| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299769
Identifier: 145299769
GI number: 145299769
Start: 3068422
End: 3069960
Strand: Direct
Name: 145299769
Synonym: ASA_2849
Alternate gene names: NA
Gene position: 3068422-3069960 (Clockwise)
Preceding gene: 145299768
Following gene: 145299770
Centisome position: 65.25
GC content: 59.65
Gene sequence:
>1539_bases ATGGTTTCCCGTAAGCCGTTCTATTTGCTGGTCGCCCTGCTGTTCATTGTCGGCCTGGGGATGACGTTTTATCACCACAT AGCGTTGGATGTACCGCTGACGCCGGGTGAAAAACGCCAGATCTGGTCCATCGAGGCCAAGCTCGAATTTGAAGCCACTG GTGAGCCGGTGATCGCCTCCCTGGCCATTCCTGGCACCCAGCCCGGTTTCACCCTGATGAACGAGAACGCCGCGAGCCCG GGCTACGGCCTGTCATTTGTCGAGAAGGACGGGGATGCCCGCGCCGAGTGGTCTATCCGTTCCGCCTCCGGCCGCCAGGA GCTCTACTACCGCGTCGACATGATGGCTGACGAGCATGCCAAACCGGCTGCCCTGGCAAAGCCTCCCGTCATCGAGAAGC AGATCGAGAGCGAGCCTTACGCCACCGCCATGAAGCAGATCTCCGAACGGGCCCAGGAGCGCTCCGCCGACGGTTACACC CTGACCCGCGAGATCATCAAGGAAATAGAGAAGCAGGAGCAGAACGCCGAGCTGCTGAAATCTCACAAGAGCCGGGCCAG CCTGATTGCAGAGCTGCTGAGCAACGCTGACGTCCCGGCGCGCGTGGTCCATGCACTGAGTCTGGAAGACGGCCGTCGTC GCCAGGAGCTGGTGGATTACCTGCAGGTATTCAACAGCCCGACCGACTACAAGCTGTTCAACCCGCAAACCGGTGAGCAG GGTCGCCCTGCCAATCTGCTGCTGTGGGAATACAACTCGGGCGCCCTGCTGGATGTCACCGGCGGCCACAACTCCCGGGT AACCTTCTCGATGATCGAGCAGGAACAACCTGTCAACGTGGCGCTGGCGCAGAAGTTCGAAAAGTCCGAGATGCAGAACT TCTCCATCCACAGTCTGCCGCTGGAAGAGCAGGCGCTGTTCAAAGGCTTGCTGCTGATCCCCATCGGCGTGCTGATGGTG GTGTTCCTGCGGGTTATCGTCGGTATCAAGACCTCGGGCACCTTCATGCCTGTGCTGATCGCGGTCGCCTTCATCCAGAC CTCGCTGGTTACCGGCCTGGTCGGCTTCCTGCTGATCGTCGGCACGGGTCTGGTCATCCGCTCTTATCTGTCGCGGCTCA ACCTGCTGCTGGTGGCCCGAATATCGGCGATCATCATAATGGTGATCTCGATGATCGGTATCTTCTCCGCCTTCGCTTTC AAGCTGGGACTGACCGACGGCATGAAGATCACCTTCTTCCCGATGATCATCCTCTCCTGGACCATAGAGCGGATGTCCAT TCTGTGGGAAGAAGAGGGTCCGAAAGAGGTGGTGCGTCAGGGCGGTGGTTCCCTGCTGGTGGCGGTCATCGCCTACCTGG CCATGGATAACGAGCTGATCCGTCATCTGACCTTCAACTTCCTCGGCCTGCAGCTGGTGCTGATGGCGACCGTGCTGCTG CTGGGTAACTACACCGGCTACAAGCTGAGCGAGCTCAAGCGTTTCAAGCCGCTGGTGAACGAGATCAAGTCTGGCGCCAC CCCGGGTAAGGACAAGTAA
Upstream 100 bases:
>100_bases CGTGTTGCTGGGTCGCGAATTTTTGAAAGACATCGCCGTGGTTGATGTGGCCCGCGAATATATCCAACCAAAACCCAAGC TCAAGGATGTGAAATAATCC
Downstream 100 bases:
>100_bases CAGATGTGGTTCTGGGAAAAATACACCAGCCCGTGGAGCCTGTCTCAGGCAGGCATCCTCGGCATGAACAAGCGTAACCA CTCCTACATCAGCCGCTACA
Product: gonadoliberin III-related protein
Products: NA
Alternate protein names: Membrane-Associated HD Superfamily Hydrolase; GoNADoliberin III-Like Protein; Transglutaminase-Like; Transglutaminase Domain-Containing Protein
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MVSRKPFYLLVALLFIVGLGMTFYHHIALDVPLTPGEKRQIWSIEAKLEFEATGEPVIASLAIPGTQPGFTLMNENAASP GYGLSFVEKDGDARAEWSIRSASGRQELYYRVDMMADEHAKPAALAKPPVIEKQIESEPYATAMKQISERAQERSADGYT LTREIIKEIEKQEQNAELLKSHKSRASLIAELLSNADVPARVVHALSLEDGRRRQELVDYLQVFNSPTDYKLFNPQTGEQ GRPANLLLWEYNSGALLDVTGGHNSRVTFSMIEQEQPVNVALAQKFEKSEMQNFSIHSLPLEEQALFKGLLLIPIGVLMV VFLRVIVGIKTSGTFMPVLIAVAFIQTSLVTGLVGFLLIVGTGLVIRSYLSRLNLLLVARISAIIIMVISMIGIFSAFAF KLGLTDGMKITFFPMIILSWTIERMSILWEEEGPKEVVRQGGGSLLVAVIAYLAMDNELIRHLTFNFLGLQLVLMATVLL LGNYTGYKLSELKRFKPLVNEIKSGATPGKDK
Sequences:
>Translated_512_residues MVSRKPFYLLVALLFIVGLGMTFYHHIALDVPLTPGEKRQIWSIEAKLEFEATGEPVIASLAIPGTQPGFTLMNENAASP GYGLSFVEKDGDARAEWSIRSASGRQELYYRVDMMADEHAKPAALAKPPVIEKQIESEPYATAMKQISERAQERSADGYT LTREIIKEIEKQEQNAELLKSHKSRASLIAELLSNADVPARVVHALSLEDGRRRQELVDYLQVFNSPTDYKLFNPQTGEQ GRPANLLLWEYNSGALLDVTGGHNSRVTFSMIEQEQPVNVALAQKFEKSEMQNFSIHSLPLEEQALFKGLLLIPIGVLMV VFLRVIVGIKTSGTFMPVLIAVAFIQTSLVTGLVGFLLIVGTGLVIRSYLSRLNLLLVARISAIIIMVISMIGIFSAFAF KLGLTDGMKITFFPMIILSWTIERMSILWEEEGPKEVVRQGGGSLLVAVIAYLAMDNELIRHLTFNFLGLQLVLMATVLL LGNYTGYKLSELKRFKPLVNEIKSGATPGKDK >Mature_512_residues MVSRKPFYLLVALLFIVGLGMTFYHHIALDVPLTPGEKRQIWSIEAKLEFEATGEPVIASLAIPGTQPGFTLMNENAASP GYGLSFVEKDGDARAEWSIRSASGRQELYYRVDMMADEHAKPAALAKPPVIEKQIESEPYATAMKQISERAQERSADGYT LTREIIKEIEKQEQNAELLKSHKSRASLIAELLSNADVPARVVHALSLEDGRRRQELVDYLQVFNSPTDYKLFNPQTGEQ GRPANLLLWEYNSGALLDVTGGHNSRVTFSMIEQEQPVNVALAQKFEKSEMQNFSIHSLPLEEQALFKGLLLIPIGVLMV VFLRVIVGIKTSGTFMPVLIAVAFIQTSLVTGLVGFLLIVGTGLVIRSYLSRLNLLLVARISAIIIMVISMIGIFSAFAF KLGLTDGMKITFFPMIILSWTIERMSILWEEEGPKEVVRQGGGSLLVAVIAYLAMDNELIRHLTFNFLGLQLVLMATVLL LGNYTGYKLSELKRFKPLVNEIKSGATPGKDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56790; Mature: 56790
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRKPFYLLVALLFIVGLGMTFYHHIALDVPLTPGEKRQIWSIEAKLEFEATGEPVIAS CCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEEEEEECCCCCEEEE LAIPGTQPGFTLMNENAASPGYGLSFVEKDGDARAEWSIRSASGRQELYYRVDMMADEHA EECCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCHHHHEEEEHHHCCCC KPAALAKPPVIEKQIESEPYATAMKQISERAQERSADGYTLTREIIKEIEKQEQNAELLK CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SHKSRASLIAELLSNADVPARVVHALSLEDGRRRQELVDYLQVFNSPTDYKLFNPQTGEQ HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCC GRPANLLLWEYNSGALLDVTGGHNSRVTFSMIEQEQPVNVALAQKFEKSEMQNFSIHSLP CCCCEEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEECCC LEEQALFKGLLLIPIGVLMVVFLRVIVGIKTSGTFMPVLIAVAFIQTSLVTGLVGFLLIV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GTGLVIRSYLSRLNLLLVARISAIIIMVISMIGIFSAFAFKLGLTDGMKITFFPMIILSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TIERMSILWEEEGPKEVVRQGGGSLLVAVIAYLAMDNELIRHLTFNFLGLQLVLMATVLL HHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGNYTGYKLSELKRFKPLVNEIKSGATPGKDK HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVSRKPFYLLVALLFIVGLGMTFYHHIALDVPLTPGEKRQIWSIEAKLEFEATGEPVIAS CCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEEEEEECCCCCEEEE LAIPGTQPGFTLMNENAASPGYGLSFVEKDGDARAEWSIRSASGRQELYYRVDMMADEHA EECCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCHHHHEEEEHHHCCCC KPAALAKPPVIEKQIESEPYATAMKQISERAQERSADGYTLTREIIKEIEKQEQNAELLK CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SHKSRASLIAELLSNADVPARVVHALSLEDGRRRQELVDYLQVFNSPTDYKLFNPQTGEQ HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCC GRPANLLLWEYNSGALLDVTGGHNSRVTFSMIEQEQPVNVALAQKFEKSEMQNFSIHSLP CCCCEEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEECCC LEEQALFKGLLLIPIGVLMVVFLRVIVGIKTSGTFMPVLIAVAFIQTSLVTGLVGFLLIV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GTGLVIRSYLSRLNLLLVARISAIIIMVISMIGIFSAFAFKLGLTDGMKITFFPMIILSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TIERMSILWEEEGPKEVVRQGGGSLLVAVIAYLAMDNELIRHLTFNFLGLQLVLMATVLL HHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGNYTGYKLSELKRFKPLVNEIKSGATPGKDK HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA