Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
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Accession | NC_009348 |
Length | 4,702,402 |
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The map label for this gene is aroH [H]
Identifier: 145299915
GI number: 145299915
Start: 3243011
End: 3244117
Strand: Direct
Name: aroH [H]
Synonym: ASA_3007
Alternate gene names: 145299915
Gene position: 3243011-3244117 (Clockwise)
Preceding gene: 145299914
Following gene: 145299916
Centisome position: 68.96
GC content: 63.05
Gene sequence:
>1107_bases ATGGCAGTTTTGAACTCAGTAATGCGCGCCTTCGCGGTGGAGGCTCTTCCCACTCCTGCCGACCTGTTGGCACTTCATCC CTGTCCCAGCGAGGTTGCAGCGCAGATCGATCACCATCGCCAGCAGGTTCGCCAGATCCTGACAGGAGAAGACGATCGCC TGCTGGTGGTGATAGGTCCCTGCTCCATCCACGATCCCCTCGCCGCCCTCGATTACGCACAGCGGCTGGTACGGCTGGCC GACGCCTATCAAGACAGGTTGCAGATAGTGATGCGCACCTATTTCGAGAAGCCACGCACCACCGTGGGCTGGAAGGGGCT GGTATTCGACCCCCATCTGGATGGCAGCAACGACATAGGTCACGGCCTGCGGCTGGCACGTCAGTTGCTGCTCGACATCA ACCGGCTGGGGCTGGCCACCGCCACCGAGTTTCTCGATACCACCAGCTTCCTCTATCTTGCCGACCTCATCAGCTGGGGA GCCATCGGCGCCCGCACCACCGAATCCCAGGTGCACCGTCAGCTGGCCTCGGCGCTGCCCTGCCCTGTCGGCTTCAAGAA CGGCACGGACGGCAATATCCGGGTCGCCATCGATGCCATCCAGGCCAGTGAAGCCTCTCATCTGTTCACCGCACCGGGCA GTCAGGGCGGCATTGTGGTGATCAAGAGCGAAGGCAATCCCGCAGGCCACATCATATTGCGTGGCGGCACCCGCCCCAAT TATCACCAGAGCGACGTGGAGGATGCCGCCGAACGCCTGACGCGGCAGGGGCTCAGCCACCGCCTGATGGTGGATTGCAG CCACGGCAACAGCCAGAAACTGCACAAAAACCAGATCCGGGTGGCAGGTGAGCTCTGCCGTCAGCTGGGGGAAGGCAGCG ACACCATCGCCGCCGTCATGGTCGAGAGCTTCTTGCAAGGGGGCAGCCAGAAGCCTGCGCCATTGAACGAACTCGCCTAT GGCCAGTCGGTCACCGACGCCTGCCTGTGCTGGGACGATACCCAGACCCTGCTCGCCATGCTGGCCGAGGCTGTCGAGTT ACGTCGCCAGAGCCGGACCCGACGCCAGCCCGGAACGGTACACTGGGATGCCCAATTGGCCAGCTGA
Upstream 100 bases:
>100_bases ATAAACAGTGATGACGCCCCATTGCAGCCTCTCTCCATGCCCCGGGTTTGGATGTGGAGCGCACGTCATTCACTCCCGTT TGCACAGCAAGGTAATCCAG
Downstream 100 bases:
>100_bases ACAAGAGAAGGCTCCCCCAGCGGGAGCCTTATTATCTGCAAGTCCCGTCATTACCATTTAGTCCGCCAGGTCGCCAAATA AAATGGCCCAGACTTATCCG
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MAVLNSVMRAFAVEALPTPADLLALHPCPSEVAAQIDHHRQQVRQILTGEDDRLLVVIGPCSIHDPLAALDYAQRLVRLA DAYQDRLQIVMRTYFEKPRTTVGWKGLVFDPHLDGSNDIGHGLRLARQLLLDINRLGLATATEFLDTTSFLYLADLISWG AIGARTTESQVHRQLASALPCPVGFKNGTDGNIRVAIDAIQASEASHLFTAPGSQGGIVVIKSEGNPAGHIILRGGTRPN YHQSDVEDAAERLTRQGLSHRLMVDCSHGNSQKLHKNQIRVAGELCRQLGEGSDTIAAVMVESFLQGGSQKPAPLNELAY GQSVTDACLCWDDTQTLLAMLAEAVELRRQSRTRRQPGTVHWDAQLAS
Sequences:
>Translated_368_residues MAVLNSVMRAFAVEALPTPADLLALHPCPSEVAAQIDHHRQQVRQILTGEDDRLLVVIGPCSIHDPLAALDYAQRLVRLA DAYQDRLQIVMRTYFEKPRTTVGWKGLVFDPHLDGSNDIGHGLRLARQLLLDINRLGLATATEFLDTTSFLYLADLISWG AIGARTTESQVHRQLASALPCPVGFKNGTDGNIRVAIDAIQASEASHLFTAPGSQGGIVVIKSEGNPAGHIILRGGTRPN YHQSDVEDAAERLTRQGLSHRLMVDCSHGNSQKLHKNQIRVAGELCRQLGEGSDTIAAVMVESFLQGGSQKPAPLNELAY GQSVTDACLCWDDTQTLLAMLAEAVELRRQSRTRRQPGTVHWDAQLAS >Mature_367_residues AVLNSVMRAFAVEALPTPADLLALHPCPSEVAAQIDHHRQQVRQILTGEDDRLLVVIGPCSIHDPLAALDYAQRLVRLAD AYQDRLQIVMRTYFEKPRTTVGWKGLVFDPHLDGSNDIGHGLRLARQLLLDINRLGLATATEFLDTTSFLYLADLISWGA IGARTTESQVHRQLASALPCPVGFKNGTDGNIRVAIDAIQASEASHLFTAPGSQGGIVVIKSEGNPAGHIILRGGTRPNY HQSDVEDAAERLTRQGLSHRLMVDCSHGNSQKLHKNQIRVAGELCRQLGEGSDTIAAVMVESFLQGGSQKPAPLNELAYG QSVTDACLCWDDTQTLLAMLAEAVELRRQSRTRRQPGTVHWDAQLAS
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=341, Percent_Identity=55.7184750733138, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1786969, Length=349, Percent_Identity=53.8681948424069, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI1788953, Length=326, Percent_Identity=50.6134969325153, Blast_Score=332, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6320240, Length=343, Percent_Identity=46.3556851311953, Blast_Score=300, Evalue=2e-82, Organism=Saccharomyces cerevisiae, GI6319726, Length=350, Percent_Identity=45.7142857142857, Blast_Score=298, Evalue=1e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 40106; Mature: 39975
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLNSVMRAFAVEALPTPADLLALHPCPSEVAAQIDHHRQQVRQILTGEDDRLLVVIGP CHHHHHHHHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC CSIHDPLAALDYAQRLVRLADAYQDRLQIVMRTYFEKPRTTVGWKGLVFDPHLDGSNDIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHH HGLRLARQLLLDINRLGLATATEFLDTTSFLYLADLISWGAIGARTTESQVHRQLASALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC CPVGFKNGTDGNIRVAIDAIQASEASHLFTAPGSQGGIVVIKSEGNPAGHIILRGGTRPN CCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCC YHQSDVEDAAERLTRQGLSHRLMVDCSHGNSQKLHKNQIRVAGELCRQLGEGSDTIAAVM CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH VESFLQGGSQKPAPLNELAYGQSVTDACLCWDDTQTLLAMLAEAVELRRQSRTRRQPGTV HHHHHCCCCCCCCCHHHHHCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCE HWDAQLAS EECCEECC >Mature Secondary Structure AVLNSVMRAFAVEALPTPADLLALHPCPSEVAAQIDHHRQQVRQILTGEDDRLLVVIGP HHHHHHHHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC CSIHDPLAALDYAQRLVRLADAYQDRLQIVMRTYFEKPRTTVGWKGLVFDPHLDGSNDIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHH HGLRLARQLLLDINRLGLATATEFLDTTSFLYLADLISWGAIGARTTESQVHRQLASALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC CPVGFKNGTDGNIRVAIDAIQASEASHLFTAPGSQGGIVVIKSEGNPAGHIILRGGTRPN CCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCC YHQSDVEDAAERLTRQGLSHRLMVDCSHGNSQKLHKNQIRVAGELCRQLGEGSDTIAAVM CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH VESFLQGGSQKPAPLNELAYGQSVTDACLCWDDTQTLLAMLAEAVELRRQSRTRRQPGTV HHHHHCCCCCCCCCHHHHHCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCE HWDAQLAS EECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9422601 [H]