| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299952
Identifier: 145299952
GI number: 145299952
Start: 3280688
End: 3281164
Strand: Direct
Name: 145299952
Synonym: ASA_3044
Alternate gene names: NA
Gene position: 3280688-3281164 (Clockwise)
Preceding gene: 145299950
Following gene: 145299955
Centisome position: 69.77
GC content: 56.81
Gene sequence:
>477_bases ATGGTTAAATCACTCATCGTCACACTGGTTTCATGCTTAAGCCTCAACGCTCAGGCCGCCGACTGGGATTTTCTCAAGAG CGAGGCTGACAGCCAGCTCTACGTCAAAAGCTACTCAGGCGTGCTGCTCGACAGCCAGACTCATCACAGCGACAGTTTCG ACCTCTGGCTCATCAACACCGGCTATCAATATCCGATCATGGATGACGTCAGCCTCTACATGGAAGCGGGCCCGGCCATA GGCCCGCACAGCGAACAGTCCGGCTACAACCTGAGCTCGGGGGTGCGCTACCAGTTCTCCCCCACATTGAACATCGGCAG CCAGCTCAAACAGCTGGAAGTGCACAAGGCCAGCACACTGCTGGAGCTCAACACCAGCCTGCTGCTTACACCGCAGCTCG CCATCACGGCCAACTACGGCGTGAGTACATTCAGTACTGAGCACTCCCTCAGCCTGGGCGTAGGCTTCAACTTCTGA
Upstream 100 bases:
>100_bases GGCAGATTAAAACTCTTTTATTGTGATCTCCGTTCCCTTTACTACCAACTGGCATGTGCCATGCTTGTATTCCTGTTCCG GACCCAGGGAGGGGAAAAGA
Downstream 100 bases:
>100_bases CCGATCAGATAAGCCGGGTGGCACTGACCAGTACGCCGTTGAGGTCGGCGTAAACATAGTCACCCGGATGTATGGTCACA CCGGCAAACGACACCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MVKSLIVTLVSCLSLNAQAADWDFLKSEADSQLYVKSYSGVLLDSQTHHSDSFDLWLINTGYQYPIMDDVSLYMEAGPAI GPHSEQSGYNLSSGVRYQFSPTLNIGSQLKQLEVHKASTLLELNTSLLLTPQLAITANYGVSTFSTEHSLSLGVGFNF
Sequences:
>Translated_158_residues MVKSLIVTLVSCLSLNAQAADWDFLKSEADSQLYVKSYSGVLLDSQTHHSDSFDLWLINTGYQYPIMDDVSLYMEAGPAI GPHSEQSGYNLSSGVRYQFSPTLNIGSQLKQLEVHKASTLLELNTSLLLTPQLAITANYGVSTFSTEHSLSLGVGFNF >Mature_158_residues MVKSLIVTLVSCLSLNAQAADWDFLKSEADSQLYVKSYSGVLLDSQTHHSDSFDLWLINTGYQYPIMDDVSLYMEAGPAI GPHSEQSGYNLSSGVRYQFSPTLNIGSQLKQLEVHKASTLLELNTSLLLTPQLAITANYGVSTFSTEHSLSLGVGFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17302; Mature: 17302
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSLIVTLVSCLSLNAQAADWDFLKSEADSQLYVKSYSGVLLDSQTHHSDSFDLWLINT CHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEECCCEEEECCCCCCCCEEEEEEEC GYQYPIMDDVSLYMEAGPAIGPHSEQSGYNLSSGVRYQFSPTLNIGSQLKQLEVHKASTL CCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHEE LELNTSLLLTPQLAITANYGVSTFSTEHSLSLGVGFNF EEECCEEEECCEEEEEECCCCEEECCCCCEEEEEECCC >Mature Secondary Structure MVKSLIVTLVSCLSLNAQAADWDFLKSEADSQLYVKSYSGVLLDSQTHHSDSFDLWLINT CHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEECCCEEEECCCCCCCCEEEEEEEC GYQYPIMDDVSLYMEAGPAIGPHSEQSGYNLSSGVRYQFSPTLNIGSQLKQLEVHKASTL CCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHEE LELNTSLLLTPQLAITANYGVSTFSTEHSLSLGVGFNF EEECCEEEECCEEEEEECCCCEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA