGLIRVKGQVFPFILPLLSTGQSIYVDTVI HHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEEE FEPELASIVVGFARAYFMVYAPVPALFVVFLRQIMPHKPDYEIYNAIGCQKHGKTELYRH ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHH YQQHLAQSREQFVIAPGIKGMVMSVFTLPSYDVVFKVIKDEFTPPKDVSHEQVRAKYRLV HHHHHHCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KQHDRVGRMADTQEFTNFEFPLDRISPELLAELKTVAPSALTITSDKLVIKHLYTERKMI HHHHHHCCCCCHHHHCCCCCCHHHCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEE PLNLYLDKADEQQTRLALEEYGNAIKQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCCEE YMTECNFRQIPPPRYPEDEWSAEPWYSVAPNDIFPEEFATFLLQKPQVREIMMQLHKEMF EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH DANYWKMLQSNIKVGVFEDVYPYRRKKRFKFQRGG CCHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQQPLEQAVAETILQRFESFYSRFLEITQGSKSRFENSDWLGVQLAGRERIRLYDHHVGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCEEEHHHHCCH TTALIKQMMGEHHATQELLKRVKGAFSDLLPRCDNFEVAESFFNSVYRRIFRHRNIRDEN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC LYIHPFRSRGEHPDLSALLRVYRTDLTHLPQTLSQMLGDYSFTLPYEDKQRDIVDIHRHL EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHH AENGPQILHEEPFAIELLKEVFYRNKGAYLVGLIRVKGQVFPFILPLLSTGQSIYVDTVI HHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEEE FEPELASIVVGFARAYFMVYAPVPALFVVFLRQIMPHKPDYEIYNAIGCQKHGKTELYRH ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHH YQQHLAQSREQFVIAPGIKGMVMSVFTLPSYDVVFKVIKDEFTPPKDVSHEQVRAKYRLV HHHHHHCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KQHDRVGRMADTQEFTNFEFPLDRISPELLAELKTVAPSALTITSDKLVIKHLYTERKMI HHHHHHCCCCCHHHHCCCCCCHHHCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEE PLNLYLDKADEQQTRLALEEYGNAIKQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCCEE YMTECNFRQIPPPRYPEDEWSAEPWYSVAPNDIFPEEFATFLLQKPQVREIMMQLHKEMF EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH DANYWKMLQSNIKVGVFEDVYPYRRKKRFKFQRGG CCHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA