Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

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The map label for this gene is 145299876

Identifier: 145299876

GI number: 145299876

Start: 3191813

End: 3192370

Strand: Direct

Name: 145299876

Synonym: ASA_2966

Alternate gene names: NA

Gene position: 3191813-3192370 (Clockwise)

Preceding gene: 145299873

Following gene: 145299879

Centisome position: 67.88

GC content: 60.04

Gene sequence:

>558_bases
GTGATCACCCTGATTAAAGAGTCGGACCAGCTGAAGATGCCCTGGAAGAACAAGCAGGGCACCACAGCCCAGATCCTCAT
CTCTCCCAAGGGAGCGACTCTGGACAAACTCGACTTTGACTACCGGCTGAGCTCTGCCCCCATCAAGGAAGCCGGTGTAT
TCTCCCGGTTCCCGGGTTACCAGCGCATCCTGCTGCCCGTCAGCGGCGCCGGCTTCGTGCTCAACGGCCATCCTTACGCC
ACCCTTGAAGCGGCCCATTTCAGCGGGGATGACGAGACCCACTGCGCCTTGCTGAAAAAAGAGGTGACGGATCTGGGGCT
CATCTACGATCCCTCGCGCATCAGCGCCAACGTACGGGTGCTCAATCTGCCGTTTCCCCTCACCCTGACCCTGGAGGCCG
ACAAAACCTACCTCTGCCATCTGCTGAGCGGTCAGCTCACGGTGCAGGATCGGGCCTTGGCGGTCAACGACACCCTGGTG
GTGACCGGTGAGGAGAGCATACGGCTGGAGTGCCAGAAGAAGACCGCCATCGCCTTCTTTACCCTGCAAGCCAGATAA

Upstream 100 bases:

>100_bases
CGGACGGCCGCGGATAGCTGCCGCCTTGTGAGCCGCCGTGCGGAATGGTATCACTTGGCCTCATTGACCACTTCTCTCAT
CCATCTGCCGAGGCGCCATT

Downstream 100 bases:

>100_bases
GAGAGAGGCCCGCGCAGGCCATTGGAGACGGGATCAACGTTTGGGAGCTCGGCCACCGCTGTCGAGACAGGCCTGCATGG
TGTCGTAGGGGACATAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGYQRILLPVSGAGFVLNGHPYA
TLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRVLNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLV
VTGEESIRLECQKKTAIAFFTLQAR

Sequences:

>Translated_185_residues
MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGYQRILLPVSGAGFVLNGHPYA
TLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRVLNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLV
VTGEESIRLECQKKTAIAFFTLQAR
>Mature_185_residues
MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGYQRILLPVSGAGFVLNGHPYA
TLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRVLNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLV
VTGEESIRLECQKKTAIAFFTLQAR

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 20421; Mature: 20421

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGY
CEEEEECCCCEECCCCCCCCCEEEEEECCCCCEEECCCCCEEECCCCCCCCCCHHCCCCC
QRILLPVSGAGFVLNGHPYATLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRV
EEEEEEECCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCEEEECCCCCCEEEEE
LNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLVVTGEESIRLECQKKTAIAFF
EECCCCEEEEEECCCEEEEEEECCEEEEECCEEEECCEEEEECCCCEEEEEECCEEEEEE
TLQAR
EEEEC
>Mature Secondary Structure
MITLIKESDQLKMPWKNKQGTTAQILISPKGATLDKLDFDYRLSSAPIKEAGVFSRFPGY
CEEEEECCCCEECCCCCCCCCEEEEEECCCCCEEECCCCCEEECCCCCCCCCCHHCCCCC
QRILLPVSGAGFVLNGHPYATLEAAHFSGDDETHCALLKKEVTDLGLIYDPSRISANVRV
EEEEEEECCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCEEEECCCCCCEEEEE
LNLPFPLTLTLEADKTYLCHLLSGQLTVQDRALAVNDTLVVTGEESIRLECQKKTAIAFF
EECCCCEEEEEECCCEEEEEEECCEEEEECCEEEECCEEEEECCCCEEEEEECCEEEEEE
TLQAR
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]