Click here to switch to the map view.

The map label for this gene is adhB [H]

Identifier: 145299873

GI number: 145299873

Start: 3188790

End: 3189989

Strand: Direct

Name: adhB [H]

Synonym: ASA_2963

Alternate gene names: 145299873

Gene position: 3188790-3189989 (Clockwise)

Preceding gene: 145299872

Following gene: 145299876

Centisome position: 67.81

GC content: 63.58

Gene sequence:

>1200_bases
ATGATCCGCACCCTGTCACTGACCGCCACCGCCCTGCTGGCAGCCATGGCGGCCCAACCCGCGCTGGCGGGCTCCGCCAT
GTCGGCAGGCGAGTATATTTCCAAGCTGGGGGATTGCGCCGCCTGCCACACCAGCGAGGCCAGTGCCCCGCTTGCCGGTG
GCAAGGGCTTCCCGACTCCCATAGGCACAGTGTTCGCCACCAACATCACCCCTGACAAGACCCACGGCATCGGCAACTAC
AGCCTGCCGGAGTTCATCAAGGTGATGCGCGAAGGGGTGGCCAGGGATGGTCACCAGCTCTATCCGGCCATGCCCTACAC
TGCCTACGCCAAGATGAGCGATAAGGATCTTGAAGATCTCTATCACTACCTGATGAAGGAGGTTCCCCCGCTGGCGGTGG
CCAACAAGGAGAGCGACATCCCCTGGCCGCTCAATATGCGCTGGCCGCTGATGGGCTGGAACTGGCTCTATCACGATGAC
AGTCGCTTCACCCCGGTAGCGGGCAAGAGCGAGCAGTGGAATCGCGGCGCCTATCTGGTGCAGGGTGCCGGTCACTGTGG
CAGCTGCCACACCCCGCGCGGGCTCGGCATGCAGGAAAAGGCCCTGACCGAGGCAGACCCCCTCTATCTGAGCGGTGCAA
CGCTCGATGGCTGGTATGCCCCCAATATCCGCGGTGCCCGGTACGACAAGCAGGCGATCATCGATCTGCTGAAAACCGGC
CTCAGCCAGCATCAGGCCGTTTCTGGCCCCATGGCGGAAGTGATCACTCACAGCAGCCAGTACTTCAGCGACGCCGATCT
GGCCAGCATCGCCACCTATCTCACCGAGCTCAGTGACGACACGCCGGTGAGCAAGGGCAACCGGGCCTACGCCAGCGCGG
GCGGCAAGGCAGACTACGCCATGTACTGCTCGACCTGTCACGGGGTCAACGGTGAGGGCAATGACCACGTCATTCCTTCA
CTGGTGGGCAACCAGACTGTGCTGGCCGATGACCCCTCCAGCCTGCTCAACGTGCTGCTGCACGGCGCCGAGACCCCGAT
CACTCAGGGCCATCTCGGCTACCACATGCCAGGTTATGGCTGGACCCTCAACGACGAGCAGATGGCCGAGCTGGCCAATA
CGCTGCGCGCCTCCTGGGGCAATGAAGGAGCCGCCATCAAACCGGCAGCCGTCAAGGCCCAACGCGAGCTGCACGAGTAG

Upstream 100 bases:

>100_bases
CCAACTCCGACTCCGACTGGAGCCCCTACGCCCACTCCGCCATCGATCAGGCCTGGCGCGCGGTCAACGAGCTGGTCGCC
ATGCAAAAAGGAGGTGCCCA

Downstream 100 bases:

>100_bases
CACGACCGCGGATCTTCGCCATAAAAAACGGGCCTCCCATGGAGGCCCGTTTGCTGTGTGCCAGCAGGGCGTCAGCCCTT
GCGGGACTTGGGACCTTGGG

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MIRTLSLTATALLAAMAAQPALAGSAMSAGEYISKLGDCAACHTSEASAPLAGGKGFPTPIGTVFATNITPDKTHGIGNY
SLPEFIKVMREGVARDGHQLYPAMPYTAYAKMSDKDLEDLYHYLMKEVPPLAVANKESDIPWPLNMRWPLMGWNWLYHDD
SRFTPVAGKSEQWNRGAYLVQGAGHCGSCHTPRGLGMQEKALTEADPLYLSGATLDGWYAPNIRGARYDKQAIIDLLKTG
LSQHQAVSGPMAEVITHSSQYFSDADLASIATYLTELSDDTPVSKGNRAYASAGGKADYAMYCSTCHGVNGEGNDHVIPS
LVGNQTVLADDPSSLLNVLLHGAETPITQGHLGYHMPGYGWTLNDEQMAELANTLRASWGNEGAAIKPAAVKAQRELHE

