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The map label for this gene is viuB [H]

Identifier: 145299914

GI number: 145299914

Start: 3241940

End: 3242746

Strand: Direct

Name: viuB [H]

Synonym: ASA_3006

Alternate gene names: 145299914

Gene position: 3241940-3242746 (Clockwise)

Preceding gene: 145299913

Following gene: 145299915

Centisome position: 68.94

GC content: 65.18

Gene sequence:

>807_bases
ATGTCTCAGCCCGCCCCGGTCAATCGCCCTCGTCTGCTCACGGTCAAACACGTCCGGGATGTGAGCCCGCACCTGCGCCG
AGTCTGCCTGACCAGCCCGGAACTCGCTGACTACCCCTTCACCTGCGGCGGCGCCCATATCAAGATCATGCTGCCACAGC
CGGGCCAGACCCACGCCATACTGCCCACGCCCACCCCGCAAGGGCCGCGCTGGGAAGACCCGAGCCAGCGCCCCATCATG
CGCACCTTCACCATACGGGCATTTCGTCGCGAGGCACTGGAGCTGGACATCGATTTCGCGCTGCACGGCGATGCCGGCCC
CGCCAGCCGCTTTGCCATGCAGGTCAAACCCGGCGATCTGCTTGCCATCTCGGGCCCGGGTGGCCCGGATCCCATGCTGC
AGCCCGCCCGGCACTACTACATGGTGGGTGACCTCACCTCCCTGCCCGCCATCAGTGCCATGGCCGAGGTAATGCCCGCT
GACGCCCAGGGCCATATCGCCCTGCTGGTACCCTATCAGGAAGATGTACAGGATCTGTCGCTACCCGCCGGCGTGACATT
GCGCTGGTTTATCCGCACCCCCGAGCAGACTGAACCACTGGTGGCGTATTTCACCGCCCTGCCGATGCAGGAGCAGGCGA
GCTACTTCTGGTTCGGCGGTGAAGAGGGGCTGGTGGTGCCATTGCGCCGTCACGTCAGGCGCACCCTGGAGGTGGATCGC
ACTCGGGTCTACGCAGTCCCCTACTGGCGCCACGGCAAGGATGAAGAAGCCTATCACCACGCCCGTCATGATGTGATGGA
CAGCTGA

Upstream 100 bases:

>100_bases
CCTGTTCATGCCCCTTTCCTGACGGGCTGCCACACAAAGCAATTGATAATAGTTTTCATTTAATGAAAAATGGGCGCCAT
TATCAGTCAGGAGTATCCAT

Downstream 100 bases:

>100_bases
CCTGCCCATTTTTTCCTTGGAATATCAAGCTCATGGCCTGCCGGTCATGGGCTTGATTGCTATGTGCACTCCCCTGATTT
GCTCCTTGCCCCCCCATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSQPAPVNRPRLLTVKHVRDVSPHLRRVCLTSPELADYPFTCGGAHIKIMLPQPGQTHAILPTPTPQGPRWEDPSQRPIM
RTFTIRAFRREALELDIDFALHGDAGPASRFAMQVKPGDLLAISGPGGPDPMLQPARHYYMVGDLTSLPAISAMAEVMPA
DAQGHIALLVPYQEDVQDLSLPAGVTLRWFIRTPEQTEPLVAYFTALPMQEQASYFWFGGEEGLVVPLRRHVRRTLEVDR
TRVYAVPYWRHGKDEEAYHHARHDVMDS

Sequences:

>Translated_268_residues
MSQPAPVNRPRLLTVKHVRDVSPHLRRVCLTSPELADYPFTCGGAHIKIMLPQPGQTHAILPTPTPQGPRWEDPSQRPIM
RTFTIRAFRREALELDIDFALHGDAGPASRFAMQVKPGDLLAISGPGGPDPMLQPARHYYMVGDLTSLPAISAMAEVMPA
DAQGHIALLVPYQEDVQDLSLPAGVTLRWFIRTPEQTEPLVAYFTALPMQEQASYFWFGGEEGLVVPLRRHVRRTLEVDR
TRVYAVPYWRHGKDEEAYHHARHDVMDS
>Mature_267_residues
SQPAPVNRPRLLTVKHVRDVSPHLRRVCLTSPELADYPFTCGGAHIKIMLPQPGQTHAILPTPTPQGPRWEDPSQRPIMR
TFTIRAFRREALELDIDFALHGDAGPASRFAMQVKPGDLLAISGPGGPDPMLQPARHYYMVGDLTSLPAISAMAEVMPAD
AQGHIALLVPYQEDVQDLSLPAGVTLRWFIRTPEQTEPLVAYFTALPMQEQASYFWFGGEEGLVVPLRRHVRRTLEVDRT
RVYAVPYWRHGKDEEAYHHARHDVMDS

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=249, Percent_Identity=30.1204819277108, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 30136; Mature: 30005

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPAPVNRPRLLTVKHVRDVSPHLRRVCLTSPELADYPFTCGGAHIKIMLPQPGQTHAI
CCCCCCCCCCEEEEEHHHHHCCHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCCEEE
LPTPTPQGPRWEDPSQRPIMRTFTIRAFRREALELDIDFALHGDAGPASRFAMQVKPGDL
ECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEEEEECCCCCCHHEEEEECCCCE
LAISGPGGPDPMLQPARHYYMVGDLTSLPAISAMAEVMPADAQGHIALLVPYQEDVQDLS
EEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHC
LPAGVTLRWFIRTPEQTEPLVAYFTALPMQEQASYFWFGGEEGLVVPLRRHVRRTLEVDR
CCCCCEEEEEEECCCCCCCCEEEEHHCCCHHCCCEEEECCCCCEEHHHHHHHHHHHHCCC
TRVYAVPYWRHGKDEEAYHHARHDVMDS
EEEEEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQPAPVNRPRLLTVKHVRDVSPHLRRVCLTSPELADYPFTCGGAHIKIMLPQPGQTHAI
CCCCCCCCCEEEEEHHHHHCCHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCCEEE
LPTPTPQGPRWEDPSQRPIMRTFTIRAFRREALELDIDFALHGDAGPASRFAMQVKPGDL
ECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEEEEECCCCCCHHEEEEECCCCE
LAISGPGGPDPMLQPARHYYMVGDLTSLPAISAMAEVMPADAQGHIALLVPYQEDVQDLS
EEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHC
LPAGVTLRWFIRTPEQTEPLVAYFTALPMQEQASYFWFGGEEGLVVPLRRHVRRTLEVDR
CCCCCEEEEEEECCCCCCCCEEEEHHCCCHHCCCEEEECCCCCEEHHHHHHHHHHHHCCC
TRVYAVPYWRHGKDEEAYHHARHDVMDS
EEEEEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]