| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299876
Identifier: 145299876
GI number: 145299876
Start: 3191813
End: 3192370
Strand: Direct
Name: 145299876
Synonym: ASA_2966
Alternate gene names: NA
Gene position: 3191813-3192370 (Clockwise)
Preceding gene: 145299873
Following gene: 145299879
Centisome position: 67.88
GC content: 60.04
Gene sequence:
>558_bases GTGATCACCCTGATTAAAGAGTCGGACCAGCTGAAGATGCCCTGGAAGAACAAGCAGGGCACCACAGCCCAGATCCTCAT CTCTCCCAAGGGAGCGACTCTGGACAAACTCGACTTTGACTACCGGCTGAGCTCTGCCCCCATCAAGGAAGCCGGTGTAT TCTCCCGGTTCCCGGGTTACCAGCGCATCCTGCTGCCCGTCAGCGGCGCCGGCTTCGTGCTCAACGGCCATCCTTACGCC ACCCTTGAAGCGGCCCATTTCAGCGGGGATGACGAGACCCACTGCGCCTTGCTGAAAAAAGAGGTGACGGATCTGGGGCT CATCTACGATCCCTCGCGCATCAGCGCCAACGTACGGGTGCTCAATCTGCCGTTTCCCCTCACCCTGACCCTGGAGGCCG ACAAAACCTACCTCTGCCATCTGCTGAGCGGTCAGCTCACGGTGCAGGATCGGGCCTTGGCGGTCAACGACACCCTGGTG GTGACCGGTGAGGAGAGCATACGGCTGGAGTGCCAGAAGAAGACCGCCATCGCCTTCTTTACCCTGCAAGCCAGATAA
Upstream 100 bases:
>100_bases CGGACGGCCGCGGATAGCTGCCGCCTTGTGAGCCGCCGTGCGGAATGGTATCACTTGGCCTCATTGACCACTTCTCTCAT CCATCTGCCGAGGCGCCATT
Downstream 100 bases:
>100_bases GAGAGAGGCCCGCGCAGGCCATTGGAGACGGGATCAACGTTTGGGAGCTCGGCCACCGCTGTCGAGACAGGCCTGCATGG TGTCGTAGGGGACATAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGYQRILLPVSGAGFVLNGHPYA TLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRVLNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLV VTGEESIRLECQKKTAIAFFTLQAR
Sequences:
>Translated_185_residues MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGYQRILLPVSGAGFVLNGHPYA TLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRVLNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLV VTGEESIRLECQKKTAIAFFTLQAR >Mature_185_residues MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGYQRILLPVSGAGFVLNGHPYA TLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRVLNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLV VTGEESIRLECQKKTAIAFFTLQAR
Specific function: Unknown
COG id: COG3758
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli ydjR [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR010282 [H]
Pfam domain/function: PF05962 HutD [H]
EC number: NA
Molecular weight: Translated: 20421; Mature: 20421
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGY CEEEEECCCCEECCCCCCCCCEEEEEECCCCCEEECCCCCEEECCCCCCCCCCHHCCCCC QRILLPVSGAGFVLNGHPYATLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRV EEEEEEECCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCEEEECCCCCCEEEEE LNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLVVTGEESIRLECQKKTAIAFF EECCCCEEEEEECCCEEEEEEECCEEEEECCEEEECCEEEEECCCCEEEEEECCEEEEEE TLQAR EEEEC >Mature Secondary Structure MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGY CEEEEECCCCEECCCCCCCCCEEEEEECCCCCEEECCCCCEEECCCCCCCCCCHHCCCCC QRILLPVSGAGFVLNGHPYATLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRV EEEEEEECCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCEEEECCCCCCEEEEE LNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLVVTGEESIRLECQKKTAIAFF EECCCCEEEEEECCCEEEEEEECCEEEEECCEEEECCEEEEECCCCEEEEEECCEEEEEE TLQAR EEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2203753 [H]