Sequences:

>Translated_399_residues
MIRTLSLTATALLAAMAAQPALAGSAMSAGEYISKLGDCAACHTSEASAPLAGGKGFPTPIGTVFATNITPDKTHGIGNY
SLPEFIKVMREGVARDGHQLYPAMPYTAYAKMSDKDLEDLYHYLMKEVPPLAVANKESDIPWPLNMRWPLMGWNWLYHDD
SRFTPVAGKSEQWNRGAYLVQGAGHCGSCHTPRGLGMQEKALTEADPLYLSGATLDGWYAPNIRGARYDKQAIIDLLKTG
LSQHQAVSGPMAEVITHSSQYFSDADLASIATYLTELSDDTPVSKGNRAYASAGGKADYAMYCSTCHGVNGEGNDHVIPS
LVGNQTVLADDPSSLLNVLLHGAETPITQGHLGYHMPGYGWTLNDEQMAELANTLRASWGNEGAAIKPAAVKAQRELHE
>Mature_399_residues
MIRTLSLTATALLAAMAAQPALAGSAMSAGEYISKLGDCAACHTSEASAPLAGGKGFPTPIGTVFATNITPDKTHGIGNY
SLPEFIKVMREGVARDGHQLYPAMPYTAYAKMSDKDLEDLYHYLMKEVPPLAVANKESDIPWPLNMRWPLMGWNWLYHDD
SRFTPVAGKSEQWNRGAYLVQGAGHCGSCHTPRGLGMQEKALTEADPLYLSGATLDGWYAPNIRGARYDKQAIIDLLKTG
LSQHQAVSGPMAEVITHSSQYFSDADLASIATYLTELSDDTPVSKGNRAYASAGGKADYAMYCSTCHGVNGEGNDHVIPS
LVGNQTVLADDPSSLLNVLLHGAETPITQGHLGYHMPGYGWTLNDEQMAELANTLRASWGNEGAAIKPAAVKAQRELHE

Specific function: Dehydration of primary alcohols (exception:methanol) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 42844; Mature: 42844

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTLSLTATALLAAMAAQPALAGSAMSAGEYISKLGDCAACHTSEASAPLAGGKGFPTP
CCEEEHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCC
IGTVFATNITPDKTHGIGNYSLPEFIKVMREGVARDGHQLYPAMPYTAYAKMSDKDLEDL
CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCCCCCHHHH
YHYLMKEVPPLAVANKESDIPWPLNMRWPLMGWNWLYHDDSRFTPVAGKSEQWNRGAYLV
HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE
QGAGHCGSCHTPRGLGMQEKALTEADPLYLSGATLDGWYAPNIRGARYDKQAIIDLLKTG
ECCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHH
LSQHQAVSGPMAEVITHSSQYFSDADLASIATYLTELSDDTPVSKGNRAYASAGGKADYA
HHHHHHHCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCE
MYCSTCHGVNGEGNDHVIPSLVGNQTVLADDPSSLLNVLLHGAETPITQGHLGYHMPGYG
EEEHHHCCCCCCCCCCCCHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
WTLNDEQMAELANTLRASWGNEGAAIKPAAVKAQRELHE
CCCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCC
>Mature Secondary Structure
MIRTLSLTATALLAAMAAQPALAGSAMSAGEYISKLGDCAACHTSEASAPLAGGKGFPTP
CCEEEHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCC
IGTVFATNITPDKTHGIGNYSLPEFIKVMREGVARDGHQLYPAMPYTAYAKMSDKDLEDL
CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCCCCCHHHH
YHYLMKEVPPLAVANKESDIPWPLNMRWPLMGWNWLYHDDSRFTPVAGKSEQWNRGAYLV
HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE
QGAGHCGSCHTPRGLGMQEKALTEADPLYLSGATLDGWYAPNIRGARYDKQAIIDLLKTG
ECCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHH
LSQHQAVSGPMAEVITHSSQYFSDADLASIATYLTELSDDTPVSKGNRAYASAGGKADYA
HHHHHHHCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCE
MYCSTCHGVNGEGNDHVIPSLVGNQTVLADDPSSLLNVLLHGAETPITQGHLGYHMPGYG
EEEHHHCCCCCCCCCCCCHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
WTLNDEQMAELANTLRASWGNEGAAIKPAAVKAQRELHE
CCCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA