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The map label for this gene is nlpC [H]

Identifier: 145299775

GI number: 145299775

Start: 3076713

End: 3077150

Strand: Direct

Name: nlpC [H]

Synonym: ASA_2855

Alternate gene names: 145299775

Gene position: 3076713-3077150 (Clockwise)

Preceding gene: 145299773

Following gene: 145299777

Centisome position: 65.43

GC content: 62.1

Gene sequence:

>438_bases
ATGCATTGCAAGTTACTGCTGGCCCTGTTGCTGGCCGCCTGTTCCAGCACGCCCGAACCGCCGCCACCTCGTCAAAGCAG
TGCCTTCGACAGCTTTTATCAGCAGTGGCGTGGTGTGCCCTATCGCATGGGCGGATCCAGCCGGGCGGGCCTCGACTGCT
CCGCCTTCACCCAGCTTGCCTACAGCCAGGTACTGGGCTTCAACCTGCCCAGAACCACAGAATCCCAGGCCAGTCTCGGC
ACGCCGGTCGATCGCTACCGGCTGCAACACGGGGATCTGGTCTTCTTCAAGACCGGCTGGCAGCAATACCATGTCGGTGT
CTATACCGGTGCCGGAGAGTTTATCCACGCCTCCACCAGCAAGGGCGTGATCCGCTCGCGCCTCGACAATGTCTACTGGA
ACAGTCGCTACTGGCAGGCTCGCCGCCTGACGCAGTGA

Upstream 100 bases:

>100_bases
TCGACATGCCTTGTTAAAATGGGTTTTATCACGGCCAAGGCTATGTTCGAGCCCCAAACCCCGTTTATGATGAGCGAGTC
GTCGAGTCGAAGGAGCCCCC

Downstream 100 bases:

>100_bases
GCCCCGCTCGCCATGAGAAATGAGAAAGGCCCGTGACGGGCCTTTCTCATTGTTTGTCTGTTTGCAGACTCAGTGCTTGC
GATGCCAGCGCGGCGAGGTG

Product: lipoprotein

Products: NA

Alternate protein names: ORF-17 [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MHCKLLLALLLAACSSTPEPPPPRQSSAFDSFYQQWRGVPYRMGGSSRAGLDCSAFTQLAYSQVLGFNLPRTTESQASLG
TPVDRYRLQHGDLVFFKTGWQQYHVGVYTGAGEFIHASTSKGVIRSRLDNVYWNSRYWQARRLTQ

Sequences:

>Translated_145_residues
MHCKLLLALLLAACSSTPEPPPPRQSSAFDSFYQQWRGVPYRMGGSSRAGLDCSAFTQLAYSQVLGFNLPRTTESQASLG
TPVDRYRLQHGDLVFFKTGWQQYHVGVYTGAGEFIHASTSKGVIRSRLDNVYWNSRYWQARRLTQ
>Mature_145_residues
MHCKLLLALLLAACSSTPEPPPPRQSSAFDSFYQQWRGVPYRMGGSSRAGLDCSAFTQLAYSQVLGFNLPRTTESQASLG
TPVDRYRLQHGDLVFFKTGWQQYHVGVYTGAGEFIHASTSKGVIRSRLDNVYWNSRYWQARRLTQ

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788001, Length=140, Percent_Identity=48.5714285714286, Blast_Score=133, Evalue=4e-33,
Organism=Escherichia coli, GI1788501, Length=111, Percent_Identity=47.7477477477478, Blast_Score=120, Evalue=3e-29,
Organism=Escherichia coli, GI1787944, Length=122, Percent_Identity=40.1639344262295, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1786421, Length=116, Percent_Identity=36.2068965517241, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 16369; Mature: 16369

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCKLLLALLLAACSSTPEPPPPRQSSAFDSFYQQWRGVPYRMGGSSRAGLDCSAFTQLA
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH
YSQVLGFNLPRTTESQASLGTPVDRYRLQHGDLVFFKTGWQQYHVGVYTGAGEFIHASTS
HHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCEEEEEEEEECCCCEEECCCC
KGVIRSRLDNVYWNSRYWQARRLTQ
CHHHHHHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure
MHCKLLLALLLAACSSTPEPPPPRQSSAFDSFYQQWRGVPYRMGGSSRAGLDCSAFTQLA
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH
YSQVLGFNLPRTTESQASLGTPVDRYRLQHGDLVFFKTGWQQYHVGVYTGAGEFIHASTS
HHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCEEEEEEEEECCCCEEECCCC
KGVIRSRLDNVYWNSRYWQARRLTQ
CHHHHHHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]